RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
TYMS-201ENST00000323224 HSPA1LP34931 641 aa28.58■■■□□ 2.17
TYMS-201ENST00000323224 RIMS2Q9UQ26 1411 aa28.56■■■□□ 2.16
TYMS-201ENST00000323224 CHGAP10645 457 aaKnown RBP28.55■■■□□ 2.16
TYMS-201ENST00000323224 NAIPQ13075 1403 aa28.53■■■□□ 2.16
TYMS-201ENST00000323224 NUTM2DQ5VT03 806 aaPredicted RBP28.51■■■□□ 2.15
TYMS-201ENST00000323224 ILDR2Q71H61 639 aa28.5■■■□□ 2.15
TYMS-201ENST00000323224 BCANQ96GW7 911 aa28.5■■■□□ 2.15
TYMS-201ENST00000323224 SPHKAPQ2M3C7 1700 aa28.5■■■□□ 2.15
TYMS-201ENST00000323224 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
TYMS-201ENST00000323224 KCNA6P17658 529 aa28.48■■■□□ 2.15
TYMS-201ENST00000323224 PLEKHG1Q9ULL1 1385 aa28.48■■■□□ 2.15
TYMS-201ENST00000323224 NWD1Q149M9 1564 aa28.48■■■□□ 2.15
TYMS-201ENST00000323224 PPP1R15AO75807 674 aaPredicted RBP28.46■■■□□ 2.15
TYMS-201ENST00000323224 TMEM94Q12767 1356 aa28.46■■■□□ 2.15
TYMS-201ENST00000323224 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
TYMS-201ENST00000323224 PROSER2Q86WR7 435 aaPredicted RBP28.42■■■□□ 2.14
TYMS-201ENST00000323224 ADAMTS13Q76LX8 1427 aa28.4■■■□□ 2.14
TYMS-201ENST00000323224 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
TYMS-201ENST00000323224 HFM1A2PYH4 1435 aa28.39■■■□□ 2.14
TYMS-201ENST00000323224 CLTCL1P53675 1640 aa28.39■■■□□ 2.14
TYMS-201ENST00000323224 HDGFP51858 240 aaKnown RBP28.38■■■□□ 2.13
TYMS-201ENST00000323224 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
TYMS-201ENST00000323224 MED1Q15648 1581 aaPredicted RBP28.35■■■□□ 2.13
TYMS-201ENST00000323224 TBX22Q9Y458 520 aa28.34■■■□□ 2.13
TYMS-201ENST00000323224 TRPM2O94759 1503 aa28.34■■■□□ 2.13
TYMS-201ENST00000323224 TRIM52Q96A61 297 aa28.33■■■□□ 2.13
TYMS-201ENST00000323224 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
TYMS-201ENST00000323224 DIP2AQ14689 1571 aa28.31■■■□□ 2.12
TYMS-201ENST00000323224 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
TYMS-201ENST00000323224 ROBO1Q9Y6N7 1651 aa28.27■■■□□ 2.12
TYMS-201ENST00000323224 PTPRUQ92729 1446 aa28.27■■■□□ 2.12
TYMS-201ENST00000323224 KIF1BO60333 1816 aa28.26■■■□□ 2.11
TYMS-201ENST00000323224 FAM135BQ49AJ0 1406 aa28.26■■■□□ 2.11
TYMS-201ENST00000323224 NEXMIFQ5QGS0 1516 aa28.25■■■□□ 2.11
TYMS-201ENST00000323224 MSH6P52701 1360 aa28.25■■■□□ 2.11
TYMS-201ENST00000323224 SETBP1Q9Y6X0 1596 aa28.24■■■□□ 2.11
TYMS-201ENST00000323224 SLC4A1APQ9BWU0 796 aaKnown RBP28.23■■■□□ 2.11
TYMS-201ENST00000323224 PIK3R4Q99570 1358 aa28.21■■■□□ 2.11
TYMS-201ENST00000323224 FOXD1Q16676 465 aa28.2■■■□□ 2.11
TYMS-201ENST00000323224 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
TYMS-201ENST00000323224 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
TYMS-201ENST00000323224 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.17■■■□□ 2.1
TYMS-201ENST00000323224 METP08581 1390 aa28.17■■■□□ 2.1
TYMS-201ENST00000323224 SLAIN2Q9P270 581 aa28.16■■■□□ 2.1
TYMS-201ENST00000323224 SOCS7O14512 581 aa28.15■■■□□ 2.1
TYMS-201ENST00000323224 C14orf37Q86TY3 774 aa28.15■■■□□ 2.1
TYMS-201ENST00000323224 NCOA3Q9Y6Q9 1424 aa28.14■■■□□ 2.09
TYMS-201ENST00000323224 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
TYMS-201ENST00000323224 PHLPP1O60346 1717 aa28.09■■■□□ 2.09
TYMS-201ENST00000323224 PPLO60437 1756 aa28.08■■■□□ 2.09
TYMS-201ENST00000323224 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
TYMS-201ENST00000323224 C19orf44Q9H6X5 657 aa28.07■■■□□ 2.08
TYMS-201ENST00000323224 MPHOSPH9Q99550 1183 aa28.06■■■□□ 2.08
TYMS-201ENST00000323224 ATF3P18847 181 aa28.03■■■□□ 2.08
TYMS-201ENST00000323224 COL16A1Q07092 1604 aaPredicted RBP28.03■■■□□ 2.08
TYMS-201ENST00000323224 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
TYMS-201ENST00000323224 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
TYMS-201ENST00000323224 VGFO15240 615 aaPredicted RBP28■■■□□ 2.07
TYMS-201ENST00000323224 NALCNQ8IZF0 1738 aa28■■■□□ 2.07
TYMS-201ENST00000323224 CCDC144AA2RUR9 1427 aa28■■■□□ 2.07
TYMS-201ENST00000323224 RGS17Q9UGC6 210 aaPredicted RBP27.99■■■□□ 2.07
TYMS-201ENST00000323224 RPGRIP1LQ68CZ1 1315 aa27.99■■■□□ 2.07
TYMS-201ENST00000323224 SPATA31E1Q6ZUB1 1445 aa27.97■■■□□ 2.07
TYMS-201ENST00000323224 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
TYMS-201ENST00000323224 IFT172Q9UG01 1749 aa27.96■■■□□ 2.07
TYMS-201ENST00000323224 DCCP43146 1447 aa27.96■■■□□ 2.07
TYMS-201ENST00000323224 AHDC1Q5TGY3 1603 aaPredicted RBP27.95■■■□□ 2.06
TYMS-201ENST00000323224 MST1RQ04912 1400 aa27.95■■■□□ 2.06
TYMS-201ENST00000323224 ADGRL3Q9HAR2 1447 aa27.95■■■□□ 2.06
TYMS-201ENST00000323224 ADGRF5Q8IZF2 1346 aa27.95■■■□□ 2.06
TYMS-201ENST00000323224 BRINP3Q76B58 766 aa27.94■■■□□ 2.06
TYMS-201ENST00000323224 RAB3GAP2Q9H2M9 1393 aa27.94■■■□□ 2.06
TYMS-201ENST00000323224 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
TYMS-201ENST00000323224 JCADQ9P266 1359 aa27.91■■■□□ 2.06
TYMS-201ENST00000323224 ASXL1Q8IXJ9 1541 aa27.91■■■□□ 2.06
TYMS-201ENST00000323224 PTCH1Q13635 1447 aa27.9■■■□□ 2.06
TYMS-201ENST00000323224 PRAG1Q86YV5 1406 aa27.86■■■□□ 2.05
TYMS-201ENST00000323224 LRP6O75581 1613 aa27.86■■■□□ 2.05
TYMS-201ENST00000323224 NHSL1Q5SYE7 1610 aa27.85■■■□□ 2.05
TYMS-201ENST00000323224 SHPRHQ149N8 1683 aa27.84■■■□□ 2.05
TYMS-201ENST00000323224 DDX17Q92841 729 aaKnown RBP27.84■■■□□ 2.05
TYMS-201ENST00000323224 POTEAQ6S8J7 498 aa27.83■■■□□ 2.05
TYMS-201ENST00000323224 ANKRD30BQ9BXX2 1392 aa27.82■■■□□ 2.04
TYMS-201ENST00000323224 PIK3C2GO75747 1445 aa27.8■■■□□ 2.04
TYMS-201ENST00000323224 C1orf167Q5SNV9 1468 aa27.8■■■□□ 2.04
TYMS-201ENST00000323224 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
TYMS-201ENST00000323224 STK26Q9P289 416 aa27.78■■■□□ 2.04
TYMS-201ENST00000323224 ACIN1Q9UKV3 1341 aaKnown RBP27.76■■■□□ 2.03
TYMS-201ENST00000323224 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
TYMS-201ENST00000323224 WAPLQ7Z5K2 1190 aa27.74■■■□□ 2.03
TYMS-201ENST00000323224 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
TYMS-201ENST00000323224 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
TYMS-201ENST00000323224 KNDC1Q76NI1 1749 aa27.73■■■□□ 2.03
TYMS-201ENST00000323224 TECPR2O15040 1411 aa27.72■■■□□ 2.03
TYMS-201ENST00000323224 PLEKHH1Q9ULM0 1364 aa27.72■■■□□ 2.03
TYMS-201ENST00000323224 NRXN1Q9ULB1 1477 aa27.72■■■□□ 2.03
TYMS-201ENST00000323224 NUTM2BA6NNL0 878 aaPredicted RBP27.7■■■□□ 2.03
TYMS-201ENST00000323224 NUTM2EB1AL46 878 aaPredicted RBP27.7■■■□□ 2.03
TYMS-201ENST00000323224 NUTM2AQ8IVF1 878 aaPredicted RBP27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms