RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
UBE3C-201ENST00000348165 FKBP5Q13451 457 aaPredicted RBP23■■□□□ 1.27
UBE3C-201ENST00000348165 KIF16BQ96L93 1317 aa23■■□□□ 1.27
UBE3C-201ENST00000348165 SLC4A3P48751 1232 aa22.99■■□□□ 1.27
UBE3C-201ENST00000348165 DZIP1LQ8IYY4 767 aaKnown RBP22.99■■□□□ 1.27
UBE3C-201ENST00000348165 NESP48681 1621 aa22.99■■□□□ 1.27
UBE3C-201ENST00000348165 FAM161AQ3B820 660 aa22.99■■□□□ 1.27
UBE3C-201ENST00000348165 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
UBE3C-201ENST00000348165 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
UBE3C-201ENST00000348165 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
UBE3C-201ENST00000348165 DDX19BQ9UMR2 479 aa22.98■■□□□ 1.27
UBE3C-201ENST00000348165 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
UBE3C-201ENST00000348165 MSH5O43196 834 aa22.97■■□□□ 1.27
UBE3C-201ENST00000348165 RASSF8Q8NHQ8 419 aa22.97■■□□□ 1.27
UBE3C-201ENST00000348165 API5Q9BZZ5 524 aaKnown RBP22.97■■□□□ 1.27
UBE3C-201ENST00000348165 NLRP6P59044 892 aa22.96■■□□□ 1.27
UBE3C-201ENST00000348165 FYCO1Q9BQS8 1478 aa22.96■■□□□ 1.27
UBE3C-201ENST00000348165 HSP90AA2PQ14568 343 aaPredicted RBP22.96■■□□□ 1.27
UBE3C-201ENST00000348165 ATF3P18847 181 aa22.96■■□□□ 1.27
UBE3C-201ENST00000348165 KIAA2012Q0VF49 1180 aa22.96■■□□□ 1.27
UBE3C-201ENST00000348165 ARAP1Q96P48 1450 aa22.95■■□□□ 1.27
UBE3C-201ENST00000348165 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
UBE3C-201ENST00000348165 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
UBE3C-201ENST00000348165 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
UBE3C-201ENST00000348165 NLRP2Q9NX02 1062 aa22.94■■□□□ 1.26
UBE3C-201ENST00000348165 MTHFSP49914 203 aa22.94■■□□□ 1.26
UBE3C-201ENST00000348165 CCDC34Q96HJ3 373 aa22.93■■□□□ 1.26
UBE3C-201ENST00000348165 DIAPH3Q9NSV4 1193 aa22.93■■□□□ 1.26
UBE3C-201ENST00000348165 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
UBE3C-201ENST00000348165 FOXD4L6Q3SYB3 417 aaPredicted RBP22.93■■□□□ 1.26
UBE3C-201ENST00000348165 FOXD4L3Q6VB84 417 aaPredicted RBP22.93■■□□□ 1.26
UBE3C-201ENST00000348165 GOLGA6L3A6NEY3 463 aa22.92■■□□□ 1.26
UBE3C-201ENST00000348165 CFTRP13569 1480 aa22.92■■□□□ 1.26
UBE3C-201ENST00000348165 GNAI1P63096 354 aa22.92■■□□□ 1.26
UBE3C-201ENST00000348165 WASHC2AQ641Q2 1341 aa22.92■■□□□ 1.26
UBE3C-201ENST00000348165 SF3A1Q15459 793 aaKnown RBP22.92■■□□□ 1.26
UBE3C-201ENST00000348165 KIF3AQ9Y496 699 aa22.91■■□□□ 1.26
UBE3C-201ENST00000348165 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
UBE3C-201ENST00000348165 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
UBE3C-201ENST00000348165 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
UBE3C-201ENST00000348165 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
UBE3C-201ENST00000348165 CSPP1Q1MSJ5 1256 aa22.9■■□□□ 1.26
UBE3C-201ENST00000348165 CREBRFQ8IUR6 639 aa22.89■■□□□ 1.26
UBE3C-201ENST00000348165 IFIT2P09913 472 aaKnown RBP22.88■■□□□ 1.25
UBE3C-201ENST00000348165 ARID3AQ99856 593 aa22.88■■□□□ 1.25
UBE3C-201ENST00000348165 MIA2Q96PC5 1412 aa22.87■■□□□ 1.25
UBE3C-201ENST00000348165 TPM4P67936 248 aa22.87■■□□□ 1.25
UBE3C-201ENST00000348165 H3BQV1 296 aa22.86■■□□□ 1.25
UBE3C-201ENST00000348165 IFFO2Q5TF58 517 aa22.86■■□□□ 1.25
UBE3C-201ENST00000348165 AIMP1Q12904 312 aaKnown RBP22.86■■□□□ 1.25
UBE3C-201ENST00000348165 FAM184AQ8NB25 1140 aa22.86■■□□□ 1.25
UBE3C-201ENST00000348165 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
UBE3C-201ENST00000348165 PANK1Q8TE04 598 aa22.85■■□□□ 1.25
UBE3C-201ENST00000348165 MARCH6O60337 910 aa22.85■■□□□ 1.25
UBE3C-201ENST00000348165 G3BP1Q13283 466 aaKnown RBP eCLIP22.85■■□□□ 1.25
UBE3C-201ENST00000348165 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
UBE3C-201ENST00000348165 TCP11L2Q8N4U5 519 aa22.84■■□□□ 1.25
UBE3C-201ENST00000348165 LNPKQ9C0E8 428 aa22.84■■□□□ 1.25
UBE3C-201ENST00000348165 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
UBE3C-201ENST00000348165 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
UBE3C-201ENST00000348165 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
UBE3C-201ENST00000348165 VPS53Q5VIR6 699 aa22.83■■□□□ 1.25
UBE3C-201ENST00000348165 RUFY2Q8WXA3 655 aa22.83■■□□□ 1.25
UBE3C-201ENST00000348165 SLC12A5Q9H2X9 1139 aa22.83■■□□□ 1.24
UBE3C-201ENST00000348165 REC8O95072 547 aa22.83■■□□□ 1.24
UBE3C-201ENST00000348165 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
UBE3C-201ENST00000348165 APPP05067 770 aa22.82■■□□□ 1.24
UBE3C-201ENST00000348165 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
UBE3C-201ENST00000348165 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
UBE3C-201ENST00000348165 ZKSCAN1P17029 563 aaPredicted RBP22.81■■□□□ 1.24
UBE3C-201ENST00000348165 ANO2Q9NQ90 1003 aa22.81■■□□□ 1.24
UBE3C-201ENST00000348165 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
UBE3C-201ENST00000348165 CDCA7LQ96GN5 454 aa22.81■■□□□ 1.24
UBE3C-201ENST00000348165 LRRFIP1Q32MZ4 808 aaKnown RBP22.8■■□□□ 1.24
UBE3C-201ENST00000348165 RIC3Q7Z5B4 369 aa22.8■■□□□ 1.24
UBE3C-201ENST00000348165 DDX49Q9Y6V7 483 aaKnown RBP22.8■■□□□ 1.24
UBE3C-201ENST00000348165 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
UBE3C-201ENST00000348165 AKAP17AQ02040 695 aaKnown RBP22.79■■□□□ 1.24
UBE3C-201ENST00000348165 PPP2R1AP30153 589 aa22.79■■□□□ 1.24
UBE3C-201ENST00000348165 MCTP1Q6DN14 999 aa22.79■■□□□ 1.24
UBE3C-201ENST00000348165 PROSER2Q86WR7 435 aaPredicted RBP22.79■■□□□ 1.24
UBE3C-201ENST00000348165 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
UBE3C-201ENST00000348165 TNNT3P45378 269 aaPredicted RBP22.78■■□□□ 1.24
UBE3C-201ENST00000348165 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
UBE3C-201ENST00000348165 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
UBE3C-201ENST00000348165 VPS37DQ86XT2 251 aa22.78■■□□□ 1.24
UBE3C-201ENST00000348165 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
UBE3C-201ENST00000348165 SYNE3Q6ZMZ3 975 aa22.77■■□□□ 1.24
UBE3C-201ENST00000348165 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
UBE3C-201ENST00000348165 ROCK1Q13464 1354 aa22.77■■□□□ 1.24
UBE3C-201ENST00000348165 RAD21O60216 631 aa22.76■■□□□ 1.23
UBE3C-201ENST00000348165 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
UBE3C-201ENST00000348165 DDX11L8A8MPP1 907 aa22.75■■□□□ 1.23
UBE3C-201ENST00000348165 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
UBE3C-201ENST00000348165 CPLX2Q6PUV4 134 aaKnown RBP22.75■■□□□ 1.23
UBE3C-201ENST00000348165 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
UBE3C-201ENST00000348165 PHF14O94880 888 aa22.75■■□□□ 1.23
UBE3C-201ENST00000348165 ATP6V1DQ9Y5K8 247 aa22.75■■□□□ 1.23
UBE3C-201ENST00000348165 GPRASP1Q5JY77 1395 aa22.75■■□□□ 1.23
UBE3C-201ENST00000348165 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms