RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 PPP1R15AO75807 674 aaPredicted RBP30.23■■■□□ 2.43
HCFC1R1-202ENST00000354679 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
HCFC1R1-202ENST00000354679 PLEKHG1Q9ULL1 1385 aa30.21■■■□□ 2.43
HCFC1R1-202ENST00000354679 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.21■■■□□ 2.43
HCFC1R1-202ENST00000354679 BCANQ96GW7 911 aa30.2■■■□□ 2.43
HCFC1R1-202ENST00000354679 CLTCL1P53675 1640 aa30.2■■■□□ 2.43
HCFC1R1-202ENST00000354679 SLC26A8Q96RN1 970 aa30.19■■■□□ 2.42
HCFC1R1-202ENST00000354679 UBAP1LF5GYI3 381 aa30.17■■■□□ 2.42
HCFC1R1-202ENST00000354679 NUTM2DQ5VT03 806 aaPredicted RBP30.16■■■□□ 2.42
HCFC1R1-202ENST00000354679 SENP3Q9H4L4 574 aaPredicted RBP30.16■■■□□ 2.42
HCFC1R1-202ENST00000354679 LRRC7Q96NW7 1537 aa30.16■■■□□ 2.42
HCFC1R1-202ENST00000354679 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
HCFC1R1-202ENST00000354679 ZNF326Q5BKZ1 582 aaKnown RBP30.12■■■□□ 2.41
HCFC1R1-202ENST00000354679 MPHOSPH9Q99550 1183 aa30.12■■■□□ 2.41
HCFC1R1-202ENST00000354679 FOXD1Q16676 465 aa30.11■■■□□ 2.41
HCFC1R1-202ENST00000354679 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
HCFC1R1-202ENST00000354679 KCNA6P17658 529 aa30.1■■■□□ 2.41
HCFC1R1-202ENST00000354679 KIF1BO60333 1816 aa30.09■■■□□ 2.41
HCFC1R1-202ENST00000354679 TBX22Q9Y458 520 aa30.06■■■□□ 2.4
HCFC1R1-202ENST00000354679 ADAMTS13Q76LX8 1427 aa30.05■■■□□ 2.4
HCFC1R1-202ENST00000354679 TOM1O60784 492 aa30.05■■■□□ 2.4
HCFC1R1-202ENST00000354679 NWD1Q149M9 1564 aa30.05■■■□□ 2.4
HCFC1R1-202ENST00000354679 DIP2AQ14689 1571 aa30.04■■■□□ 2.4
HCFC1R1-202ENST00000354679 NEXMIFQ5QGS0 1516 aa30.03■■■□□ 2.4
HCFC1R1-202ENST00000354679 NKTRP30414 1462 aaKnown RBP30.01■■■□□ 2.4
HCFC1R1-202ENST00000354679 CCDC144AA2RUR9 1427 aa30■■■□□ 2.39
HCFC1R1-202ENST00000354679 XIRP1Q702N8 1843 aaKnown RBP29.99■■■□□ 2.39
HCFC1R1-202ENST00000354679 TMEM94Q12767 1356 aa29.99■■■□□ 2.39
HCFC1R1-202ENST00000354679 CHD2O14647 1828 aaKnown RBP29.99■■■□□ 2.39
HCFC1R1-202ENST00000354679 PROSER2Q86WR7 435 aaPredicted RBP29.98■■■□□ 2.39
HCFC1R1-202ENST00000354679 SETBP1Q9Y6X0 1596 aa29.98■■■□□ 2.39
HCFC1R1-202ENST00000354679 SCAF1Q9H7N4 1312 aaKnown RBP29.97■■■□□ 2.39
HCFC1R1-202ENST00000354679 ALKQ9UM73 1620 aa29.97■■■□□ 2.39
HCFC1R1-202ENST00000354679 PIP4K2BP78356 416 aa29.97■■■□□ 2.39
HCFC1R1-202ENST00000354679 NRXN3Q9Y4C0 1643 aa29.96■■■□□ 2.39
HCFC1R1-202ENST00000354679 PIK3R4Q99570 1358 aa29.96■■■□□ 2.39
HCFC1R1-202ENST00000354679 RPGRIP1LQ68CZ1 1315 aa29.94■■■□□ 2.38
HCFC1R1-202ENST00000354679 HRCP23327 699 aa29.92■■■□□ 2.38
HCFC1R1-202ENST00000354679 RBM33Q96EV2 1170 aaKnown RBP29.91■■■□□ 2.38
HCFC1R1-202ENST00000354679 VGFO15240 615 aaPredicted RBP29.9■■■□□ 2.38
HCFC1R1-202ENST00000354679 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
HCFC1R1-202ENST00000354679 PTPRUQ92729 1446 aa29.88■■■□□ 2.37
HCFC1R1-202ENST00000354679 PPLO60437 1756 aa29.87■■■□□ 2.37
HCFC1R1-202ENST00000354679 AMOTL2Q9Y2J4 779 aa29.85■■■□□ 2.37
HCFC1R1-202ENST00000354679 RGL3Q3MIN7 710 aa29.84■■■□□ 2.37
HCFC1R1-202ENST00000354679 METP08581 1390 aa29.84■■■□□ 2.37
HCFC1R1-202ENST00000354679 MSH6P52701 1360 aa29.82■■■□□ 2.36
HCFC1R1-202ENST00000354679 NCOA3Q9Y6Q9 1424 aa29.81■■■□□ 2.36
HCFC1R1-202ENST00000354679 HSPA1LP34931 641 aa29.81■■■□□ 2.36
HCFC1R1-202ENST00000354679 XRN1Q8IZH2 1706 aaKnown RBP29.8■■■□□ 2.36
HCFC1R1-202ENST00000354679 ANKRD30BQ9BXX2 1392 aa29.77■■■□□ 2.36
HCFC1R1-202ENST00000354679 IFT172Q9UG01 1749 aa29.76■■■□□ 2.36
HCFC1R1-202ENST00000354679 C14orf37Q86TY3 774 aa29.76■■■□□ 2.35
HCFC1R1-202ENST00000354679 SETD1AO15047 1707 aaKnown RBP29.76■■■□□ 2.35
HCFC1R1-202ENST00000354679 ADGRF5Q8IZF2 1346 aa29.75■■■□□ 2.35
HCFC1R1-202ENST00000354679 FAM135BQ49AJ0 1406 aa29.71■■■□□ 2.35
HCFC1R1-202ENST00000354679 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
HCFC1R1-202ENST00000354679 SLAIN2Q9P270 581 aa29.67■■■□□ 2.34
HCFC1R1-202ENST00000354679 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.67■■■□□ 2.34
HCFC1R1-202ENST00000354679 PIK3C2GO75747 1445 aa29.66■■■□□ 2.34
HCFC1R1-202ENST00000354679 ROBO1Q9Y6N7 1651 aa29.66■■■□□ 2.34
HCFC1R1-202ENST00000354679 PTCH1Q13635 1447 aa29.65■■■□□ 2.34
HCFC1R1-202ENST00000354679 ATF3P18847 181 aa29.64■■■□□ 2.34
HCFC1R1-202ENST00000354679 CADPS2Q86UW7 1296 aa29.64■■■□□ 2.34
HCFC1R1-202ENST00000354679 MYOM2P54296 1465 aa29.63■■■□□ 2.33
HCFC1R1-202ENST00000354679 PRAG1Q86YV5 1406 aa29.62■■■□□ 2.33
HCFC1R1-202ENST00000354679 DCCP43146 1447 aa29.62■■■□□ 2.33
HCFC1R1-202ENST00000354679 ROBO2Q9HCK4 1378 aa29.61■■■□□ 2.33
HCFC1R1-202ENST00000354679 NRXN1Q9ULB1 1477 aa29.61■■■□□ 2.33
HCFC1R1-202ENST00000354679 ADGRL3Q9HAR2 1447 aa29.6■■■□□ 2.33
HCFC1R1-202ENST00000354679 DISP3Q9P2K9 1392 aa29.57■■■□□ 2.32
HCFC1R1-202ENST00000354679 ASXL1Q8IXJ9 1541 aa29.56■■■□□ 2.32
HCFC1R1-202ENST00000354679 NALCNQ8IZF0 1738 aa29.56■■■□□ 2.32
HCFC1R1-202ENST00000354679 LRPPRCP42704 1394 aaKnown RBP29.54■■■□□ 2.32
HCFC1R1-202ENST00000354679 C14orf93Q9H972 538 aaKnown RBP29.54■■■□□ 2.32
HCFC1R1-202ENST00000354679 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
HCFC1R1-202ENST00000354679 STK26Q9P289 416 aa29.52■■■□□ 2.32
HCFC1R1-202ENST00000354679 TECPR2O15040 1411 aa29.52■■■□□ 2.32
HCFC1R1-202ENST00000354679 LAMC1P11047 1609 aa29.51■■■□□ 2.31
HCFC1R1-202ENST00000354679 CFAP70Q5T0N1 1121 aa29.5■■■□□ 2.31
HCFC1R1-202ENST00000354679 DCAF11Q8TEB1 546 aa29.5■■■□□ 2.31
HCFC1R1-202ENST00000354679 MST1RQ04912 1400 aa29.5■■■□□ 2.31
HCFC1R1-202ENST00000354679 YTHDC2Q9H6S0 1430 aaKnown RBP29.49■■■□□ 2.31
HCFC1R1-202ENST00000354679 KDM2AQ9Y2K7 1162 aa29.49■■■□□ 2.31
HCFC1R1-202ENST00000354679 ABCC11Q96J66 1382 aa29.49■■■□□ 2.31
HCFC1R1-202ENST00000354679 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
HCFC1R1-202ENST00000354679 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
HCFC1R1-202ENST00000354679 MED1Q15648 1581 aaPredicted RBP29.47■■■□□ 2.31
HCFC1R1-202ENST00000354679 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
HCFC1R1-202ENST00000354679 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
HCFC1R1-202ENST00000354679 STAC3Q96MF2 364 aa29.46■■■□□ 2.31
HCFC1R1-202ENST00000354679 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
HCFC1R1-202ENST00000354679 AHDC1Q5TGY3 1603 aaPredicted RBP29.42■■■□□ 2.3
HCFC1R1-202ENST00000354679 WAPLQ7Z5K2 1190 aa29.42■■■□□ 2.3
HCFC1R1-202ENST00000354679 COL16A1Q07092 1604 aaPredicted RBP29.4■■■□□ 2.3
HCFC1R1-202ENST00000354679 PLEKHH1Q9ULM0 1364 aa29.39■■■□□ 2.3
HCFC1R1-202ENST00000354679 C1orf167Q5SNV9 1468 aa29.39■■■□□ 2.3
HCFC1R1-202ENST00000354679 SIRT1Q96EB6 747 aa29.38■■■□□ 2.29
HCFC1R1-202ENST00000354679 ADGRB1O14514 1584 aa29.38■■■□□ 2.29
HCFC1R1-202ENST00000354679 CDC42BPGQ6DT37 1551 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms