RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
EEA1-201ENST00000322349 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
EEA1-201ENST00000322349 DIAPH3Q9NSV4 1193 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 IFIT2P09913 472 aaKnown RBP12.51□□□□□ -0.41
EEA1-201ENST00000322349 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
EEA1-201ENST00000322349 ZFYVE27Q5T4F4 411 aa12.5□□□□□ -0.41
EEA1-201ENST00000322349 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
EEA1-201ENST00000322349 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
EEA1-201ENST00000322349 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
EEA1-201ENST00000322349 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
EEA1-201ENST00000322349 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
EEA1-201ENST00000322349 RALBP1Q15311 655 aa12.49□□□□□ -0.41
EEA1-201ENST00000322349 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
EEA1-201ENST00000322349 TRDNQ13061 729 aa12.49□□□□□ -0.41
EEA1-201ENST00000322349 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
EEA1-201ENST00000322349 ST18O60284 1047 aa12.48□□□□□ -0.41
EEA1-201ENST00000322349 WASHC4Q2M389 1173 aa12.48□□□□□ -0.41
EEA1-201ENST00000322349 ODF2Q5BJF6 829 aa12.48□□□□□ -0.41
EEA1-201ENST00000322349 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
EEA1-201ENST00000322349 CPLX1O14810 134 aa12.48□□□□□ -0.41
EEA1-201ENST00000322349 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
EEA1-201ENST00000322349 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
EEA1-201ENST00000322349 CT47A1Q5JQC4 288 aaPredicted RBP12.48□□□□□ -0.41
EEA1-201ENST00000322349 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
EEA1-201ENST00000322349 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
EEA1-201ENST00000322349 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
EEA1-201ENST00000322349 HMOX1P09601 288 aa12.47□□□□□ -0.41
EEA1-201ENST00000322349 G3BP1Q13283 466 aaKnown RBP eCLIP12.47□□□□□ -0.41
EEA1-201ENST00000322349 PANK3Q9H999 370 aa12.47□□□□□ -0.41
EEA1-201ENST00000322349 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
EEA1-201ENST00000322349 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
EEA1-201ENST00000322349 CPLX2Q6PUV4 134 aaKnown RBP12.46□□□□□ -0.41
EEA1-201ENST00000322349 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.42
EEA1-201ENST00000322349 NAP1L1P55209 391 aaKnown RBP12.46□□□□□ -0.42
EEA1-201ENST00000322349 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.42
EEA1-201ENST00000322349 TPM1P09493 284 aa12.45□□□□□ -0.42
EEA1-201ENST00000322349 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
EEA1-201ENST00000322349 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
EEA1-201ENST00000322349 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
EEA1-201ENST00000322349 PTMSP20962 102 aa12.45□□□□□ -0.42
EEA1-201ENST00000322349 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
EEA1-201ENST00000322349 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
EEA1-201ENST00000322349 PPM1FP49593 454 aaPredicted RBP12.44□□□□□ -0.42
EEA1-201ENST00000322349 BECN2A8MW95 431 aa12.43□□□□□ -0.42
EEA1-201ENST00000322349 NACADO15069 1562 aa12.43□□□□□ -0.42
EEA1-201ENST00000322349 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
EEA1-201ENST00000322349 TNNT3P45378 269 aaPredicted RBP12.42□□□□□ -0.42
EEA1-201ENST00000322349 EPS15P42566 896 aa12.42□□□□□ -0.42
EEA1-201ENST00000322349 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
EEA1-201ENST00000322349 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
EEA1-201ENST00000322349 ABTB2Q8N961 1025 aa12.42□□□□□ -0.42
EEA1-201ENST00000322349 SMARCA2P51531 1590 aa12.42□□□□□ -0.42
EEA1-201ENST00000322349 BICDL1Q6ZP65 573 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 ZNF592Q92610 1267 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
EEA1-201ENST00000322349 RIPK4P57078 832 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 NLRP6P59044 892 aa12.41□□□□□ -0.42
EEA1-201ENST00000322349 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
EEA1-201ENST00000322349 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
EEA1-201ENST00000322349 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
EEA1-201ENST00000322349 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
EEA1-201ENST00000322349 HSP90AB2PQ58FF8 381 aa12.39□□□□□ -0.43
EEA1-201ENST00000322349 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
EEA1-201ENST00000322349 PHF14O94880 888 aa12.39□□□□□ -0.43
EEA1-201ENST00000322349 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
EEA1-201ENST00000322349 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
EEA1-201ENST00000322349 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
EEA1-201ENST00000322349 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
EEA1-201ENST00000322349 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
EEA1-201ENST00000322349 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
EEA1-201ENST00000322349 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
EEA1-201ENST00000322349 CCDC70Q6NSX1 233 aa12.37□□□□□ -0.43
EEA1-201ENST00000322349 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
EEA1-201ENST00000322349 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
EEA1-201ENST00000322349 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
EEA1-201ENST00000322349 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
EEA1-201ENST00000322349 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 ABCC8Q09428 1581 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
EEA1-201ENST00000322349 SKIDA1Q1XH10 827 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
EEA1-201ENST00000322349 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
EEA1-201ENST00000322349 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
EEA1-201ENST00000322349 PTPRGP23470 1445 aa12.36□□□□□ -0.43
EEA1-201ENST00000322349 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
EEA1-201ENST00000322349 GRM1Q13255 1194 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms