RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PANK3Q9H999 370 aa28.93■■■□□ 2.22
LIMS2-201ENST00000324938 NEO1Q92859 1461 aa28.91■■■□□ 2.22
LIMS2-201ENST00000324938 MYOM1P52179 1685 aa28.91■■■□□ 2.22
LIMS2-201ENST00000324938 ADGRB3O60242 1522 aa28.9■■■□□ 2.22
LIMS2-201ENST00000324938 EIF3AQ14152 1382 aaKnown RBP28.9■■■□□ 2.22
LIMS2-201ENST00000324938 PPP4R2Q9NY27 417 aa28.89■■■□□ 2.22
LIMS2-201ENST00000324938 NRXN1Q9ULB1 1477 aa28.88■■■□□ 2.21
LIMS2-201ENST00000324938 ZMYM4Q5VZL5 1548 aa28.87■■■□□ 2.21
LIMS2-201ENST00000324938 KDM5AP29375 1690 aaKnown RBP28.87■■■□□ 2.21
LIMS2-201ENST00000324938 CDCA8Q53HL2 280 aa28.85■■■□□ 2.21
LIMS2-201ENST00000324938 INSRP06213 1382 aa28.84■■■□□ 2.21
LIMS2-201ENST00000324938 PPLO60437 1756 aa28.84■■■□□ 2.21
LIMS2-201ENST00000324938 NPATQ14207 1427 aa28.83■■■□□ 2.21
LIMS2-201ENST00000324938 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
LIMS2-201ENST00000324938 CC2D1BQ5T0F9 858 aaKnown RBP28.83■■■□□ 2.21
LIMS2-201ENST00000324938 MYO3AQ8NEV4 1616 aa28.83■■■□□ 2.21
LIMS2-201ENST00000324938 ABCC3O15438 1527 aa28.82■■■□□ 2.2
LIMS2-201ENST00000324938 CFAP65Q6ZU64 1925 aaKnown RBP28.82■■■□□ 2.2
LIMS2-201ENST00000324938 CAMSAP1Q5T5Y3 1602 aa28.82■■■□□ 2.2
LIMS2-201ENST00000324938 RICTORQ6R327 1708 aa28.82■■■□□ 2.2
LIMS2-201ENST00000324938 DIP2CQ9Y2E4 1556 aa28.8■■■□□ 2.2
LIMS2-201ENST00000324938 SETBP1Q9Y6X0 1596 aa28.79■■■□□ 2.2
LIMS2-201ENST00000324938 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
LIMS2-201ENST00000324938 BLMP54132 1417 aaPredicted RBP28.77■■■□□ 2.2
LIMS2-201ENST00000324938 CFAP70Q5T0N1 1121 aa28.76■■■□□ 2.2
LIMS2-201ENST00000324938 ASXL1Q8IXJ9 1541 aa28.75■■■□□ 2.19
LIMS2-201ENST00000324938 SIGLEC1Q9BZZ2 1709 aa28.75■■■□□ 2.19
LIMS2-201ENST00000324938 NOS1P29475 1434 aa28.74■■■□□ 2.19
LIMS2-201ENST00000324938 SLC24A1O60721 1099 aa28.73■■■□□ 2.19
LIMS2-201ENST00000324938 ERVK-7P63135 1459 aa28.73■■■□□ 2.19
LIMS2-201ENST00000324938 ZC3H13Q5T200 1668 aaKnown RBP28.73■■■□□ 2.19
LIMS2-201ENST00000324938 SENP3-EIF4A1A0A087X0R7 540 aa28.72■■■□□ 2.19
LIMS2-201ENST00000324938 GGT6Q6P531 493 aa28.72■■■□□ 2.19
LIMS2-201ENST00000324938 KNSTRNQ9Y448 316 aa28.72■■■□□ 2.19
LIMS2-201ENST00000324938 PIK3C2BO00750 1634 aa28.72■■■□□ 2.19
LIMS2-201ENST00000324938 AMER1Q5JTC6 1135 aaPredicted RBP28.7■■■□□ 2.18
LIMS2-201ENST00000324938 NPC1L1Q9UHC9 1359 aa28.7■■■□□ 2.18
LIMS2-201ENST00000324938 GLI2P10070 1586 aa28.7■■■□□ 2.18
LIMS2-201ENST00000324938 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
LIMS2-201ENST00000324938 SBNO2Q9Y2G9 1366 aa28.69■■■□□ 2.18
LIMS2-201ENST00000324938 PDE3BQ13370 1112 aa28.68■■■□□ 2.18
LIMS2-201ENST00000324938 RAPGEF3O95398 923 aa28.67■■■□□ 2.18
LIMS2-201ENST00000324938 RBM19Q9Y4C8 960 aaKnown RBP28.67■■■□□ 2.18
LIMS2-201ENST00000324938 ADGRB1O14514 1584 aa28.64■■■□□ 2.18
LIMS2-201ENST00000324938 B4GALNT3Q6L9W6 998 aa28.64■■■□□ 2.18
LIMS2-201ENST00000324938 QRICH2Q9H0J4 1663 aa28.64■■■□□ 2.17
LIMS2-201ENST00000324938 RPGRIP1LQ68CZ1 1315 aa28.63■■■□□ 2.17
LIMS2-201ENST00000324938 PPP2R1AP30153 589 aa28.63■■■□□ 2.17
LIMS2-201ENST00000324938 CHGAP10645 457 aaKnown RBP28.62■■■□□ 2.17
LIMS2-201ENST00000324938 ARHGAP31Q2M1Z3 1444 aa28.62■■■□□ 2.17
LIMS2-201ENST00000324938 C14orf93Q9H972 538 aaKnown RBP28.58■■■□□ 2.17
LIMS2-201ENST00000324938 NEXMIFQ5QGS0 1516 aa28.58■■■□□ 2.17
LIMS2-201ENST00000324938 YEATS2Q9ULM3 1422 aa28.57■■■□□ 2.16
LIMS2-201ENST00000324938 CENPJQ9HC77 1338 aaPredicted RBP28.56■■■□□ 2.16
LIMS2-201ENST00000324938 SALL2Q9Y467 1007 aaPredicted RBP28.55■■■□□ 2.16
LIMS2-201ENST00000324938 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
LIMS2-201ENST00000324938 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
LIMS2-201ENST00000324938 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
LIMS2-201ENST00000324938 PREX1Q8TCU6 1659 aa28.53■■■□□ 2.16
LIMS2-201ENST00000324938 RRP1P56182 461 aaKnown RBP28.52■■■□□ 2.16
LIMS2-201ENST00000324938 RCAN3Q9UKA8 241 aa28.52■■■□□ 2.16
LIMS2-201ENST00000324938 ARHGEF28Q8N1W1 1705 aaKnown RBP28.52■■■□□ 2.16
LIMS2-201ENST00000324938 ADAMTS8Q9UP79 889 aa28.51■■■□□ 2.15
LIMS2-201ENST00000324938 DIP2BQ9P265 1576 aa28.51■■■□□ 2.15
LIMS2-201ENST00000324938 MYO5BQ9ULV0 1848 aa28.5■■■□□ 2.15
LIMS2-201ENST00000324938 WDR43Q15061 677 aaKnown RBP eCLIP28.48■■■□□ 2.15
LIMS2-201ENST00000324938 CDCA7LQ96GN5 454 aa28.48■■■□□ 2.15
LIMS2-201ENST00000324938 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
LIMS2-201ENST00000324938 TRAK1Q9UPV9 953 aa28.46■■■□□ 2.15
LIMS2-201ENST00000324938 CCDC136Q96JN2 1154 aa28.45■■■□□ 2.15
LIMS2-201ENST00000324938 CARD14Q9BXL6 1004 aa28.45■■■□□ 2.15
LIMS2-201ENST00000324938 USP32Q8NFA0 1604 aa28.44■■■□□ 2.14
LIMS2-201ENST00000324938 ZFYVE9O95405 1425 aa28.44■■■□□ 2.14
LIMS2-201ENST00000324938 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
LIMS2-201ENST00000324938 VGFO15240 615 aaPredicted RBP28.43■■■□□ 2.14
LIMS2-201ENST00000324938 TMEM132EQ6IEE7 984 aa28.41■■■□□ 2.14
LIMS2-201ENST00000324938 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
LIMS2-201ENST00000324938 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
LIMS2-201ENST00000324938 SLC52A1Q9NWF4 448 aa28.4■■■□□ 2.14
LIMS2-201ENST00000324938 IDI1Q13907 227 aa28.39■■■□□ 2.13
LIMS2-201ENST00000324938 PLEKHH1Q9ULM0 1364 aa28.39■■■□□ 2.13
LIMS2-201ENST00000324938 MYT1Q01538 1121 aa28.37■■■□□ 2.13
LIMS2-201ENST00000324938 TULP4Q9NRJ4 1543 aa28.37■■■□□ 2.13
LIMS2-201ENST00000324938 NSD3Q9BZ95 1437 aa28.37■■■□□ 2.13
LIMS2-201ENST00000324938 ZNF521Q96K83 1311 aa28.36■■■□□ 2.13
LIMS2-201ENST00000324938 FANCIQ9NVI1 1328 aa28.35■■■□□ 2.13
LIMS2-201ENST00000324938 FAM69CQ0P6D2 419 aa28.34■■■□□ 2.13
LIMS2-201ENST00000324938 PUS7Q96PZ0 661 aaKnown RBP28.34■■■□□ 2.13
LIMS2-201ENST00000324938 AGLP35573 1532 aa28.33■■■□□ 2.13
LIMS2-201ENST00000324938 NUTM2DQ5VT03 806 aaPredicted RBP28.32■■■□□ 2.12
LIMS2-201ENST00000324938 EXOC6Q8TAG9 804 aa28.31■■■□□ 2.12
LIMS2-201ENST00000324938 POLR3AO14802 1390 aaPredicted RBP28.31■■■□□ 2.12
LIMS2-201ENST00000324938 SHPRHQ149N8 1683 aa28.31■■■□□ 2.12
LIMS2-201ENST00000324938 EVC2Q86UK5 1308 aa28.28■■■□□ 2.12
LIMS2-201ENST00000324938 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
LIMS2-201ENST00000324938 DUSP27Q5VZP5 1158 aa28.27■■■□□ 2.12
LIMS2-201ENST00000324938 CLTCQ00610 1675 aaKnown RBP28.26■■■□□ 2.11
LIMS2-201ENST00000324938 GOLGA2Q08379 1002 aa28.25■■■□□ 2.11
LIMS2-201ENST00000324938 ANKRD36BQ8N2N9 1353 aa28.24■■■□□ 2.11
LIMS2-201ENST00000324938 PTPRMP28827 1452 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms