RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 E9PCH4 1651 aa27.01■■□□□ 1.91
PTPMT1-201ENST00000326656 MED1Q15648 1581 aaPredicted RBP27.01■■□□□ 1.91
PTPMT1-201ENST00000326656 ITGAEP38570 1179 aa27■■□□□ 1.91
PTPMT1-201ENST00000326656 ABCF1Q8NE71 845 aaKnown RBP eCLIP27■■□□□ 1.91
PTPMT1-201ENST00000326656 PLEKHG1Q9ULL1 1385 aa26.99■■□□□ 1.91
PTPMT1-201ENST00000326656 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
PTPMT1-201ENST00000326656 BCANQ96GW7 911 aa26.98■■□□□ 1.91
PTPMT1-201ENST00000326656 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
PTPMT1-201ENST00000326656 RIMS2Q9UQ26 1411 aa26.98■■□□□ 1.91
PTPMT1-201ENST00000326656 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
PTPMT1-201ENST00000326656 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
PTPMT1-201ENST00000326656 PPP1R15AO75807 674 aaPredicted RBP26.96■■□□□ 1.91
PTPMT1-201ENST00000326656 PROSER2Q86WR7 435 aaPredicted RBP26.96■■□□□ 1.91
PTPMT1-201ENST00000326656 NKTRP30414 1462 aaKnown RBP26.95■■□□□ 1.91
PTPMT1-201ENST00000326656 TBX22Q9Y458 520 aa26.94■■□□□ 1.9
PTPMT1-201ENST00000326656 NWD1Q149M9 1564 aa26.93■■□□□ 1.9
PTPMT1-201ENST00000326656 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
PTPMT1-201ENST00000326656 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
PTPMT1-201ENST00000326656 CHGAP10645 457 aaKnown RBP26.91■■□□□ 1.9
PTPMT1-201ENST00000326656 CHD2O14647 1828 aaKnown RBP26.89■■□□□ 1.9
PTPMT1-201ENST00000326656 PIK3R4Q99570 1358 aa26.85■■□□□ 1.89
PTPMT1-201ENST00000326656 MSH6P52701 1360 aa26.84■■□□□ 1.89
PTPMT1-201ENST00000326656 NCOA3Q9Y6Q9 1424 aa26.84■■□□□ 1.89
PTPMT1-201ENST00000326656 PHF23Q9BUL5 403 aaPredicted RBP26.84■■□□□ 1.89
PTPMT1-201ENST00000326656 DIP2AQ14689 1571 aa26.83■■□□□ 1.89
PTPMT1-201ENST00000326656 ADAMTS13Q76LX8 1427 aa26.82■■□□□ 1.88
PTPMT1-201ENST00000326656 SPHKAPQ2M3C7 1700 aa26.8■■□□□ 1.88
PTPMT1-201ENST00000326656 RBM33Q96EV2 1170 aaKnown RBP26.8■■□□□ 1.88
PTPMT1-201ENST00000326656 NAIPQ13075 1403 aa26.8■■□□□ 1.88
PTPMT1-201ENST00000326656 SLAIN2Q9P270 581 aa26.78■■□□□ 1.88
PTPMT1-201ENST00000326656 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
PTPMT1-201ENST00000326656 ROBO1Q9Y6N7 1651 aa26.75■■□□□ 1.87
PTPMT1-201ENST00000326656 TRPM2O94759 1503 aa26.74■■□□□ 1.87
PTPMT1-201ENST00000326656 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
PTPMT1-201ENST00000326656 C19orf44Q9H6X5 657 aa26.72■■□□□ 1.87
PTPMT1-201ENST00000326656 ZNF326Q5BKZ1 582 aaKnown RBP26.7■■□□□ 1.86
PTPMT1-201ENST00000326656 C14orf37Q86TY3 774 aa26.69■■□□□ 1.86
PTPMT1-201ENST00000326656 CADPS2Q86UW7 1296 aa26.69■■□□□ 1.86
PTPMT1-201ENST00000326656 AMOTL2Q9Y2J4 779 aa26.69■■□□□ 1.86
PTPMT1-201ENST00000326656 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
PTPMT1-201ENST00000326656 ATF3P18847 181 aa26.65■■□□□ 1.86
PTPMT1-201ENST00000326656 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
PTPMT1-201ENST00000326656 CLTCL1P53675 1640 aa26.65■■□□□ 1.86
PTPMT1-201ENST00000326656 KIF1BO60333 1816 aa26.64■■□□□ 1.85
PTPMT1-201ENST00000326656 NRXN3Q9Y4C0 1643 aa26.64■■□□□ 1.85
PTPMT1-201ENST00000326656 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
PTPMT1-201ENST00000326656 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.62■■□□□ 1.85
PTPMT1-201ENST00000326656 RGS17Q9UGC6 210 aaPredicted RBP26.62■■□□□ 1.85
PTPMT1-201ENST00000326656 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
PTPMT1-201ENST00000326656 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
PTPMT1-201ENST00000326656 PHLPP1O60346 1717 aa26.6■■□□□ 1.85
PTPMT1-201ENST00000326656 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
PTPMT1-201ENST00000326656 RPGRIP1LQ68CZ1 1315 aa26.59■■□□□ 1.85
PTPMT1-201ENST00000326656 XRN1Q8IZH2 1706 aaKnown RBP26.59■■□□□ 1.85
PTPMT1-201ENST00000326656 JCADQ9P266 1359 aa26.58■■□□□ 1.85
PTPMT1-201ENST00000326656 DCCP43146 1447 aa26.58■■□□□ 1.85
PTPMT1-201ENST00000326656 METP08581 1390 aa26.57■■□□□ 1.84
PTPMT1-201ENST00000326656 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
PTPMT1-201ENST00000326656 COL16A1Q07092 1604 aaPredicted RBP26.52■■□□□ 1.84
PTPMT1-201ENST00000326656 AHDC1Q5TGY3 1603 aaPredicted RBP26.5■■□□□ 1.83
PTPMT1-201ENST00000326656 SPATA31A6Q5VVP1 1343 aa26.49■■□□□ 1.83
PTPMT1-201ENST00000326656 BRINP3Q76B58 766 aa26.48■■□□□ 1.83
PTPMT1-201ENST00000326656 POTEAQ6S8J7 498 aa26.45■■□□□ 1.82
PTPMT1-201ENST00000326656 ADGRL3Q9HAR2 1447 aa26.45■■□□□ 1.82
PTPMT1-201ENST00000326656 MST1RQ04912 1400 aa26.43■■□□□ 1.82
PTPMT1-201ENST00000326656 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
PTPMT1-201ENST00000326656 PPLO60437 1756 aa26.43■■□□□ 1.82
PTPMT1-201ENST00000326656 PTCH1Q13635 1447 aa26.42■■□□□ 1.82
PTPMT1-201ENST00000326656 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
PTPMT1-201ENST00000326656 SETD1AO15047 1707 aaKnown RBP26.41■■□□□ 1.82
PTPMT1-201ENST00000326656 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
PTPMT1-201ENST00000326656 CCDC144AA2RUR9 1427 aa26.4■■□□□ 1.82
PTPMT1-201ENST00000326656 ASXL1Q8IXJ9 1541 aa26.39■■□□□ 1.82
PTPMT1-201ENST00000326656 FOXD1Q16676 465 aa26.38■■□□□ 1.81
PTPMT1-201ENST00000326656 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
PTPMT1-201ENST00000326656 LRRC59Q96AG4 307 aaKnown RBP26.36■■□□□ 1.81
PTPMT1-201ENST00000326656 NALCNQ8IZF0 1738 aa26.36■■□□□ 1.81
PTPMT1-201ENST00000326656 ANKRD30BQ9BXX2 1392 aa26.35■■□□□ 1.81
PTPMT1-201ENST00000326656 NHSL1Q5SYE7 1610 aa26.35■■□□□ 1.81
PTPMT1-201ENST00000326656 ROBO2Q9HCK4 1378 aa26.34■■□□□ 1.81
PTPMT1-201ENST00000326656 SPATA31E1Q6ZUB1 1445 aa26.34■■□□□ 1.81
PTPMT1-201ENST00000326656 MEX3CQ5U5Q3 659 aaKnown RBP26.33■■□□□ 1.81
PTPMT1-201ENST00000326656 ZNF772Q68DY9 489 aaPredicted RBP26.32■■□□□ 1.8
PTPMT1-201ENST00000326656 LRP6O75581 1613 aa26.32■■□□□ 1.8
PTPMT1-201ENST00000326656 C1orf167Q5SNV9 1468 aa26.3■■□□□ 1.8
PTPMT1-201ENST00000326656 RGL3Q3MIN7 710 aa26.29■■□□□ 1.8
PTPMT1-201ENST00000326656 ADGRF5Q8IZF2 1346 aa26.29■■□□□ 1.8
PTPMT1-201ENST00000326656 IFT172Q9UG01 1749 aa26.26■■□□□ 1.79
PTPMT1-201ENST00000326656 LAMC1P11047 1609 aa26.26■■□□□ 1.79
PTPMT1-201ENST00000326656 TECPR2O15040 1411 aa26.23■■□□□ 1.79
PTPMT1-201ENST00000326656 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
PTPMT1-201ENST00000326656 NUTM2BA6NNL0 878 aaPredicted RBP26.22■■□□□ 1.79
PTPMT1-201ENST00000326656 NUTM2EB1AL46 878 aaPredicted RBP26.22■■□□□ 1.79
PTPMT1-201ENST00000326656 NUTM2AQ8IVF1 878 aaPredicted RBP26.22■■□□□ 1.79
PTPMT1-201ENST00000326656 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
PTPMT1-201ENST00000326656 SOS2Q07890 1332 aaPredicted RBP26.21■■□□□ 1.79
PTPMT1-201ENST00000326656 PIK3C2GO75747 1445 aa26.21■■□□□ 1.79
PTPMT1-201ENST00000326656 PNPLA6Q8IY17 1366 aa26.2■■□□□ 1.79
PTPMT1-201ENST00000326656 DDX17Q92841 729 aaKnown RBP26.2■■□□□ 1.78
PTPMT1-201ENST00000326656 ORAI2Q96SN7 254 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms