RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.73
TUBB2A-201ENST00000333628 LTBP4Q8N2S1 1624 aa19.58■□□□□ 0.73
TUBB2A-201ENST00000333628 ZNF335Q9H4Z2 1342 aaPredicted RBP19.58■□□□□ 0.72
TUBB2A-201ENST00000333628 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
TUBB2A-201ENST00000333628 CHGAP10645 457 aaKnown RBP19.56■□□□□ 0.72
TUBB2A-201ENST00000333628 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
TUBB2A-201ENST00000333628 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
TUBB2A-201ENST00000333628 TRPM2O94759 1503 aa19.53■□□□□ 0.72
TUBB2A-201ENST00000333628 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
TUBB2A-201ENST00000333628 KIF1BO60333 1816 aa19.5■□□□□ 0.71
TUBB2A-201ENST00000333628 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
TUBB2A-201ENST00000333628 STRCP1A6NGW2 1772 aa19.5■□□□□ 0.71
TUBB2A-201ENST00000333628 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
TUBB2A-201ENST00000333628 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
TUBB2A-201ENST00000333628 NUTM2DQ5VT03 806 aaPredicted RBP19.48■□□□□ 0.71
TUBB2A-201ENST00000333628 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
TUBB2A-201ENST00000333628 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
TUBB2A-201ENST00000333628 CLSPNQ9HAW4 1339 aa19.46■□□□□ 0.71
TUBB2A-201ENST00000333628 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
TUBB2A-201ENST00000333628 SLC26A8Q96RN1 970 aa19.44■□□□□ 0.7
TUBB2A-201ENST00000333628 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
TUBB2A-201ENST00000333628 HDGFP51858 240 aaKnown RBP19.42■□□□□ 0.7
TUBB2A-201ENST00000333628 BCANQ96GW7 911 aa19.42■□□□□ 0.7
TUBB2A-201ENST00000333628 PLEKHG1Q9ULL1 1385 aa19.41■□□□□ 0.7
TUBB2A-201ENST00000333628 CPS1P31327 1500 aa19.41■□□□□ 0.7
TUBB2A-201ENST00000333628 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
TUBB2A-201ENST00000333628 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
TUBB2A-201ENST00000333628 NEXMIFQ5QGS0 1516 aa19.39■□□□□ 0.69
TUBB2A-201ENST00000333628 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
TUBB2A-201ENST00000333628 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
TUBB2A-201ENST00000333628 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
TUBB2A-201ENST00000333628 ADAMTS13Q76LX8 1427 aa19.36■□□□□ 0.69
TUBB2A-201ENST00000333628 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
TUBB2A-201ENST00000333628 SIN3AQ96ST3 1273 aa19.36■□□□□ 0.69
TUBB2A-201ENST00000333628 NRXN3Q9Y4C0 1643 aa19.35■□□□□ 0.69
TUBB2A-201ENST00000333628 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
TUBB2A-201ENST00000333628 PPLO60437 1756 aa19.35■□□□□ 0.69
TUBB2A-201ENST00000333628 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
TUBB2A-201ENST00000333628 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
TUBB2A-201ENST00000333628 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
TUBB2A-201ENST00000333628 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
TUBB2A-201ENST00000333628 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
TUBB2A-201ENST00000333628 KCNA6P17658 529 aa19.32■□□□□ 0.68
TUBB2A-201ENST00000333628 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
TUBB2A-201ENST00000333628 NWD1Q149M9 1564 aa19.31■□□□□ 0.68
TUBB2A-201ENST00000333628 SETBP1Q9Y6X0 1596 aa19.31■□□□□ 0.68
TUBB2A-201ENST00000333628 DIP2AQ14689 1571 aa19.31■□□□□ 0.68
TUBB2A-201ENST00000333628 IFT172Q9UG01 1749 aa19.3■□□□□ 0.68
TUBB2A-201ENST00000333628 UBAP1LF5GYI3 381 aa19.28■□□□□ 0.68
TUBB2A-201ENST00000333628 RBM33Q96EV2 1170 aaKnown RBP19.27■□□□□ 0.68
TUBB2A-201ENST00000333628 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.67
TUBB2A-201ENST00000333628 ADGRF5Q8IZF2 1346 aa19.26■□□□□ 0.67
TUBB2A-201ENST00000333628 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 ALKQ9UM73 1620 aa19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 PROSER2Q86WR7 435 aaPredicted RBP19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 NKTRP30414 1462 aaKnown RBP19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
TUBB2A-201ENST00000333628 METP08581 1390 aa19.24■□□□□ 0.67
TUBB2A-201ENST00000333628 PIK3R4Q99570 1358 aa19.23■□□□□ 0.67
TUBB2A-201ENST00000333628 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
TUBB2A-201ENST00000333628 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
TUBB2A-201ENST00000333628 XRN1Q8IZH2 1706 aaKnown RBP19.21■□□□□ 0.67
TUBB2A-201ENST00000333628 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
TUBB2A-201ENST00000333628 TOM1O60784 492 aa19.2■□□□□ 0.66
TUBB2A-201ENST00000333628 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
TUBB2A-201ENST00000333628 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
TUBB2A-201ENST00000333628 MYOM2P54296 1465 aa19.18■□□□□ 0.66
TUBB2A-201ENST00000333628 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
TUBB2A-201ENST00000333628 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
TUBB2A-201ENST00000333628 PIK3C2GO75747 1445 aa19.16■□□□□ 0.66
TUBB2A-201ENST00000333628 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
TUBB2A-201ENST00000333628 CFAP70Q5T0N1 1121 aa19.15■□□□□ 0.66
TUBB2A-201ENST00000333628 TONSLQ96HA7 1378 aa19.14■□□□□ 0.65
TUBB2A-201ENST00000333628 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.12■□□□□ 0.65
TUBB2A-201ENST00000333628 MSH6P52701 1360 aa19.12■□□□□ 0.65
TUBB2A-201ENST00000333628 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
TUBB2A-201ENST00000333628 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
TUBB2A-201ENST00000333628 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
TUBB2A-201ENST00000333628 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
TUBB2A-201ENST00000333628 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
TUBB2A-201ENST00000333628 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
TUBB2A-201ENST00000333628 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.65
TUBB2A-201ENST00000333628 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.64
TUBB2A-201ENST00000333628 LAMC1P11047 1609 aa19.07■□□□□ 0.64
TUBB2A-201ENST00000333628 HSPA1LP34931 641 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 ROBO1Q9Y6N7 1651 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 STK26Q9P289 416 aa19.06■□□□□ 0.64
TUBB2A-201ENST00000333628 NBPF1Q3BBV0 1214 aa19.04■□□□□ 0.64
TUBB2A-201ENST00000333628 KNDC1Q76NI1 1749 aa19.04■□□□□ 0.64
TUBB2A-201ENST00000333628 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
TUBB2A-201ENST00000333628 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
TUBB2A-201ENST00000333628 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.64
TUBB2A-201ENST00000333628 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
TUBB2A-201ENST00000333628 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
TUBB2A-201ENST00000333628 ATF3P18847 181 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms