RNA–Protein interactions for RNA: ENST00000335674.1

LCE3A-201, Transcript of late cornified envelope 3A, humanhuman

APPRIS P1 BASIC

Gene LCE3A, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3A-201ENST00000335674 HSPA1LP34931 641 aa23.73■■□□□ 1.39
LCE3A-201ENST00000335674 HDGFP51858 240 aaKnown RBP23.73■■□□□ 1.39
LCE3A-201ENST00000335674 PLEKHG1Q9ULL1 1385 aa23.72■■□□□ 1.39
LCE3A-201ENST00000335674 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
LCE3A-201ENST00000335674 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
LCE3A-201ENST00000335674 KCNA6P17658 529 aa23.71■■□□□ 1.39
LCE3A-201ENST00000335674 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
LCE3A-201ENST00000335674 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
LCE3A-201ENST00000335674 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
LCE3A-201ENST00000335674 CHD2O14647 1828 aaKnown RBP23.67■■□□□ 1.38
LCE3A-201ENST00000335674 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
LCE3A-201ENST00000335674 ILDR2Q71H61 639 aa23.65■■□□□ 1.38
LCE3A-201ENST00000335674 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
LCE3A-201ENST00000335674 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
LCE3A-201ENST00000335674 NAIPQ13075 1403 aa23.64■■□□□ 1.37
LCE3A-201ENST00000335674 MED1Q15648 1581 aaPredicted RBP23.62■■□□□ 1.37
LCE3A-201ENST00000335674 BCANQ96GW7 911 aa23.61■■□□□ 1.37
LCE3A-201ENST00000335674 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
LCE3A-201ENST00000335674 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
LCE3A-201ENST00000335674 PROSER2Q86WR7 435 aaPredicted RBP23.6■■□□□ 1.37
LCE3A-201ENST00000335674 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
LCE3A-201ENST00000335674 FAM135BQ49AJ0 1406 aa23.59■■□□□ 1.37
LCE3A-201ENST00000335674 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
LCE3A-201ENST00000335674 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
LCE3A-201ENST00000335674 TRPM2O94759 1503 aa23.56■■□□□ 1.36
LCE3A-201ENST00000335674 NCOA3Q9Y6Q9 1424 aa23.56■■□□□ 1.36
LCE3A-201ENST00000335674 SOCS7O14512 581 aa23.54■■□□□ 1.36
LCE3A-201ENST00000335674 MSH6P52701 1360 aa23.53■■□□□ 1.36
LCE3A-201ENST00000335674 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
LCE3A-201ENST00000335674 CLTCL1P53675 1640 aa23.52■■□□□ 1.36
LCE3A-201ENST00000335674 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
LCE3A-201ENST00000335674 KIF1BO60333 1816 aa23.5■■□□□ 1.35
LCE3A-201ENST00000335674 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
LCE3A-201ENST00000335674 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
LCE3A-201ENST00000335674 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
LCE3A-201ENST00000335674 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
LCE3A-201ENST00000335674 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
LCE3A-201ENST00000335674 XRN1Q8IZH2 1706 aaKnown RBP23.45■■□□□ 1.34
LCE3A-201ENST00000335674 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
LCE3A-201ENST00000335674 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
LCE3A-201ENST00000335674 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
LCE3A-201ENST00000335674 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.42■■□□□ 1.34
LCE3A-201ENST00000335674 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
LCE3A-201ENST00000335674 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
LCE3A-201ENST00000335674 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
LCE3A-201ENST00000335674 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
LCE3A-201ENST00000335674 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
LCE3A-201ENST00000335674 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
LCE3A-201ENST00000335674 DCCP43146 1447 aa23.38■■□□□ 1.33
LCE3A-201ENST00000335674 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
LCE3A-201ENST00000335674 C14orf37Q86TY3 774 aa23.36■■□□□ 1.33
LCE3A-201ENST00000335674 METP08581 1390 aa23.35■■□□□ 1.33
LCE3A-201ENST00000335674 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
LCE3A-201ENST00000335674 PPLO60437 1756 aa23.33■■□□□ 1.33
LCE3A-201ENST00000335674 ATF3P18847 181 aa23.33■■□□□ 1.33
LCE3A-201ENST00000335674 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.32
LCE3A-201ENST00000335674 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.32
LCE3A-201ENST00000335674 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.32
LCE3A-201ENST00000335674 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
LCE3A-201ENST00000335674 AHDC1Q5TGY3 1603 aaPredicted RBP23.32■■□□□ 1.32
LCE3A-201ENST00000335674 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
LCE3A-201ENST00000335674 JCADQ9P266 1359 aa23.28■■□□□ 1.32
LCE3A-201ENST00000335674 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
LCE3A-201ENST00000335674 ADGRL3Q9HAR2 1447 aa23.26■■□□□ 1.31
LCE3A-201ENST00000335674 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
LCE3A-201ENST00000335674 NALCNQ8IZF0 1738 aa23.25■■□□□ 1.31
LCE3A-201ENST00000335674 MPHOSPH9Q99550 1183 aa23.24■■□□□ 1.31
LCE3A-201ENST00000335674 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
LCE3A-201ENST00000335674 MST1RQ04912 1400 aa23.24■■□□□ 1.31
LCE3A-201ENST00000335674 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
LCE3A-201ENST00000335674 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
LCE3A-201ENST00000335674 BRINP3Q76B58 766 aa23.22■■□□□ 1.31
LCE3A-201ENST00000335674 SPATA31E1Q6ZUB1 1445 aa23.22■■□□□ 1.31
LCE3A-201ENST00000335674 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
LCE3A-201ENST00000335674 FOXD1Q16676 465 aa23.21■■□□□ 1.31
LCE3A-201ENST00000335674 NHSL1Q5SYE7 1610 aa23.2■■□□□ 1.3
LCE3A-201ENST00000335674 SETD5Q9C0A6 1442 aa23.2■■□□□ 1.3
LCE3A-201ENST00000335674 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
LCE3A-201ENST00000335674 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
LCE3A-201ENST00000335674 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
LCE3A-201ENST00000335674 LAMC1P11047 1609 aa23.13■■□□□ 1.29
LCE3A-201ENST00000335674 LRP6O75581 1613 aa23.12■■□□□ 1.29
LCE3A-201ENST00000335674 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
LCE3A-201ENST00000335674 TECPR2O15040 1411 aa23.11■■□□□ 1.29
LCE3A-201ENST00000335674 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
LCE3A-201ENST00000335674 PIK3C2GO75747 1445 aa23.1■■□□□ 1.29
LCE3A-201ENST00000335674 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
LCE3A-201ENST00000335674 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
LCE3A-201ENST00000335674 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
LCE3A-201ENST00000335674 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
LCE3A-201ENST00000335674 CDC42BPGQ6DT37 1551 aa23.08■■□□□ 1.29
LCE3A-201ENST00000335674 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
LCE3A-201ENST00000335674 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
LCE3A-201ENST00000335674 LRPPRCP42704 1394 aaKnown RBP23.05■■□□□ 1.28
LCE3A-201ENST00000335674 MYOM2P54296 1465 aa23.05■■□□□ 1.28
LCE3A-201ENST00000335674 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
LCE3A-201ENST00000335674 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.28
LCE3A-201ENST00000335674 ZNF772Q68DY9 489 aaPredicted RBP23.01■■□□□ 1.27
LCE3A-201ENST00000335674 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
LCE3A-201ENST00000335674 HRCP23327 699 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms