RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 KIF1BO60333 1816 aa36.55■■■■□ 3.44
FAM78B-201ENST00000338353 ZNF335Q9H4Z2 1342 aaPredicted RBP36.53■■■■□ 3.44
FAM78B-201ENST00000338353 ZNF326Q5BKZ1 582 aaKnown RBP36.51■■■■□ 3.44
FAM78B-201ENST00000338353 PPP1R15AO75807 674 aaPredicted RBP36.5■■■■□ 3.43
FAM78B-201ENST00000338353 HDGFP51858 240 aaKnown RBP36.5■■■■□ 3.43
FAM78B-201ENST00000338353 NUTM2DQ5VT03 806 aaPredicted RBP36.5■■■■□ 3.43
FAM78B-201ENST00000338353 SENP3Q9H4L4 574 aaPredicted RBP36.49■■■■□ 3.43
FAM78B-201ENST00000338353 CCDC144AA2RUR9 1427 aa36.48■■■■□ 3.43
FAM78B-201ENST00000338353 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.47■■■■□ 3.43
FAM78B-201ENST00000338353 LTBP4Q8N2S1 1624 aa36.45■■■■□ 3.42
FAM78B-201ENST00000338353 BCANQ96GW7 911 aa36.44■■■■□ 3.42
FAM78B-201ENST00000338353 CERKQ8TCT0 537 aa36.4■■■■□ 3.42
FAM78B-201ENST00000338353 PLEKHG1Q9ULL1 1385 aa36.4■■■■□ 3.42
FAM78B-201ENST00000338353 SLC26A8Q96RN1 970 aa36.39■■■■□ 3.42
FAM78B-201ENST00000338353 NEXMIFQ5QGS0 1516 aa36.36■■■■□ 3.41
FAM78B-201ENST00000338353 ANKRD30BQ9BXX2 1392 aa36.35■■■■□ 3.41
FAM78B-201ENST00000338353 RGL3Q3MIN7 710 aa36.32■■■■□ 3.4
FAM78B-201ENST00000338353 SPATA31E1Q6ZUB1 1445 aa36.3■■■■□ 3.4
FAM78B-201ENST00000338353 STRCP1A6NGW2 1772 aa36.29■■■■□ 3.4
FAM78B-201ENST00000338353 RPGRIP1LQ68CZ1 1315 aa36.28■■■■□ 3.4
FAM78B-201ENST00000338353 CPS1P31327 1500 aa36.26■■■■□ 3.4
FAM78B-201ENST00000338353 PPLO60437 1756 aa36.25■■■■□ 3.39
FAM78B-201ENST00000338353 ADAMTS13Q76LX8 1427 aa36.24■■■■□ 3.39
FAM78B-201ENST00000338353 VGFO15240 615 aaPredicted RBP36.22■■■■□ 3.39
FAM78B-201ENST00000338353 TBX22Q9Y458 520 aa36.22■■■■□ 3.39
FAM78B-201ENST00000338353 NRXN3Q9Y4C0 1643 aa36.2■■■■□ 3.39
FAM78B-201ENST00000338353 SETBP1Q9Y6X0 1596 aa36.2■■■■□ 3.39
FAM78B-201ENST00000338353 DIP2AQ14689 1571 aa36.19■■■■□ 3.38
FAM78B-201ENST00000338353 KCNA6P17658 529 aa36.17■■■■□ 3.38
FAM78B-201ENST00000338353 IFT172Q9UG01 1749 aa36.15■■■■□ 3.38
FAM78B-201ENST00000338353 IQSEC2Q5JU85 1478 aa36.15■■■■□ 3.38
FAM78B-201ENST00000338353 LRRC7Q96NW7 1537 aa36.13■■■■□ 3.37
FAM78B-201ENST00000338353 CHD2O14647 1828 aaKnown RBP36.13■■■■□ 3.37
FAM78B-201ENST00000338353 FBXO41Q8TF61 875 aa36.12■■■■□ 3.37
FAM78B-201ENST00000338353 NWD1Q149M9 1564 aa36.11■■■■□ 3.37
FAM78B-201ENST00000338353 ADGRF5Q8IZF2 1346 aa36.11■■■■□ 3.37
FAM78B-201ENST00000338353 DHX57Q6P158 1386 aaKnown RBP36.09■■■■□ 3.37
FAM78B-201ENST00000338353 ILDR1Q86SU0 546 aaPredicted RBP36.07■■■■□ 3.37
FAM78B-201ENST00000338353 PIK3R4Q99570 1358 aa36.07■■■■□ 3.36
FAM78B-201ENST00000338353 METP08581 1390 aa36.05■■■■□ 3.36
FAM78B-201ENST00000338353 NKTRP30414 1462 aaKnown RBP36.04■■■■□ 3.36
FAM78B-201ENST00000338353 PROSER2Q86WR7 435 aaPredicted RBP36.04■■■■□ 3.36
FAM78B-201ENST00000338353 ALKQ9UM73 1620 aa36.03■■■■□ 3.36
FAM78B-201ENST00000338353 PTPRUQ92729 1446 aa36.03■■■■□ 3.36
FAM78B-201ENST00000338353 RBM33Q96EV2 1170 aaKnown RBP36.02■■■■□ 3.36
FAM78B-201ENST00000338353 XIRP1Q702N8 1843 aaKnown RBP36.01■■■■□ 3.36
FAM78B-201ENST00000338353 AMOTL2Q9Y2J4 779 aa36.01■■■■□ 3.35
FAM78B-201ENST00000338353 SETD1AO15047 1707 aaKnown RBP36■■■■□ 3.35
FAM78B-201ENST00000338353 TMEM94Q12767 1356 aa35.99■■■■□ 3.35
FAM78B-201ENST00000338353 MYOM2P54296 1465 aa35.98■■■■□ 3.35
FAM78B-201ENST00000338353 UBAP1LF5GYI3 381 aa35.98■■■■□ 3.35
FAM78B-201ENST00000338353 PIK3C2GO75747 1445 aa35.97■■■■□ 3.35
FAM78B-201ENST00000338353 DCAF11Q8TEB1 546 aa35.97■■■■□ 3.35
FAM78B-201ENST00000338353 KDM2AQ9Y2K7 1162 aa35.96■■■■□ 3.35
FAM78B-201ENST00000338353 SIN3AQ96ST3 1273 aa35.95■■■■□ 3.35
FAM78B-201ENST00000338353 XRN1Q8IZH2 1706 aaKnown RBP35.94■■■■□ 3.34
FAM78B-201ENST00000338353 NRXN1Q9ULB1 1477 aa35.93■■■■□ 3.34
FAM78B-201ENST00000338353 NEUROD1Q13562 356 aa35.89■■■■□ 3.34
FAM78B-201ENST00000338353 TOM1O60784 492 aa35.88■■■■□ 3.33
FAM78B-201ENST00000338353 CFAP70Q5T0N1 1121 aa35.85■■■■□ 3.33
FAM78B-201ENST00000338353 CCER1Q8TC90 406 aaPredicted RBP35.85■■■■□ 3.33
FAM78B-201ENST00000338353 TMEM132EQ6IEE7 984 aa35.84■■■■□ 3.33
FAM78B-201ENST00000338353 C14orf93Q9H972 538 aaKnown RBP35.84■■■■□ 3.33
FAM78B-201ENST00000338353 C14orf37Q86TY3 774 aa35.83■■■■□ 3.33
FAM78B-201ENST00000338353 STAC3Q96MF2 364 aa35.83■■■■□ 3.33
FAM78B-201ENST00000338353 ASXL1Q8IXJ9 1541 aa35.82■■■■□ 3.32
FAM78B-201ENST00000338353 PIP4K2BP78356 416 aa35.81■■■■□ 3.32
FAM78B-201ENST00000338353 SCAF1Q9H7N4 1312 aaKnown RBP35.81■■■■□ 3.32
FAM78B-201ENST00000338353 LAMC1P11047 1609 aa35.8■■■■□ 3.32
FAM78B-201ENST00000338353 MSH6P52701 1360 aa35.8■■■■□ 3.32
FAM78B-201ENST00000338353 NCOA3Q9Y6Q9 1424 aa35.79■■■■□ 3.32
FAM78B-201ENST00000338353 STK26Q9P289 416 aa35.78■■■■□ 3.32
FAM78B-201ENST00000338353 ROBO2Q9HCK4 1378 aa35.76■■■■□ 3.32
FAM78B-201ENST00000338353 PTCH1Q13635 1447 aa35.76■■■■□ 3.32
FAM78B-201ENST00000338353 L3MBTL2Q969R5 705 aa35.76■■■■□ 3.31
FAM78B-201ENST00000338353 LRPPRCP42704 1394 aaKnown RBP35.74■■■■□ 3.31
FAM78B-201ENST00000338353 PRAG1Q86YV5 1406 aa35.73■■■■□ 3.31
FAM78B-201ENST00000338353 YTHDC2Q9H6S0 1430 aaKnown RBP35.72■■■■□ 3.31
FAM78B-201ENST00000338353 C19orf44Q9H6X5 657 aa35.71■■■■□ 3.31
FAM78B-201ENST00000338353 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.7■■■■□ 3.31
FAM78B-201ENST00000338353 CLSPNQ9HAW4 1339 aa35.7■■■■□ 3.31
FAM78B-201ENST00000338353 ABCC11Q96J66 1382 aa35.69■■■■□ 3.3
FAM78B-201ENST00000338353 TECPR2O15040 1411 aa35.67■■■■□ 3.3
FAM78B-201ENST00000338353 KNDC1Q76NI1 1749 aa35.67■■■■□ 3.3
FAM78B-201ENST00000338353 ADGRB1O14514 1584 aa35.66■■■■□ 3.3
FAM78B-201ENST00000338353 NALCNQ8IZF0 1738 aa35.65■■■■□ 3.3
FAM78B-201ENST00000338353 ATF3P18847 181 aa35.64■■■■□ 3.3
FAM78B-201ENST00000338353 ADGRL3Q9HAR2 1447 aa35.64■■■■□ 3.3
FAM78B-201ENST00000338353 WAPLQ7Z5K2 1190 aa35.63■■■■□ 3.29
FAM78B-201ENST00000338353 CADPS2Q86UW7 1296 aa35.62■■■■□ 3.29
FAM78B-201ENST00000338353 TONSLQ96HA7 1378 aa35.6■■■■□ 3.29
FAM78B-201ENST00000338353 SLAIN2Q9P270 581 aa35.6■■■■□ 3.29
FAM78B-201ENST00000338353 PLEKHH1Q9ULM0 1364 aa35.59■■■■□ 3.29
FAM78B-201ENST00000338353 DCCP43146 1447 aa35.59■■■■□ 3.29
FAM78B-201ENST00000338353 KIAA1210Q9ULL0 1709 aa35.58■■■■□ 3.29
FAM78B-201ENST00000338353 TRAK1Q9UPV9 953 aa35.56■■■■□ 3.28
FAM78B-201ENST00000338353 FAM135BQ49AJ0 1406 aa35.55■■■■□ 3.28
FAM78B-201ENST00000338353 ROBO1Q9Y6N7 1651 aa35.53■■■■□ 3.28
FAM78B-201ENST00000338353 NBPF1Q3BBV0 1214 aa35.53■■■■□ 3.28
FAM78B-201ENST00000338353 SIRT1Q96EB6 747 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms