RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 PDE3AQ14432 1141 aa17.18■□□□□ 0.34
ZNF541-202ENST00000314121 NOL8Q76FK4 1167 aaKnown RBP17.18■□□□□ 0.34
ZNF541-202ENST00000314121 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
ZNF541-202ENST00000314121 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
ZNF541-202ENST00000314121 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
ZNF541-202ENST00000314121 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
ZNF541-202ENST00000314121 REC8O95072 547 aa17.17■□□□□ 0.34
ZNF541-202ENST00000314121 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
ZNF541-202ENST00000314121 COG3Q96JB2 828 aa17.15■□□□□ 0.34
ZNF541-202ENST00000314121 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
ZNF541-202ENST00000314121 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
ZNF541-202ENST00000314121 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
ZNF541-202ENST00000314121 AMPHP49418 695 aa17.14■□□□□ 0.34
ZNF541-202ENST00000314121 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-202ENST00000314121 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-202ENST00000314121 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
ZNF541-202ENST00000314121 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
ZNF541-202ENST00000314121 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
ZNF541-202ENST00000314121 MSH5O43196 834 aa17.13■□□□□ 0.33
ZNF541-202ENST00000314121 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
ZNF541-202ENST00000314121 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
ZNF541-202ENST00000314121 MTHFSP49914 203 aa17.13■□□□□ 0.33
ZNF541-202ENST00000314121 ARID3AQ99856 593 aa17.12■□□□□ 0.33
ZNF541-202ENST00000314121 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
ZNF541-202ENST00000314121 DAPK1P53355 1430 aa17.12■□□□□ 0.33
ZNF541-202ENST00000314121 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
ZNF541-202ENST00000314121 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
ZNF541-202ENST00000314121 ROCK1Q13464 1354 aa17.12■□□□□ 0.33
ZNF541-202ENST00000314121 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
ZNF541-202ENST00000314121 C9orf84Q5VXU9 1444 aa17.11■□□□□ 0.33
ZNF541-202ENST00000314121 NUCB2P80303 420 aa17.11■□□□□ 0.33
ZNF541-202ENST00000314121 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
ZNF541-202ENST00000314121 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
ZNF541-202ENST00000314121 GNAI1P63096 354 aa17.1■□□□□ 0.33
ZNF541-202ENST00000314121 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
ZNF541-202ENST00000314121 MRE11P49959 708 aa17.09■□□□□ 0.33
ZNF541-202ENST00000314121 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
ZNF541-202ENST00000314121 PDZRN3Q9UPQ7 1066 aa17.08■□□□□ 0.33
ZNF541-202ENST00000314121 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.32
ZNF541-202ENST00000314121 BCAR3O75815 825 aa17.08■□□□□ 0.32
ZNF541-202ENST00000314121 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
ZNF541-202ENST00000314121 NUTM2FA1L443 756 aa17.07■□□□□ 0.32
ZNF541-202ENST00000314121 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
ZNF541-202ENST00000314121 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
ZNF541-202ENST00000314121 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
ZNF541-202ENST00000314121 KIF3AQ9Y496 699 aa17.05■□□□□ 0.32
ZNF541-202ENST00000314121 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
ZNF541-202ENST00000314121 TRAK2O60296 914 aa17.05■□□□□ 0.32
ZNF541-202ENST00000314121 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
ZNF541-202ENST00000314121 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 PCF11O94913 1555 aaKnown RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 TPM4P67936 248 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 FAM43AQ8N2R8 423 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
ZNF541-202ENST00000314121 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
ZNF541-202ENST00000314121 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
ZNF541-202ENST00000314121 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
ZNF541-202ENST00000314121 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
ZNF541-202ENST00000314121 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
ZNF541-202ENST00000314121 CDC45O75419 566 aa17.03■□□□□ 0.32
ZNF541-202ENST00000314121 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
ZNF541-202ENST00000314121 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 NESP48681 1621 aa17.01■□□□□ 0.31
ZNF541-202ENST00000314121 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
ZNF541-202ENST00000314121 HMOX1P09601 288 aa17■□□□□ 0.31
ZNF541-202ENST00000314121 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
ZNF541-202ENST00000314121 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
ZNF541-202ENST00000314121 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
ZNF541-202ENST00000314121 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
ZNF541-202ENST00000314121 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
ZNF541-202ENST00000314121 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
ZNF541-202ENST00000314121 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
ZNF541-202ENST00000314121 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
ZNF541-202ENST00000314121 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
ZNF541-202ENST00000314121 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
ZNF541-202ENST00000314121 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
ZNF541-202ENST00000314121 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
ZNF541-202ENST00000314121 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
ZNF541-202ENST00000314121 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
ZNF541-202ENST00000314121 TEFQ10587 303 aa16.96■□□□□ 0.31
ZNF541-202ENST00000314121 SF3A1Q15459 793 aaKnown RBP16.96■□□□□ 0.31
ZNF541-202ENST00000314121 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
ZNF541-202ENST00000314121 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
ZNF541-202ENST00000314121 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.31
ZNF541-202ENST00000314121 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
ZNF541-202ENST00000314121 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
ZNF541-202ENST00000314121 H3BQV1 296 aa16.95■□□□□ 0.3
ZNF541-202ENST00000314121 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
ZNF541-202ENST00000314121 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms