RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SLAIN2Q9P270 581 aa30.75■■■□□ 2.51
SSNA1-201ENST00000322310 SETD1AO15047 1707 aaKnown RBP30.74■■■□□ 2.51
SSNA1-201ENST00000322310 PHLPP1O60346 1717 aa30.73■■■□□ 2.51
SSNA1-201ENST00000322310 SLC52A1Q9NWF4 448 aa30.73■■■□□ 2.51
SSNA1-201ENST00000322310 JCADQ9P266 1359 aa30.7■■■□□ 2.51
SSNA1-201ENST00000322310 APLP2Q06481 763 aa30.69■■■□□ 2.5
SSNA1-201ENST00000322310 ZFYVE9O95405 1425 aa30.69■■■□□ 2.5
SSNA1-201ENST00000322310 PLEKHG1Q9ULL1 1385 aa30.66■■■□□ 2.5
SSNA1-201ENST00000322310 RIMS2Q9UQ26 1411 aa30.64■■■□□ 2.5
SSNA1-201ENST00000322310 CHD2O14647 1828 aaKnown RBP30.64■■■□□ 2.5
SSNA1-201ENST00000322310 MYO5BQ9ULV0 1848 aa30.64■■■□□ 2.5
SSNA1-201ENST00000322310 COL16A1Q07092 1604 aaPredicted RBP30.64■■■□□ 2.5
SSNA1-201ENST00000322310 RPRD2Q5VT52 1461 aaKnown RBP30.63■■■□□ 2.49
SSNA1-201ENST00000322310 PPP1R15AO75807 674 aaPredicted RBP30.63■■■□□ 2.49
SSNA1-201ENST00000322310 ADGRL2O95490 1459 aa30.63■■■□□ 2.49
SSNA1-201ENST00000322310 GCC2Q8IWJ2 1684 aa30.62■■■□□ 2.49
SSNA1-201ENST00000322310 LRP6O75581 1613 aa30.6■■■□□ 2.49
SSNA1-201ENST00000322310 TMEM131LA2VDJ0 1609 aa30.59■■■□□ 2.49
SSNA1-201ENST00000322310 ANKRD50Q9ULJ7 1429 aa30.58■■■□□ 2.49
SSNA1-201ENST00000322310 C14orf37Q86TY3 774 aa30.56■■■□□ 2.48
SSNA1-201ENST00000322310 TBX22Q9Y458 520 aa30.56■■■□□ 2.48
SSNA1-201ENST00000322310 HDGFP51858 240 aaKnown RBP30.55■■■□□ 2.48
SSNA1-201ENST00000322310 NUTM2DQ5VT03 806 aaPredicted RBP30.54■■■□□ 2.48
SSNA1-201ENST00000322310 CHGAP10645 457 aaKnown RBP30.53■■■□□ 2.48
SSNA1-201ENST00000322310 FAM50AQ14320 339 aaKnown RBP30.53■■■□□ 2.48
SSNA1-201ENST00000322310 NCOA3Q9Y6Q9 1424 aa30.53■■■□□ 2.48
SSNA1-201ENST00000322310 SPATA31A6Q5VVP1 1343 aa30.52■■■□□ 2.48
SSNA1-201ENST00000322310 MEX3CQ5U5Q3 659 aaKnown RBP30.52■■■□□ 2.48
SSNA1-201ENST00000322310 ADAMTS13Q76LX8 1427 aa30.52■■■□□ 2.48
SSNA1-201ENST00000322310 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.5■■■□□ 2.47
SSNA1-201ENST00000322310 TRIM52Q96A61 297 aa30.49■■■□□ 2.47
SSNA1-201ENST00000322310 AHDC1Q5TGY3 1603 aaPredicted RBP30.48■■■□□ 2.47
SSNA1-201ENST00000322310 CADPS2Q86UW7 1296 aa30.48■■■□□ 2.47
SSNA1-201ENST00000322310 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.48■■■□□ 2.47
SSNA1-201ENST00000322310 ZNF772Q68DY9 489 aaPredicted RBP30.47■■■□□ 2.47
SSNA1-201ENST00000322310 C19orf44Q9H6X5 657 aa30.47■■■□□ 2.47
SSNA1-201ENST00000322310 ATF3P18847 181 aa30.46■■■□□ 2.47
SSNA1-201ENST00000322310 UPF1Q92900 1129 aaKnown RBP eCLIP30.46■■■□□ 2.472e-6■■□□□ 13.7
SSNA1-201ENST00000322310 SHPRHQ149N8 1683 aa30.45■■■□□ 2.46
SSNA1-201ENST00000322310 DIP2AQ14689 1571 aa30.45■■■□□ 2.46
SSNA1-201ENST00000322310 UNC13BO14795 1591 aa30.43■■■□□ 2.46
SSNA1-201ENST00000322310 E9PCH4 1651 aa30.42■■■□□ 2.46
SSNA1-201ENST00000322310 PIK3R4Q99570 1358 aa30.41■■■□□ 2.46
SSNA1-201ENST00000322310 BRINP3Q76B58 766 aa30.4■■■□□ 2.46
SSNA1-201ENST00000322310 PTPRUQ92729 1446 aa30.39■■■□□ 2.46
SSNA1-201ENST00000322310 NUTM2BA6NNL0 878 aaPredicted RBP30.38■■■□□ 2.45
SSNA1-201ENST00000322310 NUTM2EB1AL46 878 aaPredicted RBP30.38■■■□□ 2.45
SSNA1-201ENST00000322310 NUTM2AQ8IVF1 878 aaPredicted RBP30.38■■■□□ 2.45
SSNA1-201ENST00000322310 AMOTL2Q9Y2J4 779 aa30.38■■■□□ 2.45
SSNA1-201ENST00000322310 TRPM2O94759 1503 aa30.37■■■□□ 2.45
SSNA1-201ENST00000322310 RXRBP28702 533 aa30.35■■■□□ 2.45
SSNA1-201ENST00000322310 IQGAP3Q86VI3 1631 aa30.32■■■□□ 2.44
SSNA1-201ENST00000322310 ASXL1Q8IXJ9 1541 aa30.31■■■□□ 2.44
SSNA1-201ENST00000322310 DCCP43146 1447 aa30.29■■■□□ 2.44
SSNA1-201ENST00000322310 AFF2P51816 1311 aa30.28■■■□□ 2.44
SSNA1-201ENST00000322310 XRN1Q8IZH2 1706 aaKnown RBP30.27■■■□□ 2.44
SSNA1-201ENST00000322310 CDK12Q9NYV4 1490 aaPredicted RBP30.26■■■□□ 2.44
SSNA1-201ENST00000322310 NRXN3Q9Y4C0 1643 aa30.26■■■□□ 2.44
SSNA1-201ENST00000322310 MST1RQ04912 1400 aa30.26■■■□□ 2.43
SSNA1-201ENST00000322310 SETD5Q9C0A6 1442 aa30.25■■■□□ 2.43
SSNA1-201ENST00000322310 NUP155O75694 1391 aa30.25■■■□□ 2.43
SSNA1-201ENST00000322310 ROCK1Q13464 1354 aa30.23■■■□□ 2.43
SSNA1-201ENST00000322310 NHSL1Q5SYE7 1610 aa30.22■■■□□ 2.43
SSNA1-201ENST00000322310 SETBP1Q9Y6X0 1596 aa30.21■■■□□ 2.43
SSNA1-201ENST00000322310 DDX17Q92841 729 aaKnown RBP30.21■■■□□ 2.43
SSNA1-201ENST00000322310 METP08581 1390 aa30.19■■■□□ 2.42
SSNA1-201ENST00000322310 C8orf37Q96NL8 207 aa30.19■■■□□ 2.42
SSNA1-201ENST00000322310 LRRC59Q96AG4 307 aaKnown RBP30.18■■■□□ 2.42
SSNA1-201ENST00000322310 RGS12O14924 1447 aa30.18■■■□□ 2.42
SSNA1-201ENST00000322310 PNPLA6Q8IY17 1366 aa30.15■■■□□ 2.42
SSNA1-201ENST00000322310 ZNF326Q5BKZ1 582 aaKnown RBP30.15■■■□□ 2.42
SSNA1-201ENST00000322310 ADGRL3Q9HAR2 1447 aa30.14■■■□□ 2.42
SSNA1-201ENST00000322310 QTRT2Q9H974 415 aaKnown RBP30.14■■■□□ 2.42
SSNA1-201ENST00000322310 ITGAEP38570 1179 aa30.13■■■□□ 2.41
SSNA1-201ENST00000322310 SPHKAPQ2M3C7 1700 aa30.11■■■□□ 2.41
SSNA1-201ENST00000322310 NALCNQ8IZF0 1738 aa30.11■■■□□ 2.41
SSNA1-201ENST00000322310 RBM6P78332 1123 aaKnown RBP30.11■■■□□ 2.41
SSNA1-201ENST00000322310 ADAMTS2O95450 1211 aa30.07■■■□□ 2.4
SSNA1-201ENST00000322310 NEXMIFQ5QGS0 1516 aa30.05■■■□□ 2.4
SSNA1-201ENST00000322310 NGLY1Q96IV0 654 aa30.04■■■□□ 2.4
SSNA1-201ENST00000322310 SRCAPQ6ZRS2 3230 aa30.03■■■□□ 2.4
SSNA1-201ENST00000322310 C1orf167Q5SNV9 1468 aa30.03■■■□□ 2.4
SSNA1-201ENST00000322310 CLTCL1P53675 1640 aa30.01■■■□□ 2.39
SSNA1-201ENST00000322310 ORAI2Q96SN7 254 aa29.97■■■□□ 2.39
SSNA1-201ENST00000322310 LAMC1P11047 1609 aa29.96■■■□□ 2.39
SSNA1-201ENST00000322310 SOS2Q07890 1332 aaPredicted RBP29.95■■■□□ 2.38
SSNA1-201ENST00000322310 ROBO2Q9HCK4 1378 aa29.94■■■□□ 2.38
SSNA1-201ENST00000322310 USP21Q9UK80 565 aa29.94■■■□□ 2.38
SSNA1-201ENST00000322310 PTCH1Q13635 1447 aa29.94■■■□□ 2.38
SSNA1-201ENST00000322310 ATAD2Q6PL18 1390 aa29.93■■■□□ 2.38
SSNA1-201ENST00000322310 PPARGC1BQ86YN6 1023 aaKnown RBP29.9■■■□□ 2.38
SSNA1-201ENST00000322310 TRPC5Q9UL62 973 aaPredicted RBP29.89■■■□□ 2.38
SSNA1-201ENST00000322310 KIF1BO60333 1816 aa29.87■■■□□ 2.37
SSNA1-201ENST00000322310 FNBP4Q8N3X1 1017 aaPredicted RBP29.87■■■□□ 2.37
SSNA1-201ENST00000322310 ATRNO75882 1429 aa29.85■■■□□ 2.37
SSNA1-201ENST00000322310 COL22A1Q8NFW1 1626 aaPredicted RBP29.83■■■□□ 2.37
SSNA1-201ENST00000322310 VGFO15240 615 aaPredicted RBP29.83■■■□□ 2.37
SSNA1-201ENST00000322310 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
SSNA1-201ENST00000322310 EP400Q96L91 3159 aa29.82■■■□□ 2.36
SSNA1-201ENST00000322310 MYOM2P54296 1465 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms