RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
LMBR1-201ENST00000353442 COG3Q96JB2 828 aa16.5■□□□□ 0.23
LMBR1-201ENST00000353442 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
LMBR1-201ENST00000353442 ATF3P18847 181 aa16.49■□□□□ 0.23
LMBR1-201ENST00000353442 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
LMBR1-201ENST00000353442 TRDNQ13061 729 aa16.48■□□□□ 0.23
LMBR1-201ENST00000353442 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
LMBR1-201ENST00000353442 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
LMBR1-201ENST00000353442 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
LMBR1-201ENST00000353442 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
LMBR1-201ENST00000353442 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
LMBR1-201ENST00000353442 WASHC4Q2M389 1173 aa16.46■□□□□ 0.22
LMBR1-201ENST00000353442 RBM5P52756 815 aaKnown RBP eCLIP16.45■□□□□ 0.22
LMBR1-201ENST00000353442 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
LMBR1-201ENST00000353442 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
LMBR1-201ENST00000353442 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
LMBR1-201ENST00000353442 TTLL5Q6EMB2 1281 aa16.44■□□□□ 0.22
LMBR1-201ENST00000353442 ANKRD20A12PQ8NF67 263 aa16.44■□□□□ 0.22
LMBR1-201ENST00000353442 PHF14O94880 888 aa16.44■□□□□ 0.22
LMBR1-201ENST00000353442 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
LMBR1-201ENST00000353442 NUP155O75694 1391 aa16.43■□□□□ 0.22
LMBR1-201ENST00000353442 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
LMBR1-201ENST00000353442 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
LMBR1-201ENST00000353442 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
LMBR1-201ENST00000353442 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
LMBR1-201ENST00000353442 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
LMBR1-201ENST00000353442 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
LMBR1-201ENST00000353442 AK7Q96M32 723 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
LMBR1-201ENST00000353442 OFD1O75665 1012 aa16.4■□□□□ 0.22
LMBR1-201ENST00000353442 G3BP1Q13283 466 aaKnown RBP eCLIP16.4■□□□□ 0.22
LMBR1-201ENST00000353442 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
LMBR1-201ENST00000353442 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
LMBR1-201ENST00000353442 CALRP27797 417 aaKnown RBP16.38■□□□□ 0.21
LMBR1-201ENST00000353442 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
LMBR1-201ENST00000353442 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
LMBR1-201ENST00000353442 ANKRD62A6NC57 917 aa16.37■□□□□ 0.21
LMBR1-201ENST00000353442 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
LMBR1-201ENST00000353442 RUFY1Q96T51 708 aa16.36■□□□□ 0.21
LMBR1-201ENST00000353442 MPHOSPH10O00566 681 aaKnown RBP16.36■□□□□ 0.21
LMBR1-201ENST00000353442 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-201ENST00000353442 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-201ENST00000353442 PDILTQ8N807 584 aa16.36■□□□□ 0.21
LMBR1-201ENST00000353442 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
LMBR1-201ENST00000353442 MATR3P43243 847 aaKnown RBP eCLIP16.35■□□□□ 0.211e-6■■■■□ 21.9
LMBR1-201ENST00000353442 ZHX3Q9H4I2 956 aa16.35■□□□□ 0.21
LMBR1-201ENST00000353442 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
LMBR1-201ENST00000353442 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
LMBR1-201ENST00000353442 GPS2Q13227 327 aa16.34■□□□□ 0.21
LMBR1-201ENST00000353442 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
LMBR1-201ENST00000353442 DDX49Q9Y6V7 483 aaKnown RBP16.34■□□□□ 0.21
LMBR1-201ENST00000353442 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.21
LMBR1-201ENST00000353442 RUFY2Q8WXA3 655 aa16.33■□□□□ 0.2
LMBR1-201ENST00000353442 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
LMBR1-201ENST00000353442 NEFHP12036 1026 aa16.33■□□□□ 0.2
LMBR1-201ENST00000353442 CDK5RAP3Q96JB5 506 aa16.32■□□□□ 0.2
LMBR1-201ENST00000353442 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
LMBR1-201ENST00000353442 RALYLQ86SE5 291 aaKnown RBP16.32■□□□□ 0.2
LMBR1-201ENST00000353442 NEBLO76041 1014 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 ZSCAN29Q8IWY8 852 aaPredicted RBP16.31■□□□□ 0.2
LMBR1-201ENST00000353442 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
LMBR1-201ENST00000353442 PDCL3Q9H2J4 239 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 GRM1Q13255 1194 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 SYCP1Q15431 976 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 CAGE1Q8TC20 777 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 PLCD4Q9BRC7 762 aa16.31■□□□□ 0.2
LMBR1-201ENST00000353442 HMOX1P09601 288 aa16.3■□□□□ 0.2
LMBR1-201ENST00000353442 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
LMBR1-201ENST00000353442 BRPF1P55201 1214 aaPredicted RBP16.3■□□□□ 0.2
LMBR1-201ENST00000353442 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
LMBR1-201ENST00000353442 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
LMBR1-201ENST00000353442 RALBP1Q15311 655 aa16.29■□□□□ 0.2
LMBR1-201ENST00000353442 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
LMBR1-201ENST00000353442 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
LMBR1-201ENST00000353442 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
LMBR1-201ENST00000353442 WASHC2AQ641Q2 1341 aa16.28■□□□□ 0.2
LMBR1-201ENST00000353442 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
LMBR1-201ENST00000353442 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
LMBR1-201ENST00000353442 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.2
LMBR1-201ENST00000353442 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.22e-6■■■■■ 59.6
LMBR1-201ENST00000353442 FAM161AQ3B820 660 aa16.27■□□□□ 0.19
LMBR1-201ENST00000353442 EEA1Q15075 1411 aa16.27■□□□□ 0.19
LMBR1-201ENST00000353442 CA8P35219 290 aa16.27■□□□□ 0.19
LMBR1-201ENST00000353442 MAP7D2Q96T17 732 aa16.27■□□□□ 0.19
LMBR1-201ENST00000353442 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
LMBR1-201ENST00000353442 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
LMBR1-201ENST00000353442 RNF20Q5VTR2 975 aa16.25■□□□□ 0.19
LMBR1-201ENST00000353442 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
LMBR1-201ENST00000353442 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
LMBR1-201ENST00000353442 RDXP35241 583 aaKnown RBP16.24■□□□□ 0.19
LMBR1-201ENST00000353442 CUX2O14529 1486 aa16.24■□□□□ 0.19
LMBR1-201ENST00000353442 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
LMBR1-201ENST00000353442 PANK3Q9H999 370 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms