RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 CEP170BQ9Y4F5 1589 aaPredicted RBP23.38■■□□□ 1.33
SNED1-202ENST00000342631 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
SNED1-202ENST00000342631 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
SNED1-202ENST00000342631 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
SNED1-202ENST00000342631 VGFO15240 615 aaPredicted RBP23.36■■□□□ 1.33
SNED1-202ENST00000342631 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
SNED1-202ENST00000342631 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
SNED1-202ENST00000342631 THEMISQ8N1K5 641 aaPredicted RBP23.35■■□□□ 1.33
SNED1-202ENST00000342631 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
SNED1-202ENST00000342631 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
SNED1-202ENST00000342631 TMEM2Q9UHN6 1383 aa23.33■■□□□ 1.32
SNED1-202ENST00000342631 RIMS2Q9UQ26 1411 aa23.32■■□□□ 1.32
SNED1-202ENST00000342631 NBPF8Q3BBV2 869 aa23.31■■□□□ 1.32
SNED1-202ENST00000342631 SLIT1O75093 1534 aa23.31■■□□□ 1.32
SNED1-202ENST00000342631 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
SNED1-202ENST00000342631 RALGAPBQ86X10 1494 aa23.28■■□□□ 1.32
SNED1-202ENST00000342631 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
SNED1-202ENST00000342631 ADGRF5Q8IZF2 1346 aa23.27■■□□□ 1.32
SNED1-202ENST00000342631 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
SNED1-202ENST00000342631 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
SNED1-202ENST00000342631 EID1Q9Y6B2 187 aa23.25■■□□□ 1.31
SNED1-202ENST00000342631 LAMC1P11047 1609 aa23.23■■□□□ 1.31
SNED1-202ENST00000342631 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.31
SNED1-202ENST00000342631 TXNDC2Q86VQ3 553 aa23.2■■□□□ 1.3
SNED1-202ENST00000342631 ROCK2O75116 1388 aaKnown RBP23.2■■□□□ 1.3
SNED1-202ENST00000342631 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
SNED1-202ENST00000342631 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
SNED1-202ENST00000342631 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
SNED1-202ENST00000342631 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
SNED1-202ENST00000342631 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
SNED1-202ENST00000342631 LTKP29376 864 aa23.17■■□□□ 1.3
SNED1-202ENST00000342631 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
SNED1-202ENST00000342631 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
SNED1-202ENST00000342631 CARD11Q9BXL7 1154 aa23.14■■□□□ 1.3
SNED1-202ENST00000342631 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
SNED1-202ENST00000342631 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
SNED1-202ENST00000342631 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
SNED1-202ENST00000342631 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
SNED1-202ENST00000342631 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
SNED1-202ENST00000342631 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
SNED1-202ENST00000342631 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
SNED1-202ENST00000342631 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
SNED1-202ENST00000342631 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
SNED1-202ENST00000342631 MED14O60244 1454 aa23.1■■□□□ 1.29
SNED1-202ENST00000342631 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
SNED1-202ENST00000342631 BCANQ96GW7 911 aa23.08■■□□□ 1.28
SNED1-202ENST00000342631 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
SNED1-202ENST00000342631 USP47Q96K76 1375 aa23.07■■□□□ 1.28
SNED1-202ENST00000342631 TBX22Q9Y458 520 aa23.06■■□□□ 1.28
SNED1-202ENST00000342631 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
SNED1-202ENST00000342631 ASXL1Q8IXJ9 1541 aa23.04■■□□□ 1.28
SNED1-202ENST00000342631 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
SNED1-202ENST00000342631 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
SNED1-202ENST00000342631 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
SNED1-202ENST00000342631 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
SNED1-202ENST00000342631 YTHDC2Q9H6S0 1430 aaKnown RBP23.01■■□□□ 1.27
SNED1-202ENST00000342631 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
SNED1-202ENST00000342631 HSPA2P54652 639 aa22.99■■□□□ 1.27
SNED1-202ENST00000342631 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
SNED1-202ENST00000342631 METP08581 1390 aa22.99■■□□□ 1.27
SNED1-202ENST00000342631 ZNF316A6NFI3 1004 aaPredicted RBP22.98■■□□□ 1.27
SNED1-202ENST00000342631 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
SNED1-202ENST00000342631 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
SNED1-202ENST00000342631 ABCC11Q96J66 1382 aa22.98■■□□□ 1.27
SNED1-202ENST00000342631 DLC1Q96QB1 1528 aa22.96■■□□□ 1.27
SNED1-202ENST00000342631 SLC24A1O60721 1099 aa22.96■■□□□ 1.27
SNED1-202ENST00000342631 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
SNED1-202ENST00000342631 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.26
SNED1-202ENST00000342631 TECPR2O15040 1411 aa22.95■■□□□ 1.26
SNED1-202ENST00000342631 STRCQ7RTU9 1775 aa22.94■■□□□ 1.26
SNED1-202ENST00000342631 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
SNED1-202ENST00000342631 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
SNED1-202ENST00000342631 TRAK1Q9UPV9 953 aa22.94■■□□□ 1.26
SNED1-202ENST00000342631 STK26Q9P289 416 aa22.91■■□□□ 1.26
SNED1-202ENST00000342631 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
SNED1-202ENST00000342631 CENPJQ9HC77 1338 aaPredicted RBP22.91■■□□□ 1.26
SNED1-202ENST00000342631 CPS1P31327 1500 aa22.9■■□□□ 1.26
SNED1-202ENST00000342631 FAM135BQ49AJ0 1406 aa22.9■■□□□ 1.26
SNED1-202ENST00000342631 CHD2O14647 1828 aaKnown RBP22.9■■□□□ 1.26
SNED1-202ENST00000342631 HIRIP3Q9BW71 556 aaPredicted RBP22.89■■□□□ 1.25
SNED1-202ENST00000342631 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
SNED1-202ENST00000342631 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
SNED1-202ENST00000342631 TESK2Q96S53 571 aa22.88■■□□□ 1.25
SNED1-202ENST00000342631 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
SNED1-202ENST00000342631 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
SNED1-202ENST00000342631 PTCH1Q13635 1447 aa22.87■■□□□ 1.25
SNED1-202ENST00000342631 QRICH2Q9H0J4 1663 aa22.86■■□□□ 1.25
SNED1-202ENST00000342631 POGKQ9P215 609 aa22.85■■□□□ 1.25
SNED1-202ENST00000342631 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
SNED1-202ENST00000342631 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
SNED1-202ENST00000342631 KCNA6P17658 529 aa22.83■■□□□ 1.25
SNED1-202ENST00000342631 TMF1P82094 1093 aa22.83■■□□□ 1.25
SNED1-202ENST00000342631 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
SNED1-202ENST00000342631 CDCA8Q53HL2 280 aa22.81■■□□□ 1.24
SNED1-202ENST00000342631 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
SNED1-202ENST00000342631 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
SNED1-202ENST00000342631 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
SNED1-202ENST00000342631 WAPLQ7Z5K2 1190 aa22.77■■□□□ 1.24
SNED1-202ENST00000342631 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
SNED1-202ENST00000342631 C11orf95C9JLR9 678 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms