RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
ERCC1-203ENST00000340192 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
ERCC1-203ENST00000340192 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
ERCC1-203ENST00000340192 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
ERCC1-203ENST00000340192 LRRC7Q96NW7 1537 aa21.85■■□□□ 1.09
ERCC1-203ENST00000340192 KIF1BO60333 1816 aa21.85■■□□□ 1.09
ERCC1-203ENST00000340192 UBAP1LF5GYI3 381 aa21.85■■□□□ 1.09
ERCC1-203ENST00000340192 BCANQ96GW7 911 aa21.85■■□□□ 1.09
ERCC1-203ENST00000340192 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
ERCC1-203ENST00000340192 SETD5Q9C0A6 1442 aa21.84■■□□□ 1.09
ERCC1-203ENST00000340192 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.84■■□□□ 1.09
ERCC1-203ENST00000340192 NUTM2DQ5VT03 806 aaPredicted RBP21.83■■□□□ 1.09
ERCC1-203ENST00000340192 XIRP1Q702N8 1843 aaKnown RBP21.82■■□□□ 1.08
ERCC1-203ENST00000340192 FOXD1Q16676 465 aa21.79■■□□□ 1.08
ERCC1-203ENST00000340192 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
ERCC1-203ENST00000340192 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
ERCC1-203ENST00000340192 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
ERCC1-203ENST00000340192 KCNA6P17658 529 aa21.77■■□□□ 1.08
ERCC1-203ENST00000340192 MPHOSPH9Q99550 1183 aa21.77■■□□□ 1.08
ERCC1-203ENST00000340192 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
ERCC1-203ENST00000340192 RAB3GAP2Q9H2M9 1393 aa21.76■■□□□ 1.07
ERCC1-203ENST00000340192 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
ERCC1-203ENST00000340192 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
ERCC1-203ENST00000340192 ACIN1Q9UKV3 1341 aaKnown RBP21.76■■□□□ 1.07
ERCC1-203ENST00000340192 TOM1O60784 492 aa21.75■■□□□ 1.07
ERCC1-203ENST00000340192 TBX22Q9Y458 520 aa21.75■■□□□ 1.07
ERCC1-203ENST00000340192 ALKQ9UM73 1620 aa21.75■■□□□ 1.07
ERCC1-203ENST00000340192 NRXN3Q9Y4C0 1643 aa21.74■■□□□ 1.07
ERCC1-203ENST00000340192 NKTRP30414 1462 aaKnown RBP21.74■■□□□ 1.07
ERCC1-203ENST00000340192 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
ERCC1-203ENST00000340192 SETBP1Q9Y6X0 1596 aa21.72■■□□□ 1.07
ERCC1-203ENST00000340192 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
ERCC1-203ENST00000340192 TMEM94Q12767 1356 aa21.71■■□□□ 1.07
ERCC1-203ENST00000340192 PROSER2Q86WR7 435 aaPredicted RBP21.7■■□□□ 1.06
ERCC1-203ENST00000340192 CCDC144AA2RUR9 1427 aa21.69■■□□□ 1.06
ERCC1-203ENST00000340192 PPLO60437 1756 aa21.69■■□□□ 1.06
ERCC1-203ENST00000340192 RBM33Q96EV2 1170 aaKnown RBP21.68■■□□□ 1.06
ERCC1-203ENST00000340192 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
ERCC1-203ENST00000340192 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
ERCC1-203ENST00000340192 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
ERCC1-203ENST00000340192 VGFO15240 615 aaPredicted RBP21.62■■□□□ 1.05
ERCC1-203ENST00000340192 XRN1Q8IZH2 1706 aaKnown RBP21.62■■□□□ 1.05
ERCC1-203ENST00000340192 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
ERCC1-203ENST00000340192 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
ERCC1-203ENST00000340192 METP08581 1390 aa21.61■■□□□ 1.05
ERCC1-203ENST00000340192 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
ERCC1-203ENST00000340192 HRCP23327 699 aa21.6■■□□□ 1.05
ERCC1-203ENST00000340192 HSPA1LP34931 641 aa21.6■■□□□ 1.05
ERCC1-203ENST00000340192 AMOTL2Q9Y2J4 779 aa21.6■■□□□ 1.05
ERCC1-203ENST00000340192 MSH6P52701 1360 aa21.59■■□□□ 1.05
ERCC1-203ENST00000340192 RGL3Q3MIN7 710 aa21.58■■□□□ 1.05
ERCC1-203ENST00000340192 NCOA3Q9Y6Q9 1424 aa21.57■■□□□ 1.04
ERCC1-203ENST00000340192 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
ERCC1-203ENST00000340192 C14orf37Q86TY3 774 aa21.54■■□□□ 1.04
ERCC1-203ENST00000340192 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
ERCC1-203ENST00000340192 ANKRD30BQ9BXX2 1392 aa21.52■■□□□ 1.04
ERCC1-203ENST00000340192 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.03
ERCC1-203ENST00000340192 FAM135BQ49AJ0 1406 aa21.51■■□□□ 1.03
ERCC1-203ENST00000340192 C19orf44Q9H6X5 657 aa21.49■■□□□ 1.03
ERCC1-203ENST00000340192 SLAIN2Q9P270 581 aa21.49■■□□□ 1.03
ERCC1-203ENST00000340192 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
ERCC1-203ENST00000340192 NALCNQ8IZF0 1738 aa21.46■■□□□ 1.03
ERCC1-203ENST00000340192 ATF3P18847 181 aa21.45■■□□□ 1.02
ERCC1-203ENST00000340192 CADPS2Q86UW7 1296 aa21.45■■□□□ 1.02
ERCC1-203ENST00000340192 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
ERCC1-203ENST00000340192 DISP3Q9P2K9 1392 aa21.44■■□□□ 1.02
ERCC1-203ENST00000340192 DCCP43146 1447 aa21.44■■□□□ 1.02
ERCC1-203ENST00000340192 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
ERCC1-203ENST00000340192 MYOM2P54296 1465 aa21.44■■□□□ 1.02
ERCC1-203ENST00000340192 ROBO2Q9HCK4 1378 aa21.43■■□□□ 1.02
ERCC1-203ENST00000340192 NRXN1Q9ULB1 1477 aa21.43■■□□□ 1.02
ERCC1-203ENST00000340192 ADGRL3Q9HAR2 1447 aa21.42■■□□□ 1.02
ERCC1-203ENST00000340192 ASXL1Q8IXJ9 1541 aa21.41■■□□□ 1.02
ERCC1-203ENST00000340192 PHLPP1O60346 1717 aa21.41■■□□□ 1.02
ERCC1-203ENST00000340192 LAMC1P11047 1609 aa21.4■■□□□ 1.02
ERCC1-203ENST00000340192 MED1Q15648 1581 aaPredicted RBP21.4■■□□□ 1.02
ERCC1-203ENST00000340192 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
ERCC1-203ENST00000340192 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
ERCC1-203ENST00000340192 STK26Q9P289 416 aa21.36■■□□□ 1.01
ERCC1-203ENST00000340192 TECPR2O15040 1411 aa21.36■■□□□ 1.01
ERCC1-203ENST00000340192 MST1RQ04912 1400 aa21.36■■□□□ 1.01
ERCC1-203ENST00000340192 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
ERCC1-203ENST00000340192 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
ERCC1-203ENST00000340192 CFAP70Q5T0N1 1121 aa21.34■■□□□ 1.01
ERCC1-203ENST00000340192 DCAF11Q8TEB1 546 aa21.34■■□□□ 1.01
ERCC1-203ENST00000340192 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1.01
ERCC1-203ENST00000340192 YTHDC2Q9H6S0 1430 aaKnown RBP21.33■■□□□ 1.01
ERCC1-203ENST00000340192 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
ERCC1-203ENST00000340192 ABCC11Q96J66 1382 aa21.33■■□□□ 1
ERCC1-203ENST00000340192 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1
ERCC1-203ENST00000340192 BRINP3Q76B58 766 aa21.32■■□□□ 1
ERCC1-203ENST00000340192 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
ERCC1-203ENST00000340192 WAPLQ7Z5K2 1190 aa21.3■■□□□ 1
ERCC1-203ENST00000340192 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
ERCC1-203ENST00000340192 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
ERCC1-203ENST00000340192 STAC3Q96MF2 364 aa21.28■■□□□ 1
ERCC1-203ENST00000340192 C1orf167Q5SNV9 1468 aa21.27■■□□□ 1
ERCC1-203ENST00000340192 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
ERCC1-203ENST00000340192 ADGRB1O14514 1584 aa21.27■□□□□ 0.99
ERCC1-203ENST00000340192 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms