RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
EPHB3-201ENST00000330394 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
EPHB3-201ENST00000330394 GRPEL1Q9HAV7 217 aa17.36■□□□□ 0.37
EPHB3-201ENST00000330394 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
EPHB3-201ENST00000330394 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
EPHB3-201ENST00000330394 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
EPHB3-201ENST00000330394 GOLGA6L6A8MZA4 724 aa17.34■□□□□ 0.37
EPHB3-201ENST00000330394 NRDCO43847 1150 aa17.34■□□□□ 0.37
EPHB3-201ENST00000330394 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
EPHB3-201ENST00000330394 RIPK4P57078 832 aa17.33■□□□□ 0.37
EPHB3-201ENST00000330394 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
EPHB3-201ENST00000330394 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
EPHB3-201ENST00000330394 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
EPHB3-201ENST00000330394 MTHFSP49914 203 aa17.32■□□□□ 0.36
EPHB3-201ENST00000330394 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
EPHB3-201ENST00000330394 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
EPHB3-201ENST00000330394 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
EPHB3-201ENST00000330394 HMMRO75330 724 aa17.31■□□□□ 0.36
EPHB3-201ENST00000330394 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
EPHB3-201ENST00000330394 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
EPHB3-201ENST00000330394 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
EPHB3-201ENST00000330394 MLECQ14165 292 aa17.3■□□□□ 0.36
EPHB3-201ENST00000330394 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
EPHB3-201ENST00000330394 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
EPHB3-201ENST00000330394 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
EPHB3-201ENST00000330394 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
EPHB3-201ENST00000330394 PHF14O94880 888 aa17.29■□□□□ 0.36
EPHB3-201ENST00000330394 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
EPHB3-201ENST00000330394 PRPF40AO75400 957 aaKnown RBP17.28■□□□□ 0.36
EPHB3-201ENST00000330394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
EPHB3-201ENST00000330394 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
EPHB3-201ENST00000330394 NUCB2P80303 420 aa17.27■□□□□ 0.36
EPHB3-201ENST00000330394 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.35
EPHB3-201ENST00000330394 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
EPHB3-201ENST00000330394 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
EPHB3-201ENST00000330394 A0A0G2JS52 829 aa17.25■□□□□ 0.35
EPHB3-201ENST00000330394 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
EPHB3-201ENST00000330394 PANK2Q9BZ23 570 aa17.25■□□□□ 0.35
EPHB3-201ENST00000330394 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
EPHB3-201ENST00000330394 RRP9O43818 475 aaKnown RBP17.24■□□□□ 0.35
EPHB3-201ENST00000330394 REC8O95072 547 aa17.24■□□□□ 0.35
EPHB3-201ENST00000330394 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
EPHB3-201ENST00000330394 TPM2P07951 284 aa17.24■□□□□ 0.35
EPHB3-201ENST00000330394 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
EPHB3-201ENST00000330394 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
EPHB3-201ENST00000330394 HMOX1P09601 288 aa17.23■□□□□ 0.35
EPHB3-201ENST00000330394 CSPP1Q1MSJ5 1256 aa17.23■□□□□ 0.35
EPHB3-201ENST00000330394 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
EPHB3-201ENST00000330394 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
EPHB3-201ENST00000330394 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
EPHB3-201ENST00000330394 IGHDP01880 384 aa17.23■□□□□ 0.35
EPHB3-201ENST00000330394 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
EPHB3-201ENST00000330394 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
EPHB3-201ENST00000330394 TNNT3P45378 269 aaPredicted RBP17.22■□□□□ 0.35
EPHB3-201ENST00000330394 SLC12A5Q9H2X9 1139 aa17.22■□□□□ 0.35
EPHB3-201ENST00000330394 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
EPHB3-201ENST00000330394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
EPHB3-201ENST00000330394 CCDC173Q0VFZ6 552 aa17.21■□□□□ 0.35
EPHB3-201ENST00000330394 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
EPHB3-201ENST00000330394 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
EPHB3-201ENST00000330394 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
EPHB3-201ENST00000330394 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
EPHB3-201ENST00000330394 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
EPHB3-201ENST00000330394 CDC45O75419 566 aa17.19■□□□□ 0.34
EPHB3-201ENST00000330394 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
EPHB3-201ENST00000330394 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
EPHB3-201ENST00000330394 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
EPHB3-201ENST00000330394 NEK4P51957 841 aa17.18■□□□□ 0.34
EPHB3-201ENST00000330394 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
EPHB3-201ENST00000330394 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
EPHB3-201ENST00000330394 AAMPQ13685 434 aa17.18■□□□□ 0.34
EPHB3-201ENST00000330394 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
EPHB3-201ENST00000330394 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
EPHB3-201ENST00000330394 PTPRGP23470 1445 aa17.17■□□□□ 0.34
EPHB3-201ENST00000330394 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
EPHB3-201ENST00000330394 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
EPHB3-201ENST00000330394 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
EPHB3-201ENST00000330394 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
EPHB3-201ENST00000330394 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
EPHB3-201ENST00000330394 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 UQCRHLA0A096LP55 91 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 UQCRHP07919 91 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 MAP7D2Q96T17 732 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
EPHB3-201ENST00000330394 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
EPHB3-201ENST00000330394 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
EPHB3-201ENST00000330394 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
EPHB3-201ENST00000330394 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 SEC24BO95487 1268 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms