RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
COL9A1-202ENST00000357250 TAF7LQ5H9L4 462 aa14.54□□□□□ -0.08
COL9A1-202ENST00000357250 SLC4A10Q6U841 1118 aa14.53□□□□□ -0.08
COL9A1-202ENST00000357250 DDX19BQ9UMR2 479 aa14.53□□□□□ -0.08
COL9A1-202ENST00000357250 FANCIQ9NVI1 1328 aa14.53□□□□□ -0.08
COL9A1-202ENST00000357250 BCL2L13Q9BXK5 485 aa14.53□□□□□ -0.08
COL9A1-202ENST00000357250 CFAP70Q5T0N1 1121 aa14.53□□□□□ -0.08
COL9A1-202ENST00000357250 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
COL9A1-202ENST00000357250 GZF1Q9H116 711 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-202ENST00000357250 TROQ12816 1431 aaPredicted RBP14.52□□□□□ -0.08
COL9A1-202ENST00000357250 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
COL9A1-202ENST00000357250 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
COL9A1-202ENST00000357250 API5Q9BZZ5 524 aaKnown RBP14.52□□□□□ -0.09
COL9A1-202ENST00000357250 EPRSP07814 1512 aaKnown RBP14.51□□□□□ -0.09
COL9A1-202ENST00000357250 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
COL9A1-202ENST00000357250 LRRFIP1Q32MZ4 808 aaKnown RBP14.5□□□□□ -0.09
COL9A1-202ENST00000357250 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
COL9A1-202ENST00000357250 TMX4Q9H1E5 349 aaPredicted RBP14.5□□□□□ -0.09
COL9A1-202ENST00000357250 HFM1A2PYH4 1435 aa14.5□□□□□ -0.09
COL9A1-202ENST00000357250 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
COL9A1-202ENST00000357250 LAMC3Q9Y6N6 1575 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 ELL2O00472 640 aaPredicted RBP14.49□□□□□ -0.09
COL9A1-202ENST00000357250 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 APAF1O14727 1248 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 REC8O95072 547 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 NAIPQ13075 1403 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
COL9A1-202ENST00000357250 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
COL9A1-202ENST00000357250 RUFY2Q8WXA3 655 aa14.47□□□□□ -0.09
COL9A1-202ENST00000357250 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
COL9A1-202ENST00000357250 EHBP1L1Q8N3D4 1523 aa14.47□□□□□ -0.09
COL9A1-202ENST00000357250 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
COL9A1-202ENST00000357250 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
COL9A1-202ENST00000357250 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL9A1-202ENST00000357250 ISY1Q9ULR0 285 aaKnown RBP14.47□□□□□ -0.09
COL9A1-202ENST00000357250 BRD4O60885 1362 aaPredicted RBP14.46□□□□□ -0.09
COL9A1-202ENST00000357250 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
COL9A1-202ENST00000357250 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
COL9A1-202ENST00000357250 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
COL9A1-202ENST00000357250 ANKRD45Q5TZF3 282 aa14.46□□□□□ -0.09
COL9A1-202ENST00000357250 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.09
COL9A1-202ENST00000357250 DAPK1P53355 1430 aa14.46□□□□□ -0.1
COL9A1-202ENST00000357250 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
COL9A1-202ENST00000357250 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
COL9A1-202ENST00000357250 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
COL9A1-202ENST00000357250 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
COL9A1-202ENST00000357250 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
COL9A1-202ENST00000357250 TEFQ10587 303 aa14.44□□□□□ -0.1
COL9A1-202ENST00000357250 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
COL9A1-202ENST00000357250 SF3A1Q15459 793 aaKnown RBP14.43□□□□□ -0.1
COL9A1-202ENST00000357250 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
COL9A1-202ENST00000357250 GNAI1P63096 354 aa14.42□□□□□ -0.1
COL9A1-202ENST00000357250 GSE1Q14687 1217 aa14.42□□□□□ -0.1
COL9A1-202ENST00000357250 GGNBP2Q9H3C7 697 aa14.42□□□□□ -0.1
COL9A1-202ENST00000357250 DDX49Q9Y6V7 483 aaKnown RBP14.42□□□□□ -0.1
COL9A1-202ENST00000357250 CPLX2Q6PUV4 134 aaKnown RBP14.42□□□□□ -0.1
COL9A1-202ENST00000357250 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-202ENST00000357250 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
COL9A1-202ENST00000357250 HSP90AB4PQ58FF6 505 aa14.41□□□□□ -0.1
COL9A1-202ENST00000357250 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
COL9A1-202ENST00000357250 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-202ENST00000357250 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
COL9A1-202ENST00000357250 DIAPH3Q9NSV4 1193 aa14.41□□□□□ -0.1
COL9A1-202ENST00000357250 KIAA1107Q9UPP5 1409 aa14.4□□□□□ -0.1
COL9A1-202ENST00000357250 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
COL9A1-202ENST00000357250 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
COL9A1-202ENST00000357250 H3BQV1 296 aa14.39□□□□□ -0.11
COL9A1-202ENST00000357250 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
COL9A1-202ENST00000357250 FAM184AQ8NB25 1140 aa14.39□□□□□ -0.11
COL9A1-202ENST00000357250 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
COL9A1-202ENST00000357250 RIPK4P57078 832 aa14.39□□□□□ -0.11
COL9A1-202ENST00000357250 TPM3P06753 285 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 CDCA7LQ96GN5 454 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 RASSF8Q8NHQ8 419 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 CLSTN1O94985 981 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 GOLGA6L1Q8N7Z2 621 aa14.38□□□□□ -0.11
COL9A1-202ENST00000357250 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
COL9A1-202ENST00000357250 RNF20Q5VTR2 975 aa14.37□□□□□ -0.11
COL9A1-202ENST00000357250 NUCB2P80303 420 aa14.37□□□□□ -0.11
COL9A1-202ENST00000357250 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
COL9A1-202ENST00000357250 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
COL9A1-202ENST00000357250 ABCC5O15440 1437 aa14.37□□□□□ -0.11
COL9A1-202ENST00000357250 GOLGA6L19H0YKK7 550 aa14.36□□□□□ -0.11
COL9A1-202ENST00000357250 INTS3Q68E01 1043 aaKnown RBP14.36□□□□□ -0.11
COL9A1-202ENST00000357250 TTC5Q8N0Z6 440 aa14.36□□□□□ -0.11
COL9A1-202ENST00000357250 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
COL9A1-202ENST00000357250 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
COL9A1-202ENST00000357250 C9orf78Q9NZ63 289 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-202ENST00000357250 GTF2E1P29083 439 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-202ENST00000357250 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
COL9A1-202ENST00000357250 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
COL9A1-202ENST00000357250 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
COL9A1-202ENST00000357250 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
COL9A1-202ENST00000357250 NOC3LQ8WTT2 800 aaKnown RBP14.34□□□□□ -0.11
COL9A1-202ENST00000357250 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
COL9A1-202ENST00000357250 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-202ENST00000357250 BECN2A8MW95 431 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms