RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 ZFYVE27Q5T4F4 411 aa10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 RALBP1Q15311 655 aa10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 GOLGA6L3A6NEY3 463 aa10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 NESP48681 1621 aa10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 C9orf78Q9NZ63 289 aaPredicted RBP10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
SH3PXD2A-202ENST00000355946 CCDC173Q0VFZ6 552 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 RUFY2Q8WXA3 655 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 KAT6BQ8WYB5 2073 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 TEFQ10587 303 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 IKQ13123 557 aaPredicted RBP10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 EFCAB2Q5VUJ9 269 aa10.3□□□□□ -0.76
SH3PXD2A-202ENST00000355946 ANKRD30AQ9BXX3 1397 aa10.29□□□□□ -0.76
SH3PXD2A-202ENST00000355946 SAFBQ15424 915 aaKnown RBP eCLIP10.29□□□□□ -0.76
SH3PXD2A-202ENST00000355946 COG3Q96JB2 828 aa10.29□□□□□ -0.76
SH3PXD2A-202ENST00000355946 PPP1R1BQ9UD71 204 aaPredicted RBP10.28□□□□□ -0.76
SH3PXD2A-202ENST00000355946 DDX58O95786 925 aaKnown RBP10.28□□□□□ -0.76
SH3PXD2A-202ENST00000355946 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
SH3PXD2A-202ENST00000355946 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
SH3PXD2A-202ENST00000355946 ZKSCAN1P17029 563 aaPredicted RBP10.28□□□□□ -0.76
SH3PXD2A-202ENST00000355946 DCTN1Q14203 1278 aa10.27□□□□□ -0.76
SH3PXD2A-202ENST00000355946 CENPJQ9HC77 1338 aaPredicted RBP10.27□□□□□ -0.77
SH3PXD2A-202ENST00000355946 DDX11L8A8MPP1 907 aa10.27□□□□□ -0.77
SH3PXD2A-202ENST00000355946 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
SH3PXD2A-202ENST00000355946 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
SH3PXD2A-202ENST00000355946 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
SH3PXD2A-202ENST00000355946 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 OFD1O75665 1012 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 PKD2Q13563 968 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 ATF3P18847 181 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 PHLDB1Q86UU1 1377 aa10.26□□□□□ -0.77
SH3PXD2A-202ENST00000355946 IFIT2P09913 472 aaKnown RBP10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 PSME1Q06323 249 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 TEX35Q5T0J7 233 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 NUP155O75694 1391 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 ACBD3Q9H3P7 528 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 XBP1P17861 261 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 NGEFQ8N5V2 710 aa10.25□□□□□ -0.77
SH3PXD2A-202ENST00000355946 ANKRD18AQ8IVF6 992 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 PPM1FP49593 454 aaPredicted RBP10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CCDC97Q96F63 343 aaPredicted RBP10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 SYCP1Q15431 976 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 FOXD4L5Q5VV16 416 aaPredicted RBP10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 DESP17661 470 aa10.24□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CCDC191Q8NCU4 936 aa10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 SYNJ1O43426 1573 aa10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 KIF3BO15066 747 aa10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
SH3PXD2A-202ENST00000355946 FYB1O15117 783 aa10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.778e-8■■■□□ 15.7
SH3PXD2A-202ENST00000355946 NUTM2DQ5VT03 806 aaPredicted RBP10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CCDC18Q5T9S5 1454 aa10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 FGD5Q6ZNL6 1462 aa10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 DNAI2Q9GZS0 605 aa10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
SH3PXD2A-202ENST00000355946 REC8O95072 547 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 VPS8Q8N3P4 1428 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 IGF1RP08069 1367 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
SH3PXD2A-202ENST00000355946 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.78
SH3PXD2A-202ENST00000355946 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.78
SH3PXD2A-202ENST00000355946 SIN3AQ96ST3 1273 aa10.21□□□□□ -0.78
SH3PXD2A-202ENST00000355946 MAP7D2Q96T17 732 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 FMN1Q68DA7 1419 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 NEBLO76041 1014 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 ZNF771Q7L3S4 317 aaPredicted RBP10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 EVC2Q86UK5 1308 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 EIF2S2P20042 333 aaKnown RBP10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
SH3PXD2A-202ENST00000355946 NAT10Q9H0A0 1025 aaKnown RBP10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 OLFM4Q6UX06 510 aa10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 KRT18P05783 430 aaKnown RBP10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 KIF6Q6ZMV9 814 aa10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 EZRP15311 586 aaKnown RBP10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 ERC2O15083 957 aa10.19□□□□□ -0.78
SH3PXD2A-202ENST00000355946 SKOR2Q2VWA4 1001 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms