RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LTKP29376 864 aa20.11■□□□□ 0.81
SIRPB3P-201ENST00000340424 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
SIRPB3P-201ENST00000340424 HDGFP51858 240 aaKnown RBP20.08■□□□□ 0.81
SIRPB3P-201ENST00000340424 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
SIRPB3P-201ENST00000340424 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
SIRPB3P-201ENST00000340424 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.8
SIRPB3P-201ENST00000340424 MYO5BQ9ULV0 1848 aa20.02■□□□□ 0.8
SIRPB3P-201ENST00000340424 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.8
SIRPB3P-201ENST00000340424 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.79
SIRPB3P-201ENST00000340424 PLEKHG1Q9ULL1 1385 aa20■□□□□ 0.79
SIRPB3P-201ENST00000340424 UBAP1LF5GYI3 381 aa20■□□□□ 0.79
SIRPB3P-201ENST00000340424 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
SIRPB3P-201ENST00000340424 TRPM2O94759 1503 aa20■□□□□ 0.79
SIRPB3P-201ENST00000340424 STRCP1A6NGW2 1772 aa20■□□□□ 0.79
SIRPB3P-201ENST00000340424 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
SIRPB3P-201ENST00000340424 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
SIRPB3P-201ENST00000340424 CHGAP10645 457 aaKnown RBP19.98■□□□□ 0.79
SIRPB3P-201ENST00000340424 TRIM52Q96A61 297 aa19.98■□□□□ 0.79
SIRPB3P-201ENST00000340424 TOM1O60784 492 aa19.97■□□□□ 0.79
SIRPB3P-201ENST00000340424 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
SIRPB3P-201ENST00000340424 KCNA6P17658 529 aa19.94■□□□□ 0.78
SIRPB3P-201ENST00000340424 BCANQ96GW7 911 aa19.94■□□□□ 0.78
SIRPB3P-201ENST00000340424 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SIRPB3P-201ENST00000340424 NKTRP30414 1462 aaKnown RBP19.93■□□□□ 0.78
SIRPB3P-201ENST00000340424 NWD1Q149M9 1564 aa19.93■□□□□ 0.78
SIRPB3P-201ENST00000340424 SLC26A8Q96RN1 970 aa19.93■□□□□ 0.78
SIRPB3P-201ENST00000340424 CLTCL1P53675 1640 aa19.92■□□□□ 0.78
SIRPB3P-201ENST00000340424 TBX22Q9Y458 520 aa19.91■□□□□ 0.78
SIRPB3P-201ENST00000340424 KIF1BO60333 1816 aa19.9■□□□□ 0.78
SIRPB3P-201ENST00000340424 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
SIRPB3P-201ENST00000340424 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
SIRPB3P-201ENST00000340424 ZNF326Q5BKZ1 582 aaKnown RBP19.87■□□□□ 0.77
SIRPB3P-201ENST00000340424 CHD2O14647 1828 aaKnown RBP19.87■□□□□ 0.77
SIRPB3P-201ENST00000340424 ADAMTS13Q76LX8 1427 aa19.86■□□□□ 0.77
SIRPB3P-201ENST00000340424 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
SIRPB3P-201ENST00000340424 XIRP1Q702N8 1843 aaKnown RBP19.86■□□□□ 0.77
SIRPB3P-201ENST00000340424 ALKQ9UM73 1620 aa19.85■□□□□ 0.77
SIRPB3P-201ENST00000340424 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
SIRPB3P-201ENST00000340424 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
SIRPB3P-201ENST00000340424 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
SIRPB3P-201ENST00000340424 PROSER2Q86WR7 435 aaPredicted RBP19.83■□□□□ 0.77
SIRPB3P-201ENST00000340424 RPGRIP1LQ68CZ1 1315 aa19.82■□□□□ 0.76
SIRPB3P-201ENST00000340424 PIP4K2BP78356 416 aa19.82■□□□□ 0.76
SIRPB3P-201ENST00000340424 NUTM2DQ5VT03 806 aaPredicted RBP19.82■□□□□ 0.76
SIRPB3P-201ENST00000340424 NCOA3Q9Y6Q9 1424 aa19.82■□□□□ 0.76
SIRPB3P-201ENST00000340424 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
SIRPB3P-201ENST00000340424 NRXN3Q9Y4C0 1643 aa19.8■□□□□ 0.76
SIRPB3P-201ENST00000340424 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
SIRPB3P-201ENST00000340424 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
SIRPB3P-201ENST00000340424 MSH6P52701 1360 aa19.78■□□□□ 0.76
SIRPB3P-201ENST00000340424 RNF216Q9NWF9 866 aaPredicted RBP19.77■□□□□ 0.76
SIRPB3P-201ENST00000340424 HRCP23327 699 aa19.76■□□□□ 0.75
SIRPB3P-201ENST00000340424 HSPA1LP34931 641 aa19.75■□□□□ 0.75
SIRPB3P-201ENST00000340424 PPLO60437 1756 aa19.74■□□□□ 0.75
SIRPB3P-201ENST00000340424 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
SIRPB3P-201ENST00000340424 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
SIRPB3P-201ENST00000340424 AMOTL2Q9Y2J4 779 aa19.73■□□□□ 0.75
SIRPB3P-201ENST00000340424 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
SIRPB3P-201ENST00000340424 PTPRUQ92729 1446 aa19.71■□□□□ 0.75
SIRPB3P-201ENST00000340424 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
SIRPB3P-201ENST00000340424 METP08581 1390 aa19.7■□□□□ 0.74
SIRPB3P-201ENST00000340424 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
SIRPB3P-201ENST00000340424 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
SIRPB3P-201ENST00000340424 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
SIRPB3P-201ENST00000340424 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
SIRPB3P-201ENST00000340424 DCCP43146 1447 aa19.68■□□□□ 0.74
SIRPB3P-201ENST00000340424 CADPS2Q86UW7 1296 aa19.67■□□□□ 0.74
SIRPB3P-201ENST00000340424 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
SIRPB3P-201ENST00000340424 PRAG1Q86YV5 1406 aa19.67■□□□□ 0.74
SIRPB3P-201ENST00000340424 ROBO1Q9Y6N7 1651 aa19.66■□□□□ 0.74
SIRPB3P-201ENST00000340424 SLAIN2Q9P270 581 aa19.66■□□□□ 0.74
SIRPB3P-201ENST00000340424 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
SIRPB3P-201ENST00000340424 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
SIRPB3P-201ENST00000340424 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
SIRPB3P-201ENST00000340424 ATF3P18847 181 aa19.64■□□□□ 0.73
SIRPB3P-201ENST00000340424 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
SIRPB3P-201ENST00000340424 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
SIRPB3P-201ENST00000340424 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
SIRPB3P-201ENST00000340424 MYOM2P54296 1465 aa19.6■□□□□ 0.73
SIRPB3P-201ENST00000340424 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
SIRPB3P-201ENST00000340424 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
SIRPB3P-201ENST00000340424 MED1Q15648 1581 aaPredicted RBP19.59■□□□□ 0.73
SIRPB3P-201ENST00000340424 NRXN1Q9ULB1 1477 aa19.57■□□□□ 0.72
SIRPB3P-201ENST00000340424 LAMC1P11047 1609 aa19.56■□□□□ 0.72
SIRPB3P-201ENST00000340424 NALCNQ8IZF0 1738 aa19.55■□□□□ 0.72
SIRPB3P-201ENST00000340424 ROBO2Q9HCK4 1378 aa19.55■□□□□ 0.72
SIRPB3P-201ENST00000340424 TECPR2O15040 1411 aa19.54■□□□□ 0.72
SIRPB3P-201ENST00000340424 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
SIRPB3P-201ENST00000340424 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
SIRPB3P-201ENST00000340424 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
SIRPB3P-201ENST00000340424 MST1RQ04912 1400 aa19.52■□□□□ 0.72
SIRPB3P-201ENST00000340424 KNDC1Q76NI1 1749 aa19.52■□□□□ 0.72
SIRPB3P-201ENST00000340424 LRPPRCP42704 1394 aaKnown RBP19.52■□□□□ 0.72
SIRPB3P-201ENST00000340424 ABCC11Q96J66 1382 aa19.51■□□□□ 0.71
SIRPB3P-201ENST00000340424 C14orf93Q9H972 538 aaKnown RBP19.5■□□□□ 0.71
SIRPB3P-201ENST00000340424 COL16A1Q07092 1604 aaPredicted RBP19.5■□□□□ 0.71
SIRPB3P-201ENST00000340424 ASXL1Q8IXJ9 1541 aa19.49■□□□□ 0.71
SIRPB3P-201ENST00000340424 JCADQ9P266 1359 aa19.48■□□□□ 0.71
SIRPB3P-201ENST00000340424 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
SIRPB3P-201ENST00000340424 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms