RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 KCNA6P17658 529 aa30.14■■■□□ 2.42
CEACAM3-201ENST00000344550 PPP1R15AO75807 674 aaPredicted RBP30.12■■■□□ 2.41
CEACAM3-201ENST00000344550 CHGAP10645 457 aaKnown RBP30.11■■■□□ 2.41
CEACAM3-201ENST00000344550 SPHKAPQ2M3C7 1700 aa30.1■■■□□ 2.41
CEACAM3-201ENST00000344550 SLC26A8Q96RN1 970 aa30.09■■■□□ 2.41
CEACAM3-201ENST00000344550 MYO5BQ9ULV0 1848 aa30.09■■■□□ 2.41
CEACAM3-201ENST00000344550 TBX22Q9Y458 520 aa30.08■■■□□ 2.41
CEACAM3-201ENST00000344550 BCANQ96GW7 911 aa30.07■■■□□ 2.4
CEACAM3-201ENST00000344550 TRIM52Q96A61 297 aa30.06■■■□□ 2.4
CEACAM3-201ENST00000344550 TRPM2O94759 1503 aa30.05■■■□□ 2.4
CEACAM3-201ENST00000344550 NKTRP30414 1462 aaKnown RBP30.05■■■□□ 2.4
CEACAM3-201ENST00000344550 NWD1Q149M9 1564 aa30.03■■■□□ 2.4
CEACAM3-201ENST00000344550 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
CEACAM3-201ENST00000344550 SLC4A1APQ9BWU0 796 aaKnown RBP30.01■■■□□ 2.39
CEACAM3-201ENST00000344550 DIP2AQ14689 1571 aa30.01■■■□□ 2.39
CEACAM3-201ENST00000344550 PIP4K2BP78356 416 aa29.99■■■□□ 2.39
CEACAM3-201ENST00000344550 ALKQ9UM73 1620 aa29.98■■■□□ 2.39
CEACAM3-201ENST00000344550 PROSER2Q86WR7 435 aaPredicted RBP29.97■■■□□ 2.39
CEACAM3-201ENST00000344550 TMEM94Q12767 1356 aa29.97■■■□□ 2.39
CEACAM3-201ENST00000344550 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
CEACAM3-201ENST00000344550 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
CEACAM3-201ENST00000344550 NCOA3Q9Y6Q9 1424 aa29.95■■■□□ 2.38
CEACAM3-201ENST00000344550 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
CEACAM3-201ENST00000344550 XIRP1Q702N8 1843 aaKnown RBP29.93■■■□□ 2.38
CEACAM3-201ENST00000344550 CLTCL1P53675 1640 aa29.93■■■□□ 2.38
CEACAM3-201ENST00000344550 ZNF326Q5BKZ1 582 aaKnown RBP29.92■■■□□ 2.38
CEACAM3-201ENST00000344550 HSPA1LP34931 641 aa29.9■■■□□ 2.38
CEACAM3-201ENST00000344550 RPGRIP1LQ68CZ1 1315 aa29.89■■■□□ 2.38
CEACAM3-201ENST00000344550 SETBP1Q9Y6X0 1596 aa29.89■■■□□ 2.38
CEACAM3-201ENST00000344550 KIF1BO60333 1816 aa29.89■■■□□ 2.38
CEACAM3-201ENST00000344550 NUTM2DQ5VT03 806 aaPredicted RBP29.88■■■□□ 2.37
CEACAM3-201ENST00000344550 MPHOSPH9Q99550 1183 aa29.86■■■□□ 2.37
CEACAM3-201ENST00000344550 FAM135BQ49AJ0 1406 aa29.86■■■□□ 2.37
CEACAM3-201ENST00000344550 SETD5Q9C0A6 1442 aa29.86■■■□□ 2.37
CEACAM3-201ENST00000344550 MSH6P52701 1360 aa29.85■■■□□ 2.37
CEACAM3-201ENST00000344550 VGFO15240 615 aaPredicted RBP29.84■■■□□ 2.37
CEACAM3-201ENST00000344550 NEXMIFQ5QGS0 1516 aa29.84■■■□□ 2.37
CEACAM3-201ENST00000344550 DISP3Q9P2K9 1392 aa29.82■■■□□ 2.36
CEACAM3-201ENST00000344550 SENP3Q9H4L4 574 aaPredicted RBP29.79■■■□□ 2.36
CEACAM3-201ENST00000344550 AMOTL2Q9Y2J4 779 aa29.79■■■□□ 2.36
CEACAM3-201ENST00000344550 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
CEACAM3-201ENST00000344550 CCDC144AA2RUR9 1427 aa29.78■■■□□ 2.36
CEACAM3-201ENST00000344550 C19orf44Q9H6X5 657 aa29.75■■■□□ 2.35
CEACAM3-201ENST00000344550 HRCP23327 699 aa29.74■■■□□ 2.35
CEACAM3-201ENST00000344550 RBM33Q96EV2 1170 aaKnown RBP29.74■■■□□ 2.35
CEACAM3-201ENST00000344550 PTPRUQ92729 1446 aa29.73■■■□□ 2.35
CEACAM3-201ENST00000344550 SLAIN2Q9P270 581 aa29.73■■■□□ 2.35
CEACAM3-201ENST00000344550 CADPS2Q86UW7 1296 aa29.72■■■□□ 2.35
CEACAM3-201ENST00000344550 FOXD1Q16676 465 aa29.71■■■□□ 2.35
CEACAM3-201ENST00000344550 METP08581 1390 aa29.7■■■□□ 2.35
CEACAM3-201ENST00000344550 RAB3GAP2Q9H2M9 1393 aa29.7■■■□□ 2.35
CEACAM3-201ENST00000344550 XRN1Q8IZH2 1706 aaKnown RBP29.7■■■□□ 2.34
CEACAM3-201ENST00000344550 C14orf37Q86TY3 774 aa29.69■■■□□ 2.34
CEACAM3-201ENST00000344550 DCCP43146 1447 aa29.68■■■□□ 2.34
CEACAM3-201ENST00000344550 SPATA31E1Q6ZUB1 1445 aa29.68■■■□□ 2.34
CEACAM3-201ENST00000344550 ANKRD30BQ9BXX2 1392 aa29.67■■■□□ 2.34
CEACAM3-201ENST00000344550 ATF3P18847 181 aa29.66■■■□□ 2.34
CEACAM3-201ENST00000344550 PPLO60437 1756 aa29.64■■■□□ 2.34
CEACAM3-201ENST00000344550 PRAG1Q86YV5 1406 aa29.64■■■□□ 2.34
CEACAM3-201ENST00000344550 ROBO1Q9Y6N7 1651 aa29.63■■■□□ 2.33
CEACAM3-201ENST00000344550 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.6■■■□□ 2.33
CEACAM3-201ENST00000344550 MED1Q15648 1581 aaPredicted RBP29.6■■■□□ 2.33
CEACAM3-201ENST00000344550 PTCH1Q13635 1447 aa29.59■■■□□ 2.33
CEACAM3-201ENST00000344550 SETD1AO15047 1707 aaKnown RBP29.57■■■□□ 2.32
CEACAM3-201ENST00000344550 RGL3Q3MIN7 710 aa29.56■■■□□ 2.32
CEACAM3-201ENST00000344550 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
CEACAM3-201ENST00000344550 IFT172Q9UG01 1749 aa29.51■■■□□ 2.32
CEACAM3-201ENST00000344550 ADGRF5Q8IZF2 1346 aa29.51■■■□□ 2.32
CEACAM3-201ENST00000344550 ILDR2Q71H61 639 aa29.5■■■□□ 2.31
CEACAM3-201ENST00000344550 PIK3C2GO75747 1445 aa29.47■■■□□ 2.31
CEACAM3-201ENST00000344550 ROBO2Q9HCK4 1378 aa29.47■■■□□ 2.31
CEACAM3-201ENST00000344550 STAC3Q96MF2 364 aa29.46■■■□□ 2.31
CEACAM3-201ENST00000344550 JCADQ9P266 1359 aa29.46■■■□□ 2.31
CEACAM3-201ENST00000344550 MST1RQ04912 1400 aa29.45■■■□□ 2.31
CEACAM3-201ENST00000344550 AHDC1Q5TGY3 1603 aaPredicted RBP29.45■■■□□ 2.31
CEACAM3-201ENST00000344550 PHF23Q9BUL5 403 aaPredicted RBP29.45■■■□□ 2.31
CEACAM3-201ENST00000344550 PHLPP1O60346 1717 aa29.45■■■□□ 2.3
CEACAM3-201ENST00000344550 MYOM2P54296 1465 aa29.44■■■□□ 2.3
CEACAM3-201ENST00000344550 BRINP3Q76B58 766 aa29.44■■■□□ 2.3
CEACAM3-201ENST00000344550 TECPR2O15040 1411 aa29.44■■■□□ 2.3
CEACAM3-201ENST00000344550 NRXN1Q9ULB1 1477 aa29.43■■■□□ 2.3
CEACAM3-201ENST00000344550 ABCC11Q96J66 1382 aa29.43■■■□□ 2.3
CEACAM3-201ENST00000344550 LRPPRCP42704 1394 aaKnown RBP29.42■■■□□ 2.3
CEACAM3-201ENST00000344550 SOCS7O14512 581 aa29.41■■■□□ 2.3
CEACAM3-201ENST00000344550 C14orf93Q9H972 538 aaKnown RBP29.41■■■□□ 2.3
CEACAM3-201ENST00000344550 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
CEACAM3-201ENST00000344550 COL16A1Q07092 1604 aaPredicted RBP29.4■■■□□ 2.3
CEACAM3-201ENST00000344550 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
CEACAM3-201ENST00000344550 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
CEACAM3-201ENST00000344550 SPATA31A6Q5VVP1 1343 aa29.36■■■□□ 2.29
CEACAM3-201ENST00000344550 LAMC1P11047 1609 aa29.35■■■□□ 2.29
CEACAM3-201ENST00000344550 C1orf167Q5SNV9 1468 aa29.33■■■□□ 2.29
CEACAM3-201ENST00000344550 KNDC1Q76NI1 1749 aa29.32■■■□□ 2.28
CEACAM3-201ENST00000344550 YTHDC2Q9H6S0 1430 aaKnown RBP29.32■■■□□ 2.28
CEACAM3-201ENST00000344550 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
CEACAM3-201ENST00000344550 TMEM132EQ6IEE7 984 aa29.3■■■□□ 2.28
CEACAM3-201ENST00000344550 CDC42BPGQ6DT37 1551 aa29.3■■■□□ 2.28
CEACAM3-201ENST00000344550 LRRC59Q96AG4 307 aaKnown RBP29.29■■■□□ 2.28
CEACAM3-201ENST00000344550 STK26Q9P289 416 aa29.29■■■□□ 2.28
CEACAM3-201ENST00000344550 NHSL1Q5SYE7 1610 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms