RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
COL11A1-201ENST00000353414 SOGA1O94964 1423 aa12.27□□□□□ -0.44
COL11A1-201ENST00000353414 ST18O60284 1047 aa12.27□□□□□ -0.45
COL11A1-201ENST00000353414 MPHOSPH9Q99550 1183 aa12.27□□□□□ -0.45
COL11A1-201ENST00000353414 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 BECN2A8MW95 431 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 ATP2B2Q01814 1243 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 COG3Q96JB2 828 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 CT47A1Q5JQC4 288 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-201ENST00000353414 EEA1Q15075 1411 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
COL11A1-201ENST00000353414 HMOX1P09601 288 aa12.25□□□□□ -0.45
COL11A1-201ENST00000353414 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
COL11A1-201ENST00000353414 ZNF771Q7L3S4 317 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-201ENST00000353414 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
COL11A1-201ENST00000353414 FHAD1B1AJZ9 1412 aa12.24□□□□□ -0.45
COL11A1-201ENST00000353414 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
COL11A1-201ENST00000353414 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
COL11A1-201ENST00000353414 IFIT2P09913 472 aaKnown RBP12.23□□□□□ -0.45
COL11A1-201ENST00000353414 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
COL11A1-201ENST00000353414 CPLX1O14810 134 aa12.23□□□□□ -0.45
COL11A1-201ENST00000353414 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
COL11A1-201ENST00000353414 HSP90AA2PQ14568 343 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-201ENST00000353414 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-201ENST00000353414 ERICH2A1L162 156 aa12.22□□□□□ -0.45
COL11A1-201ENST00000353414 TPM1P09493 284 aa12.22□□□□□ -0.45
COL11A1-201ENST00000353414 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
COL11A1-201ENST00000353414 R3HCC1Q9Y3T6 440 aaKnown RBP12.22□□□□□ -0.45
COL11A1-201ENST00000353414 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
COL11A1-201ENST00000353414 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.45
COL11A1-201ENST00000353414 EPS15P42566 896 aa12.21□□□□□ -0.45
COL11A1-201ENST00000353414 PANK3Q9H999 370 aa12.21□□□□□ -0.45
COL11A1-201ENST00000353414 PHF14O94880 888 aa12.21□□□□□ -0.46
COL11A1-201ENST00000353414 BICD2Q8TD16 824 aa12.21□□□□□ -0.46
COL11A1-201ENST00000353414 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 ATP2B1P20020 1258 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 ATF3P18847 181 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 PPM1FP49593 454 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-201ENST00000353414 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
COL11A1-201ENST00000353414 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-201ENST00000353414 TRDNQ13061 729 aa12.19□□□□□ -0.46
COL11A1-201ENST00000353414 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
COL11A1-201ENST00000353414 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
COL11A1-201ENST00000353414 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
COL11A1-201ENST00000353414 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL11A1-201ENST00000353414 FKBP5Q13451 457 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-201ENST00000353414 PDILTQ8N807 584 aa12.18□□□□□ -0.46
COL11A1-201ENST00000353414 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
COL11A1-201ENST00000353414 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
COL11A1-201ENST00000353414 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
COL11A1-201ENST00000353414 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
COL11A1-201ENST00000353414 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
COL11A1-201ENST00000353414 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
COL11A1-201ENST00000353414 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-201ENST00000353414 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
COL11A1-201ENST00000353414 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL11A1-201ENST00000353414 RALBP1Q15311 655 aa12.17□□□□□ -0.46
COL11A1-201ENST00000353414 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-201ENST00000353414 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
COL11A1-201ENST00000353414 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
COL11A1-201ENST00000353414 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
COL11A1-201ENST00000353414 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
COL11A1-201ENST00000353414 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
COL11A1-201ENST00000353414 RIPK4P57078 832 aa12.14□□□□□ -0.47
COL11A1-201ENST00000353414 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
COL11A1-201ENST00000353414 CEBPZQ03701 1054 aaKnown RBP12.14□□□□□ -0.47
COL11A1-201ENST00000353414 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL11A1-201ENST00000353414 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-201ENST00000353414 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
COL11A1-201ENST00000353414 CPLX2Q6PUV4 134 aaKnown RBP12.13□□□□□ -0.47
COL11A1-201ENST00000353414 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
COL11A1-201ENST00000353414 ANKRD30AQ9BXX3 1397 aa12.13□□□□□ -0.47
COL11A1-201ENST00000353414 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
COL11A1-201ENST00000353414 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-201ENST00000353414 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
COL11A1-201ENST00000353414 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
COL11A1-201ENST00000353414 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
COL11A1-201ENST00000353414 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
COL11A1-201ENST00000353414 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
COL11A1-201ENST00000353414 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
COL11A1-201ENST00000353414 EXOC6Q8TAG9 804 aa12.11□□□□□ -0.47
COL11A1-201ENST00000353414 CCDC97Q96F63 343 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-201ENST00000353414 PLCD4Q9BRC7 762 aa12.11□□□□□ -0.47
COL11A1-201ENST00000353414 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
COL11A1-201ENST00000353414 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
COL11A1-201ENST00000353414 WIZO95785 1651 aa12.11□□□□□ -0.47
COL11A1-201ENST00000353414 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-201ENST00000353414 MATR3P43243 847 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL11A1-201ENST00000353414 APAF1O14727 1248 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms