RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
MRPL54-201ENST00000330133 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
MRPL54-201ENST00000330133 ZFYVE9O95405 1425 aa27.91■■■□□ 2.06
MRPL54-201ENST00000330133 IQGAP1P46940 1657 aa27.89■■■□□ 2.06
MRPL54-201ENST00000330133 CERKQ8TCT0 537 aa27.89■■■□□ 2.06
MRPL54-201ENST00000330133 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.06
MRPL54-201ENST00000330133 NUTM2DQ5VT03 806 aaPredicted RBP27.88■■■□□ 2.05
MRPL54-201ENST00000330133 MYO5BQ9ULV0 1848 aa27.86■■■□□ 2.05
MRPL54-201ENST00000330133 PLEKHG1Q9ULL1 1385 aa27.85■■■□□ 2.05
MRPL54-201ENST00000330133 SENP3Q9H4L4 574 aaPredicted RBP27.84■■■□□ 2.05
MRPL54-201ENST00000330133 SLC26A8Q96RN1 970 aa27.83■■■□□ 2.05
MRPL54-201ENST00000330133 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
MRPL54-201ENST00000330133 RPGRIP1LQ68CZ1 1315 aa27.81■■■□□ 2.04
MRPL54-201ENST00000330133 KIF1BO60333 1816 aa27.8■■■□□ 2.04
MRPL54-201ENST00000330133 RGL3Q3MIN7 710 aa27.78■■■□□ 2.04
MRPL54-201ENST00000330133 ANKRD30BQ9BXX2 1392 aa27.77■■■□□ 2.04
MRPL54-201ENST00000330133 VGFO15240 615 aaPredicted RBP27.77■■■□□ 2.04
MRPL54-201ENST00000330133 TBX22Q9Y458 520 aa27.76■■■□□ 2.03
MRPL54-201ENST00000330133 CPS1P31327 1500 aa27.72■■■□□ 2.03
MRPL54-201ENST00000330133 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
MRPL54-201ENST00000330133 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
MRPL54-201ENST00000330133 KCNA6P17658 529 aa27.71■■■□□ 2.03
MRPL54-201ENST00000330133 FBXO41Q8TF61 875 aa27.69■■■□□ 2.02
MRPL54-201ENST00000330133 ADAMTS13Q76LX8 1427 aa27.68■■■□□ 2.02
MRPL54-201ENST00000330133 IQSEC2Q5JU85 1478 aa27.67■■■□□ 2.02
MRPL54-201ENST00000330133 DIP2AQ14689 1571 aa27.64■■■□□ 2.01
MRPL54-201ENST00000330133 PIK3R4Q99570 1358 aa27.62■■■□□ 2.01
MRPL54-201ENST00000330133 SETBP1Q9Y6X0 1596 aa27.62■■■□□ 2.01
MRPL54-201ENST00000330133 ILDR1Q86SU0 546 aaPredicted RBP27.61■■■□□ 2.01
MRPL54-201ENST00000330133 PROSER2Q86WR7 435 aaPredicted RBP27.61■■■□□ 2.01
MRPL54-201ENST00000330133 LRRC7Q96NW7 1537 aa27.6■■■□□ 2.01
MRPL54-201ENST00000330133 ADGRF5Q8IZF2 1346 aa27.6■■■□□ 2.01
MRPL54-201ENST00000330133 STRCP1A6NGW2 1772 aa27.58■■■□□ 2.01
MRPL54-201ENST00000330133 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
MRPL54-201ENST00000330133 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
MRPL54-201ENST00000330133 PPLO60437 1756 aa27.57■■■□□ 2
MRPL54-201ENST00000330133 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
MRPL54-201ENST00000330133 METP08581 1390 aa27.55■■■□□ 2
MRPL54-201ENST00000330133 DHX57Q6P158 1386 aaKnown RBP27.55■■■□□ 2
MRPL54-201ENST00000330133 NRXN3Q9Y4C0 1643 aa27.55■■■□□ 2
MRPL54-201ENST00000330133 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
MRPL54-201ENST00000330133 NWD1Q149M9 1564 aa27.53■■■□□ 2
MRPL54-201ENST00000330133 TMEM94Q12767 1356 aa27.52■■■□□ 2
MRPL54-201ENST00000330133 DCAF11Q8TEB1 546 aa27.52■■■□□ 2
MRPL54-201ENST00000330133 PTPRUQ92729 1446 aa27.51■■□□□ 1.99
MRPL54-201ENST00000330133 TOM1O60784 492 aa27.51■■□□□ 1.99
MRPL54-201ENST00000330133 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
MRPL54-201ENST00000330133 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
MRPL54-201ENST00000330133 RBM33Q96EV2 1170 aaKnown RBP27.5■■□□□ 1.99
MRPL54-201ENST00000330133 CHD2O14647 1828 aaKnown RBP27.5■■□□□ 1.99
MRPL54-201ENST00000330133 ALKQ9UM73 1620 aa27.49■■□□□ 1.99
MRPL54-201ENST00000330133 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
MRPL54-201ENST00000330133 MYOM2P54296 1465 aa27.47■■□□□ 1.99
MRPL54-201ENST00000330133 SIN3AQ96ST3 1273 aa27.46■■□□□ 1.99
MRPL54-201ENST00000330133 PIK3C2GO75747 1445 aa27.46■■□□□ 1.99
MRPL54-201ENST00000330133 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
MRPL54-201ENST00000330133 C14orf37Q86TY3 774 aa27.44■■□□□ 1.98
MRPL54-201ENST00000330133 C14orf93Q9H972 538 aaKnown RBP27.44■■□□□ 1.98
MRPL54-201ENST00000330133 NCOA3Q9Y6Q9 1424 aa27.42■■□□□ 1.98
MRPL54-201ENST00000330133 NRXN1Q9ULB1 1477 aa27.42■■□□□ 1.98
MRPL54-201ENST00000330133 CFAP70Q5T0N1 1121 aa27.41■■□□□ 1.98
MRPL54-201ENST00000330133 SCAF1Q9H7N4 1312 aaKnown RBP27.41■■□□□ 1.98
MRPL54-201ENST00000330133 MSH6P52701 1360 aa27.4■■□□□ 1.98
MRPL54-201ENST00000330133 PIP4K2BP78356 416 aa27.4■■□□□ 1.98
MRPL54-201ENST00000330133 TMEM132EQ6IEE7 984 aa27.4■■□□□ 1.98
MRPL54-201ENST00000330133 STK26Q9P289 416 aa27.38■■□□□ 1.97
MRPL54-201ENST00000330133 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
MRPL54-201ENST00000330133 SETD1AO15047 1707 aaKnown RBP27.36■■□□□ 1.97
MRPL54-201ENST00000330133 C19orf44Q9H6X5 657 aa27.36■■□□□ 1.97
MRPL54-201ENST00000330133 LRPPRCP42704 1394 aaKnown RBP27.35■■□□□ 1.97
MRPL54-201ENST00000330133 XIRP1Q702N8 1843 aaKnown RBP27.34■■□□□ 1.97
MRPL54-201ENST00000330133 L3MBTL2Q969R5 705 aa27.34■■□□□ 1.97
MRPL54-201ENST00000330133 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
MRPL54-201ENST00000330133 PTCH1Q13635 1447 aa27.33■■□□□ 1.96
MRPL54-201ENST00000330133 ATF3P18847 181 aa27.32■■□□□ 1.96
MRPL54-201ENST00000330133 ABCC11Q96J66 1382 aa27.31■■□□□ 1.96
MRPL54-201ENST00000330133 CADPS2Q86UW7 1296 aa27.3■■□□□ 1.96
MRPL54-201ENST00000330133 PRAG1Q86YV5 1406 aa27.3■■□□□ 1.96
MRPL54-201ENST00000330133 YTHDC2Q9H6S0 1430 aaKnown RBP27.3■■□□□ 1.96
MRPL54-201ENST00000330133 LAMC1P11047 1609 aa27.29■■□□□ 1.96
MRPL54-201ENST00000330133 ASXL1Q8IXJ9 1541 aa27.27■■□□□ 1.96
MRPL54-201ENST00000330133 SLAIN2Q9P270 581 aa27.27■■□□□ 1.96
MRPL54-201ENST00000330133 SIRT1Q96EB6 747 aa27.26■■□□□ 1.95
MRPL54-201ENST00000330133 TECPR2O15040 1411 aa27.25■■□□□ 1.95
MRPL54-201ENST00000330133 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
MRPL54-201ENST00000330133 ADGRL3Q9HAR2 1447 aa27.24■■□□□ 1.95
MRPL54-201ENST00000330133 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
MRPL54-201ENST00000330133 DCCP43146 1447 aa27.22■■□□□ 1.95
MRPL54-201ENST00000330133 FAM135BQ49AJ0 1406 aa27.21■■□□□ 1.95
MRPL54-201ENST00000330133 TRAK1Q9UPV9 953 aa27.2■■□□□ 1.94
MRPL54-201ENST00000330133 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
MRPL54-201ENST00000330133 POGKQ9P215 609 aa27.19■■□□□ 1.94
MRPL54-201ENST00000330133 ADGRB1O14514 1584 aa27.18■■□□□ 1.94
MRPL54-201ENST00000330133 HSPA1LP34931 641 aa27.18■■□□□ 1.94
MRPL54-201ENST00000330133 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
MRPL54-201ENST00000330133 PRAM1Q96QH2 718 aa27.17■■□□□ 1.94
MRPL54-201ENST00000330133 PLEKHH1Q9ULM0 1364 aa27.17■■□□□ 1.94
MRPL54-201ENST00000330133 NBPF1Q3BBV0 1214 aa27.16■■□□□ 1.94
MRPL54-201ENST00000330133 KNDC1Q76NI1 1749 aa27.16■■□□□ 1.94
MRPL54-201ENST00000330133 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms