RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
CAPRIN1-201ENST00000341394 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
CAPRIN1-201ENST00000341394 ABCC3O15438 1527 aa14.07□□□□□ -0.16
CAPRIN1-201ENST00000341394 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
CAPRIN1-201ENST00000341394 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
CAPRIN1-201ENST00000341394 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
CAPRIN1-201ENST00000341394 USP47Q96K76 1375 aa14.06□□□□□ -0.16
CAPRIN1-201ENST00000341394 CAMSAP1Q5T5Y3 1602 aa14.05□□□□□ -0.16
CAPRIN1-201ENST00000341394 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
CAPRIN1-201ENST00000341394 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
CAPRIN1-201ENST00000341394 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
CAPRIN1-201ENST00000341394 POLR1AO95602 1720 aaPredicted RBP14.02□□□□□ -0.17
CAPRIN1-201ENST00000341394 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.17
CAPRIN1-201ENST00000341394 DEKP35659 375 aaKnown RBP14.02□□□□□ -0.17
CAPRIN1-201ENST00000341394 MADDQ8WXG6 1647 aa14.02□□□□□ -0.17
CAPRIN1-201ENST00000341394 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
CAPRIN1-201ENST00000341394 KIF1BO60333 1816 aa14.01□□□□□ -0.17
CAPRIN1-201ENST00000341394 SYNMO15061 1565 aa14.01□□□□□ -0.17
CAPRIN1-201ENST00000341394 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
CAPRIN1-201ENST00000341394 ROCK2O75116 1388 aaKnown RBP14□□□□□ -0.17
CAPRIN1-201ENST00000341394 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
CAPRIN1-201ENST00000341394 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
CAPRIN1-201ENST00000341394 CCDC7Q96M83 1385 aa14□□□□□ -0.17
CAPRIN1-201ENST00000341394 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
CAPRIN1-201ENST00000341394 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
CAPRIN1-201ENST00000341394 FBXO31Q5XUX0 539 aaPredicted RBP13.98□□□□□ -0.17
CAPRIN1-201ENST00000341394 ADGRF5Q8IZF2 1346 aa13.97□□□□□ -0.17
CAPRIN1-201ENST00000341394 CLTCQ00610 1675 aaKnown RBP13.96□□□□□ -0.18
CAPRIN1-201ENST00000341394 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
CAPRIN1-201ENST00000341394 ADGRB3O60242 1522 aa13.95□□□□□ -0.18
CAPRIN1-201ENST00000341394 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
CAPRIN1-201ENST00000341394 PIK3C2BO00750 1634 aa13.94□□□□□ -0.18
CAPRIN1-201ENST00000341394 NOS1P29475 1434 aa13.94□□□□□ -0.18
CAPRIN1-201ENST00000341394 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
CAPRIN1-201ENST00000341394 ZC3H13Q5T200 1668 aaKnown RBP13.93□□□□□ -0.18
CAPRIN1-201ENST00000341394 PPLO60437 1756 aa13.93□□□□□ -0.18
CAPRIN1-201ENST00000341394 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
CAPRIN1-201ENST00000341394 IDI1Q13907 227 aa13.92□□□□□ -0.18
CAPRIN1-201ENST00000341394 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
CAPRIN1-201ENST00000341394 CNTLNQ9NXG0 1405 aa13.92□□□□□ -0.18
CAPRIN1-201ENST00000341394 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
CAPRIN1-201ENST00000341394 REREQ9P2R6 1566 aa13.91□□□□□ -0.18
CAPRIN1-201ENST00000341394 TESK2Q96S53 571 aa13.91□□□□□ -0.18
CAPRIN1-201ENST00000341394 DISP3Q9P2K9 1392 aa13.9□□□□□ -0.18
CAPRIN1-201ENST00000341394 NEFMP07197 916 aa13.9□□□□□ -0.18
CAPRIN1-201ENST00000341394 LAMC1P11047 1609 aa13.89□□□□□ -0.19
CAPRIN1-201ENST00000341394 AGLP35573 1532 aa13.88□□□□□ -0.19
CAPRIN1-201ENST00000341394 NOP58Q9Y2X3 529 aaKnown RBP13.88□□□□□ -0.19
CAPRIN1-201ENST00000341394 RGS3P49796 1198 aa13.88□□□□□ -0.19
CAPRIN1-201ENST00000341394 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
CAPRIN1-201ENST00000341394 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
CAPRIN1-201ENST00000341394 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
CAPRIN1-201ENST00000341394 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
CAPRIN1-201ENST00000341394 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
CAPRIN1-201ENST00000341394 MYOM2P54296 1465 aa13.86□□□□□ -0.19
CAPRIN1-201ENST00000341394 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
CAPRIN1-201ENST00000341394 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
CAPRIN1-201ENST00000341394 ERVK-7P63135 1459 aa13.85□□□□□ -0.19
CAPRIN1-201ENST00000341394 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
CAPRIN1-201ENST00000341394 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
CAPRIN1-201ENST00000341394 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
CAPRIN1-201ENST00000341394 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
CAPRIN1-201ENST00000341394 PIK3C2GO75747 1445 aa13.83□□□□□ -0.19
CAPRIN1-201ENST00000341394 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
CAPRIN1-201ENST00000341394 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
CAPRIN1-201ENST00000341394 STK26Q9P289 416 aa13.83□□□□□ -0.2
CAPRIN1-201ENST00000341394 KIAA1210Q9ULL0 1709 aa13.83□□□□□ -0.2
CAPRIN1-201ENST00000341394 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
CAPRIN1-201ENST00000341394 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
CAPRIN1-201ENST00000341394 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
CAPRIN1-201ENST00000341394 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
CAPRIN1-201ENST00000341394 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
CAPRIN1-201ENST00000341394 TMF1P82094 1093 aa13.81□□□□□ -0.2
CAPRIN1-201ENST00000341394 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
CAPRIN1-201ENST00000341394 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
CAPRIN1-201ENST00000341394 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
CAPRIN1-201ENST00000341394 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
CAPRIN1-201ENST00000341394 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
CAPRIN1-201ENST00000341394 ASXL1Q8IXJ9 1541 aa13.79□□□□□ -0.2
CAPRIN1-201ENST00000341394 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
CAPRIN1-201ENST00000341394 CC2D1BQ5T0F9 858 aaKnown RBP13.78□□□□□ -0.2
CAPRIN1-201ENST00000341394 MYOM1P52179 1685 aa13.77□□□□□ -0.2
CAPRIN1-201ENST00000341394 HDGFP51858 240 aaKnown RBP13.77□□□□□ -0.2
CAPRIN1-201ENST00000341394 RPGRIP1LQ68CZ1 1315 aa13.77□□□□□ -0.2
CAPRIN1-201ENST00000341394 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
CAPRIN1-201ENST00000341394 POGKQ9P215 609 aa13.76□□□□□ -0.21
CAPRIN1-201ENST00000341394 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
CAPRIN1-201ENST00000341394 CCER2I3L3R5 266 aa13.75□□□□□ -0.21
CAPRIN1-201ENST00000341394 TNNT2P45379 298 aaPredicted RBP13.75□□□□□ -0.21
CAPRIN1-201ENST00000341394 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
CAPRIN1-201ENST00000341394 PER1O15534 1290 aaPredicted RBP13.74□□□□□ -0.21
CAPRIN1-201ENST00000341394 ARHGEF28Q8N1W1 1705 aaKnown RBP13.74□□□□□ -0.21
CAPRIN1-201ENST00000341394 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
CAPRIN1-201ENST00000341394 HSP90AA1P07900 732 aaKnown RBP13.73□□□□□ -0.21
CAPRIN1-201ENST00000341394 QRICH2Q9H0J4 1663 aa13.73□□□□□ -0.21
CAPRIN1-201ENST00000341394 SETBP1Q9Y6X0 1596 aa13.73□□□□□ -0.21
CAPRIN1-201ENST00000341394 C3P01024 1663 aa13.73□□□□□ -0.21
CAPRIN1-201ENST00000341394 PANK3Q9H999 370 aa13.72□□□□□ -0.21
CAPRIN1-201ENST00000341394 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
CAPRIN1-201ENST00000341394 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms