RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 LNPKQ9C0E8 428 aa15.59■□□□□ 0.09
RIOK3-201ENST00000339486 LRPPRCP42704 1394 aaKnown RBP15.59■□□□□ 0.09
RIOK3-201ENST00000339486 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
RIOK3-201ENST00000339486 MCM4P33991 863 aa15.59■□□□□ 0.09
RIOK3-201ENST00000339486 GGT6Q6P531 493 aa15.58■□□□□ 0.08
RIOK3-201ENST00000339486 IGHDP01880 384 aa15.58■□□□□ 0.08
RIOK3-201ENST00000339486 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
RIOK3-201ENST00000339486 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
RIOK3-201ENST00000339486 SPATA31E1Q6ZUB1 1445 aa15.57■□□□□ 0.08
RIOK3-201ENST00000339486 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
RIOK3-201ENST00000339486 CAMSAP2Q08AD1 1489 aa15.57■□□□□ 0.08
RIOK3-201ENST00000339486 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
RIOK3-201ENST00000339486 ELL2O00472 640 aaPredicted RBP15.57■□□□□ 0.08
RIOK3-201ENST00000339486 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
RIOK3-201ENST00000339486 SKOR2Q2VWA4 1001 aaPredicted RBP15.56■□□□□ 0.08
RIOK3-201ENST00000339486 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
RIOK3-201ENST00000339486 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
RIOK3-201ENST00000339486 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
RIOK3-201ENST00000339486 DISP3Q9P2K9 1392 aa15.55■□□□□ 0.08
RIOK3-201ENST00000339486 PTPRGP23470 1445 aa15.55■□□□□ 0.08
RIOK3-201ENST00000339486 MTHFSP49914 203 aa15.55■□□□□ 0.08
RIOK3-201ENST00000339486 AAMPQ13685 434 aa15.55■□□□□ 0.08
RIOK3-201ENST00000339486 FOXD4L5Q5VV16 416 aaPredicted RBP15.54■□□□□ 0.08
RIOK3-201ENST00000339486 FOXD4L4Q8WXT5 416 aaPredicted RBP15.54■□□□□ 0.08
RIOK3-201ENST00000339486 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
RIOK3-201ENST00000339486 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
RIOK3-201ENST00000339486 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
RIOK3-201ENST00000339486 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
RIOK3-201ENST00000339486 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
RIOK3-201ENST00000339486 PLEKHH2Q8IVE3 1493 aa15.51■□□□□ 0.07
RIOK3-201ENST00000339486 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
RIOK3-201ENST00000339486 GRPEL1Q9HAV7 217 aa15.51■□□□□ 0.07
RIOK3-201ENST00000339486 SEC24BO95487 1268 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
RIOK3-201ENST00000339486 PLEKHH1Q9ULM0 1364 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 SLC12A5Q9H2X9 1139 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 NKTRP30414 1462 aaKnown RBP15.49■□□□□ 0.07
RIOK3-201ENST00000339486 ESPNB1AK53 854 aa15.49■□□□□ 0.07
RIOK3-201ENST00000339486 RIPK4P57078 832 aa15.48■□□□□ 0.07
RIOK3-201ENST00000339486 NOL8Q76FK4 1167 aaKnown RBP15.48■□□□□ 0.07
RIOK3-201ENST00000339486 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
RIOK3-201ENST00000339486 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
RIOK3-201ENST00000339486 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
RIOK3-201ENST00000339486 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
RIOK3-201ENST00000339486 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
RIOK3-201ENST00000339486 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
RIOK3-201ENST00000339486 NASPP49321 788 aaPredicted RBP15.47■□□□□ 0.07
RIOK3-201ENST00000339486 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
RIOK3-201ENST00000339486 PZPP20742 1482 aa15.47■□□□□ 0.07
RIOK3-201ENST00000339486 TESK2Q96S53 571 aa15.47■□□□□ 0.07
RIOK3-201ENST00000339486 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
RIOK3-201ENST00000339486 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
RIOK3-201ENST00000339486 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.06
RIOK3-201ENST00000339486 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 ST18O60284 1047 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 PANK2Q9BZ23 570 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 FOXD4L6Q3SYB3 417 aaPredicted RBP15.45■□□□□ 0.06
RIOK3-201ENST00000339486 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 FOXD4L3Q6VB84 417 aaPredicted RBP15.45■□□□□ 0.06
RIOK3-201ENST00000339486 PKNOX2Q96KN3 472 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 TBC1D32Q96NH3 1257 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 TERF2IPQ9NYB0 399 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 KDM6BO15054 1643 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 XRCC6P12956 609 aaKnown RBP eCLIP15.45■□□□□ 0.06
RIOK3-201ENST00000339486 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
RIOK3-201ENST00000339486 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
RIOK3-201ENST00000339486 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
RIOK3-201ENST00000339486 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
RIOK3-201ENST00000339486 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 MCCP23508 829 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 KIAA2012Q0VF49 1180 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 WDR63Q8IWG1 891 aa15.44■□□□□ 0.06
RIOK3-201ENST00000339486 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
RIOK3-201ENST00000339486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
RIOK3-201ENST00000339486 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
RIOK3-201ENST00000339486 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
RIOK3-201ENST00000339486 SOX12O15370 315 aa15.43■□□□□ 0.06
RIOK3-201ENST00000339486 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
RIOK3-201ENST00000339486 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
RIOK3-201ENST00000339486 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
RIOK3-201ENST00000339486 R3HCC1Q9Y3T6 440 aaKnown RBP15.41■□□□□ 0.06
RIOK3-201ENST00000339486 C1orf115Q9H7X2 142 aa15.41■□□□□ 0.06
RIOK3-201ENST00000339486 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
RIOK3-201ENST00000339486 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
RIOK3-201ENST00000339486 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
RIOK3-201ENST00000339486 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.4■□□□□ 0.06
RIOK3-201ENST00000339486 SYAP1Q96A49 352 aaPredicted RBP15.4■□□□□ 0.06
RIOK3-201ENST00000339486 RRAGDQ9NQL2 400 aaPredicted RBP15.4■□□□□ 0.06
RIOK3-201ENST00000339486 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
RIOK3-201ENST00000339486 PRAG1Q86YV5 1406 aa15.4■□□□□ 0.06
RIOK3-201ENST00000339486 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
RIOK3-201ENST00000339486 SLC4A10Q6U841 1118 aa15.39■□□□□ 0.05
RIOK3-201ENST00000339486 ARHGAP5Q13017 1502 aa15.39■□□□□ 0.05
RIOK3-201ENST00000339486 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
RIOK3-201ENST00000339486 NUCB2P80303 420 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms