RNA–Protein interactions for RNA: ENST00000328257.12

PPME1-201, Transcript of protein phosphatase methylesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPME1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-201ENST00000328257 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
PPME1-201ENST00000328257 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
PPME1-201ENST00000328257 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
PPME1-201ENST00000328257 RALBP1Q15311 655 aa16.13■□□□□ 0.17
PPME1-201ENST00000328257 CYB5RLQ6IPT4 315 aa16.13■□□□□ 0.17
PPME1-201ENST00000328257 NUP160Q12769 1436 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 ZNF710Q8N1W2 664 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
PPME1-201ENST00000328257 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 PANK3Q9H999 370 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 CCDC66A2RUB6 948 aa16.12■□□□□ 0.17
PPME1-201ENST00000328257 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
PPME1-201ENST00000328257 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
PPME1-201ENST00000328257 MYRIPQ8NFW9 859 aa16.11■□□□□ 0.17
PPME1-201ENST00000328257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.1■□□□□ 0.17
PPME1-201ENST00000328257 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.1■□□□□ 0.17
PPME1-201ENST00000328257 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
PPME1-201ENST00000328257 PLIN1O60240 522 aa16.09■□□□□ 0.17
PPME1-201ENST00000328257 IGF1RP08069 1367 aa16.08■□□□□ 0.17
PPME1-201ENST00000328257 CAPN2P17655 700 aa16.08■□□□□ 0.16
PPME1-201ENST00000328257 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
PPME1-201ENST00000328257 TULP2O00295 520 aa16.08■□□□□ 0.16
PPME1-201ENST00000328257 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPME1-201ENST00000328257 PRR29P0C7W0 189 aa16.07■□□□□ 0.16
PPME1-201ENST00000328257 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
PPME1-201ENST00000328257 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
PPME1-201ENST00000328257 TSPYL1Q9H0U9 437 aa16.07■□□□□ 0.16
PPME1-201ENST00000328257 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
PPME1-201ENST00000328257 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
PPME1-201ENST00000328257 ZKSCAN5Q9Y2L8 839 aa16.06■□□□□ 0.16
PPME1-201ENST00000328257 CUL7Q14999 1698 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 MCM5P33992 734 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
PPME1-201ENST00000328257 TSC1Q92574 1164 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
PPME1-201ENST00000328257 SEC24BO95487 1268 aa16.03■□□□□ 0.16
PPME1-201ENST00000328257 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
PPME1-201ENST00000328257 POLR3GLQ9BT43 218 aa16.03■□□□□ 0.16
PPME1-201ENST00000328257 CARD10Q9BWT7 1032 aa16.03■□□□□ 0.16
PPME1-201ENST00000328257 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
PPME1-201ENST00000328257 GABPB1Q06547 395 aaPredicted RBP16.02■□□□□ 0.16
PPME1-201ENST00000328257 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
PPME1-201ENST00000328257 EFCC1Q9HA90 598 aa16.02■□□□□ 0.16
PPME1-201ENST00000328257 SKOR2Q2VWA4 1001 aaPredicted RBP16.02■□□□□ 0.16
PPME1-201ENST00000328257 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.15
PPME1-201ENST00000328257 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
PPME1-201ENST00000328257 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
PPME1-201ENST00000328257 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
PPME1-201ENST00000328257 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
PPME1-201ENST00000328257 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
PPME1-201ENST00000328257 PHF14O94880 888 aa16■□□□□ 0.15
PPME1-201ENST00000328257 HMGN5P82970 282 aaKnown RBP16■□□□□ 0.15
PPME1-201ENST00000328257 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
PPME1-201ENST00000328257 EP400NLQ6ZTU2 488 aa15.99■□□□□ 0.15
PPME1-201ENST00000328257 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
PPME1-201ENST00000328257 U2AF2P26368 475 aaKnown RBP eCLIP15.99■□□□□ 0.159e-15■■■■■ 42.2
PPME1-201ENST00000328257 MLECQ14165 292 aa15.99■□□□□ 0.15
PPME1-201ENST00000328257 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
PPME1-201ENST00000328257 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
PPME1-201ENST00000328257 FEZ1Q99689 392 aa15.98■□□□□ 0.15
PPME1-201ENST00000328257 SLFN14P0C7P3 912 aa15.98■□□□□ 0.15
PPME1-201ENST00000328257 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
PPME1-201ENST00000328257 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
PPME1-201ENST00000328257 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
PPME1-201ENST00000328257 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
PPME1-201ENST00000328257 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
PPME1-201ENST00000328257 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
PPME1-201ENST00000328257 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.15
PPME1-201ENST00000328257 TICAM2Q86XR7 235 aa15.96■□□□□ 0.15
PPME1-201ENST00000328257 JPH4Q96JJ6 628 aa15.96■□□□□ 0.15
PPME1-201ENST00000328257 PDLIM2Q96JY6 352 aa15.96■□□□□ 0.15
PPME1-201ENST00000328257 OGFRQ9NZT2 677 aa15.96■□□□□ 0.15
PPME1-201ENST00000328257 NLRP1Q9C000 1473 aa15.96■□□□□ 0.15
PPME1-201ENST00000328257 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.95■□□□□ 0.14
PPME1-201ENST00000328257 EGFL6Q8IUX8 553 aa15.95■□□□□ 0.14
PPME1-201ENST00000328257 MCCP23508 829 aa15.94■□□□□ 0.14
PPME1-201ENST00000328257 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
PPME1-201ENST00000328257 FEZ2Q9UHY8 353 aaPredicted RBP15.94■□□□□ 0.14
PPME1-201ENST00000328257 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
PPME1-201ENST00000328257 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
PPME1-201ENST00000328257 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
PPME1-201ENST00000328257 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
PPME1-201ENST00000328257 CCDC9Q9Y3X0 531 aaKnown RBP15.93■□□□□ 0.14
PPME1-201ENST00000328257 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
PPME1-201ENST00000328257 SIRT1Q96EB6 747 aa15.92■□□□□ 0.14
PPME1-201ENST00000328257 GBP4Q96PP9 640 aa15.92■□□□□ 0.14
PPME1-201ENST00000328257 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
PPME1-201ENST00000328257 MYCBPQ99417 103 aaPredicted RBP15.91■□□□□ 0.14
PPME1-201ENST00000328257 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
PPME1-201ENST00000328257 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
PPME1-201ENST00000328257 GTF2A1P52655 376 aaPredicted RBP15.9■□□□□ 0.14
PPME1-201ENST00000328257 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
PPME1-201ENST00000328257 TRERF1Q96PN7 1200 aa15.9■□□□□ 0.14
PPME1-201ENST00000328257 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
PPME1-201ENST00000328257 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 465.1 ms