RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.73
RXRA-201ENST00000356384 MSH5O43196 834 aa19.64■□□□□ 0.73
RXRA-201ENST00000356384 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 ANKRD20A12PQ8NF67 263 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 CCDC47Q96A33 483 aaKnown RBP19.63■□□□□ 0.73
RXRA-201ENST00000356384 TRIM34Q9BYJ4 488 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 APPP05067 770 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
RXRA-201ENST00000356384 CPLX1O14810 134 aa19.62■□□□□ 0.73
RXRA-201ENST00000356384 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
RXRA-201ENST00000356384 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
RXRA-201ENST00000356384 NOL10Q9BSC4 688 aaKnown RBP19.62■□□□□ 0.73
RXRA-201ENST00000356384 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
RXRA-201ENST00000356384 DHX16O60231 1041 aaKnown RBP19.62■□□□□ 0.73
RXRA-201ENST00000356384 CRBNQ96SW2 442 aa19.62■□□□□ 0.73
RXRA-201ENST00000356384 RUFY2Q8WXA3 655 aa19.62■□□□□ 0.73
RXRA-201ENST00000356384 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
RXRA-201ENST00000356384 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
RXRA-201ENST00000356384 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
RXRA-201ENST00000356384 LRRFIP1Q32MZ4 808 aaKnown RBP19.61■□□□□ 0.73
RXRA-201ENST00000356384 PANK3Q9H999 370 aa19.61■□□□□ 0.73
RXRA-201ENST00000356384 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
RXRA-201ENST00000356384 FAM13BQ9NYF5 915 aa19.6■□□□□ 0.73
RXRA-201ENST00000356384 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
RXRA-201ENST00000356384 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
RXRA-201ENST00000356384 TEFQ10587 303 aa19.59■□□□□ 0.73
RXRA-201ENST00000356384 TEX35Q5T0J7 233 aa19.59■□□□□ 0.73
RXRA-201ENST00000356384 REC8O95072 547 aa19.59■□□□□ 0.73
RXRA-201ENST00000356384 E9PSI1 815 aa19.59■□□□□ 0.73
RXRA-201ENST00000356384 FMN1Q68DA7 1419 aa19.58■□□□□ 0.73
RXRA-201ENST00000356384 IFIT2P09913 472 aaKnown RBP19.58■□□□□ 0.72
RXRA-201ENST00000356384 COG3Q96JB2 828 aa19.58■□□□□ 0.72
RXRA-201ENST00000356384 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
RXRA-201ENST00000356384 RRP12Q5JTH9 1297 aaKnown RBP19.57■□□□□ 0.72
RXRA-201ENST00000356384 NECTIN2Q92692 538 aa19.57■□□□□ 0.72
RXRA-201ENST00000356384 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
RXRA-201ENST00000356384 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
RXRA-201ENST00000356384 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
RXRA-201ENST00000356384 EVA1CP58658 441 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 FOSBP53539 338 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 NAP1L1P55209 391 aaKnown RBP19.55■□□□□ 0.72
RXRA-201ENST00000356384 TRDNQ13061 729 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
RXRA-201ENST00000356384 CGNL1Q0VF96 1302 aa19.53■□□□□ 0.72
RXRA-201ENST00000356384 KRI1Q8N9T8 703 aaKnown RBP19.53■□□□□ 0.72
RXRA-201ENST00000356384 CALRP27797 417 aaKnown RBP19.53■□□□□ 0.72
RXRA-201ENST00000356384 VPS37DQ86XT2 251 aa19.53■□□□□ 0.72
RXRA-201ENST00000356384 RUFY1Q96T51 708 aa19.53■□□□□ 0.72
RXRA-201ENST00000356384 SASS6Q6UVJ0 657 aa19.53■□□□□ 0.72
RXRA-201ENST00000356384 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
RXRA-201ENST00000356384 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
RXRA-201ENST00000356384 RNF20Q5VTR2 975 aa19.52■□□□□ 0.71
RXRA-201ENST00000356384 CCDC43Q96MW1 224 aaKnown RBP19.51■□□□□ 0.71
RXRA-201ENST00000356384 BCL11BQ9C0K0 894 aaPredicted RBP19.51■□□□□ 0.71
RXRA-201ENST00000356384 CHMP5Q9NZZ3 219 aa19.51■□□□□ 0.71
RXRA-201ENST00000356384 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
RXRA-201ENST00000356384 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
RXRA-201ENST00000356384 SMC3Q9UQE7 1217 aa19.51■□□□□ 0.71
RXRA-201ENST00000356384 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
RXRA-201ENST00000356384 MNS1Q8NEH6 495 aa19.5■□□□□ 0.71
RXRA-201ENST00000356384 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
RXRA-201ENST00000356384 ERICH2A1L162 156 aa19.5■□□□□ 0.71
RXRA-201ENST00000356384 APAF1O14727 1248 aa19.49■□□□□ 0.71
RXRA-201ENST00000356384 CT47A1Q5JQC4 288 aaPredicted RBP19.49■□□□□ 0.71
RXRA-201ENST00000356384 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
RXRA-201ENST00000356384 AK7Q96M32 723 aa19.49■□□□□ 0.71
RXRA-201ENST00000356384 G3BP1Q13283 466 aaKnown RBP eCLIP19.49■□□□□ 0.713e-8■□□□□ 8
RXRA-201ENST00000356384 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
RXRA-201ENST00000356384 CDR1P51861 262 aa19.48■□□□□ 0.71
RXRA-201ENST00000356384 SYTL4Q96C24 671 aaPredicted RBP19.48■□□□□ 0.71
RXRA-201ENST00000356384 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.47■□□□□ 0.71
RXRA-201ENST00000356384 CCDC73Q6ZRK6 1079 aa19.47■□□□□ 0.71
RXRA-201ENST00000356384 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
RXRA-201ENST00000356384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.47■□□□□ 0.714e-7■■■■■ 316.3
RXRA-201ENST00000356384 ARGLU1Q9NWB6 273 aaPredicted RBP19.47■□□□□ 0.71
RXRA-201ENST00000356384 DZIP1LQ8IYY4 767 aaKnown RBP19.46■□□□□ 0.71
RXRA-201ENST00000356384 FKBP5Q13451 457 aaPredicted RBP19.46■□□□□ 0.71
RXRA-201ENST00000356384 KLHL34Q8N239 644 aa19.46■□□□□ 0.71
RXRA-201ENST00000356384 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
RXRA-201ENST00000356384 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
RXRA-201ENST00000356384 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
RXRA-201ENST00000356384 SAFBQ15424 915 aaKnown RBP eCLIP19.45■□□□□ 0.7
RXRA-201ENST00000356384 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
RXRA-201ENST00000356384 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
RXRA-201ENST00000356384 ACBD3Q9H3P7 528 aa19.44■□□□□ 0.7
RXRA-201ENST00000356384 MINK1Q8N4C8 1332 aaPredicted RBP19.44■□□□□ 0.7
RXRA-201ENST00000356384 RIPK4P57078 832 aa19.44■□□□□ 0.7
RXRA-201ENST00000356384 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
RXRA-201ENST00000356384 HSP90B2PQ58FF3 399 aa19.44■□□□□ 0.7
RXRA-201ENST00000356384 NUCB2P80303 420 aa19.43■□□□□ 0.7
RXRA-201ENST00000356384 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
RXRA-201ENST00000356384 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
RXRA-201ENST00000356384 PRKRIP1Q9H875 184 aaPredicted RBP19.42■□□□□ 0.7
RXRA-201ENST00000356384 PDILTQ8N807 584 aa19.42■□□□□ 0.7
RXRA-201ENST00000356384 CWC22Q9HCG8 908 aaKnown RBP19.42■□□□□ 0.7
RXRA-201ENST00000356384 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms