RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 LTKP29376 864 aa14.24□□□□□ -0.13
CHRNA9-201ENST00000310169 BCANQ96GW7 911 aa14.24□□□□□ -0.13
CHRNA9-201ENST00000310169 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
CHRNA9-201ENST00000310169 SLIT1O75093 1534 aa14.23□□□□□ -0.13
CHRNA9-201ENST00000310169 SCAF11Q99590 1463 aaKnown RBP14.22□□□□□ -0.13
CHRNA9-201ENST00000310169 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
CHRNA9-201ENST00000310169 NUTM2DQ5VT03 806 aaPredicted RBP14.21□□□□□ -0.13
CHRNA9-201ENST00000310169 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHRNA9-201ENST00000310169 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
CHRNA9-201ENST00000310169 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.14
CHRNA9-201ENST00000310169 RIMS2Q9UQ26 1411 aa14.2□□□□□ -0.14
CHRNA9-201ENST00000310169 RGL3Q3MIN7 710 aa14.2□□□□□ -0.14
CHRNA9-201ENST00000310169 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
CHRNA9-201ENST00000310169 MED14O60244 1454 aa14.18□□□□□ -0.14
CHRNA9-201ENST00000310169 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
CHRNA9-201ENST00000310169 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
CHRNA9-201ENST00000310169 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
CHRNA9-201ENST00000310169 SLC26A8Q96RN1 970 aa14.16□□□□□ -0.14
CHRNA9-201ENST00000310169 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
CHRNA9-201ENST00000310169 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
CHRNA9-201ENST00000310169 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
CHRNA9-201ENST00000310169 PLEKHG1Q9ULL1 1385 aa14.14□□□□□ -0.15
CHRNA9-201ENST00000310169 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
CHRNA9-201ENST00000310169 NEXMIFQ5QGS0 1516 aa14.11□□□□□ -0.15
CHRNA9-201ENST00000310169 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
CHRNA9-201ENST00000310169 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
CHRNA9-201ENST00000310169 TBX22Q9Y458 520 aa14.09□□□□□ -0.15
CHRNA9-201ENST00000310169 NEUROD1Q13562 356 aa14.08□□□□□ -0.15
CHRNA9-201ENST00000310169 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.15
CHRNA9-201ENST00000310169 PPLO60437 1756 aa14.08□□□□□ -0.16
CHRNA9-201ENST00000310169 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
CHRNA9-201ENST00000310169 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
CHRNA9-201ENST00000310169 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
CHRNA9-201ENST00000310169 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
CHRNA9-201ENST00000310169 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
CHRNA9-201ENST00000310169 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
CHRNA9-201ENST00000310169 KCNA6P17658 529 aa14.06□□□□□ -0.16
CHRNA9-201ENST00000310169 LTBP4Q8N2S1 1624 aa14.05□□□□□ -0.16
CHRNA9-201ENST00000310169 ADAMTS13Q76LX8 1427 aa14.05□□□□□ -0.16
CHRNA9-201ENST00000310169 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
CHRNA9-201ENST00000310169 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
CHRNA9-201ENST00000310169 SETBP1Q9Y6X0 1596 aa14.04□□□□□ -0.16
CHRNA9-201ENST00000310169 IFT172Q9UG01 1749 aa14.03□□□□□ -0.16
CHRNA9-201ENST00000310169 CPS1P31327 1500 aa14.03□□□□□ -0.16
CHRNA9-201ENST00000310169 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.16
CHRNA9-201ENST00000310169 STAC3Q96MF2 364 aa14.02□□□□□ -0.16
CHRNA9-201ENST00000310169 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
CHRNA9-201ENST00000310169 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.17
CHRNA9-201ENST00000310169 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
CHRNA9-201ENST00000310169 PIK3R4Q99570 1358 aa14.02□□□□□ -0.17
CHRNA9-201ENST00000310169 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
CHRNA9-201ENST00000310169 METP08581 1390 aa14.01□□□□□ -0.17
CHRNA9-201ENST00000310169 ALKQ9UM73 1620 aa14□□□□□ -0.17
CHRNA9-201ENST00000310169 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
CHRNA9-201ENST00000310169 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
CHRNA9-201ENST00000310169 MYOM2P54296 1465 aa13.99□□□□□ -0.17
CHRNA9-201ENST00000310169 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
CHRNA9-201ENST00000310169 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
CHRNA9-201ENST00000310169 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
CHRNA9-201ENST00000310169 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
CHRNA9-201ENST00000310169 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
CHRNA9-201ENST00000310169 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
CHRNA9-201ENST00000310169 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
CHRNA9-201ENST00000310169 C14orf93Q9H972 538 aaKnown RBP13.97□□□□□ -0.17
CHRNA9-201ENST00000310169 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.17
CHRNA9-201ENST00000310169 STK26Q9P289 416 aa13.96□□□□□ -0.17
CHRNA9-201ENST00000310169 PTPRUQ92729 1446 aa13.96□□□□□ -0.17
CHRNA9-201ENST00000310169 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
CHRNA9-201ENST00000310169 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
CHRNA9-201ENST00000310169 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.18
CHRNA9-201ENST00000310169 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
CHRNA9-201ENST00000310169 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
CHRNA9-201ENST00000310169 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
CHRNA9-201ENST00000310169 FBXO41Q8TF61 875 aa13.94□□□□□ -0.18
CHRNA9-201ENST00000310169 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
CHRNA9-201ENST00000310169 TOM1O60784 492 aa13.94□□□□□ -0.18
CHRNA9-201ENST00000310169 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
CHRNA9-201ENST00000310169 LAMC1P11047 1609 aa13.93□□□□□ -0.18
CHRNA9-201ENST00000310169 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
CHRNA9-201ENST00000310169 MSH6P52701 1360 aa13.91□□□□□ -0.18
CHRNA9-201ENST00000310169 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
CHRNA9-201ENST00000310169 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
CHRNA9-201ENST00000310169 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.18
CHRNA9-201ENST00000310169 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.19
CHRNA9-201ENST00000310169 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 ATF3P18847 181 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
CHRNA9-201ENST00000310169 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
CHRNA9-201ENST00000310169 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
CHRNA9-201ENST00000310169 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
CHRNA9-201ENST00000310169 PTCH1Q13635 1447 aa13.88□□□□□ -0.19
CHRNA9-201ENST00000310169 ASXL1Q8IXJ9 1541 aa13.87□□□□□ -0.19
CHRNA9-201ENST00000310169 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
CHRNA9-201ENST00000310169 POGKQ9P215 609 aa13.87□□□□□ -0.19
CHRNA9-201ENST00000310169 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
CHRNA9-201ENST00000310169 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHRNA9-201ENST00000310169 KIAA1210Q9ULL0 1709 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms