RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 STK26Q9P289 416 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 CFAP43Q8NDM7 1665 aa11.18□□□□□ -0.62
RBFOX1-203ENST00000355637 CDCA8Q53HL2 280 aa11.18□□□□□ -0.62
RBFOX1-203ENST00000355637 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-203ENST00000355637 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
RBFOX1-203ENST00000355637 CARD10Q9BWT7 1032 aa11.17□□□□□ -0.62
RBFOX1-203ENST00000355637 GOLIM4O00461 696 aa11.17□□□□□ -0.62
RBFOX1-203ENST00000355637 CLSTN1O94985 981 aa11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 RBM25P49756 843 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 TOMM22Q9NS69 142 aa11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 GEMIN8Q9NWZ8 242 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 NUDCQ9Y266 331 aa11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 PTPRKQ15262 1439 aa11.16□□□□□ -0.62
RBFOX1-203ENST00000355637 MCCP23508 829 aa11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 UACAQ9BZF9 1416 aa11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 IRF6O14896 467 aa11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-203ENST00000355637 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 MCM4P33991 863 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 HFM1A2PYH4 1435 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 PANK3Q9H999 370 aa11.14□□□□□ -0.63
RBFOX1-203ENST00000355637 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
RBFOX1-203ENST00000355637 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-203ENST00000355637 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
RBFOX1-203ENST00000355637 CAPN2P17655 700 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 PSMD1Q99460 953 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 DNAJC5BQ9UF47 199 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 CUL7Q14999 1698 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 NAIPQ13075 1403 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
RBFOX1-203ENST00000355637 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 U2AF2P26368 475 aaKnown RBP eCLIP11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 CT47A1Q5JQC4 288 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 SH3BP1Q9Y3L3 701 aa11.11□□□□□ -0.63
RBFOX1-203ENST00000355637 GAS2L3Q86XJ1 694 aa11.1□□□□□ -0.63
RBFOX1-203ENST00000355637 PDCL2Q8N4E4 241 aa11.1□□□□□ -0.63
RBFOX1-203ENST00000355637 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
RBFOX1-203ENST00000355637 RSPH14Q9UHP6 348 aa11.1□□□□□ -0.63
RBFOX1-203ENST00000355637 ZNF500O60304 480 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-203ENST00000355637 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
RBFOX1-203ENST00000355637 YY1AP1Q9H869 796 aa11.09□□□□□ -0.63
RBFOX1-203ENST00000355637 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
RBFOX1-203ENST00000355637 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-203ENST00000355637 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
RBFOX1-203ENST00000355637 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
RBFOX1-203ENST00000355637 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
RBFOX1-203ENST00000355637 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
RBFOX1-203ENST00000355637 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
RBFOX1-203ENST00000355637 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
RBFOX1-203ENST00000355637 CALCOCO1Q9P1Z2 691 aa11.06□□□□□ -0.64
RBFOX1-203ENST00000355637 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
RBFOX1-203ENST00000355637 SMC4Q9NTJ3 1288 aa11.06□□□□□ -0.64
RBFOX1-203ENST00000355637 PLIN1O60240 522 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 PRDM16Q9HAZ2 1276 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
RBFOX1-203ENST00000355637 DNAJC21Q5F1R6 531 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 TDO2P48775 406 aa11.04□□□□□ -0.64
RBFOX1-203ENST00000355637 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
RBFOX1-203ENST00000355637 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
RBFOX1-203ENST00000355637 C8orf34Q49A92 452 aa11.02□□□□□ -0.64
RBFOX1-203ENST00000355637 CALR3Q96L12 384 aaKnown RBP11.02□□□□□ -0.64
RBFOX1-203ENST00000355637 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.64
RBFOX1-203ENST00000355637 SATB1Q01826 763 aa11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 MAP2K1Q02750 393 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 FBLN2P98095 1184 aa11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-203ENST00000355637 ANAPC15P60006 121 aa11.01□□□□□ -0.65
RBFOX1-203ENST00000355637 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-203ENST00000355637 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
RBFOX1-203ENST00000355637 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms