RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 ST18O60284 1047 aa13.33□□□□□ -0.28
GGA2-201ENST00000309859 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
GGA2-201ENST00000309859 GOLGA6L6A8MZA4 724 aa13.32□□□□□ -0.28
GGA2-201ENST00000309859 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
GGA2-201ENST00000309859 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
GGA2-201ENST00000309859 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
GGA2-201ENST00000309859 CCDC66A2RUB6 948 aa13.31□□□□□ -0.28
GGA2-201ENST00000309859 ZBTB9Q96C00 473 aa13.31□□□□□ -0.28
GGA2-201ENST00000309859 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
GGA2-201ENST00000309859 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
GGA2-201ENST00000309859 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
GGA2-201ENST00000309859 TSPY26PQ9H489 355 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 PHF14O94880 888 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 C17orf53Q8N3J3 647 aaPredicted RBP13.3□□□□□ -0.28
GGA2-201ENST00000309859 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 NUP155O75694 1391 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
GGA2-201ENST00000309859 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
GGA2-201ENST00000309859 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
GGA2-201ENST00000309859 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
GGA2-201ENST00000309859 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
GGA2-201ENST00000309859 GAS2L3Q86XJ1 694 aa13.29□□□□□ -0.28
GGA2-201ENST00000309859 DZIP1LQ8IYY4 767 aaKnown RBP13.29□□□□□ -0.28
GGA2-201ENST00000309859 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
GGA2-201ENST00000309859 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
GGA2-201ENST00000309859 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
GGA2-201ENST00000309859 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
GGA2-201ENST00000309859 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
GGA2-201ENST00000309859 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
GGA2-201ENST00000309859 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.28
GGA2-201ENST00000309859 NUCB2P80303 420 aa13.27□□□□□ -0.28
GGA2-201ENST00000309859 GNL2Q13823 731 aaKnown RBP13.27□□□□□ -0.28
GGA2-201ENST00000309859 NCOA1Q15788 1441 aa13.27□□□□□ -0.28
GGA2-201ENST00000309859 KIF16BQ96L93 1317 aa13.27□□□□□ -0.29
GGA2-201ENST00000309859 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.29
GGA2-201ENST00000309859 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
GGA2-201ENST00000309859 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
GGA2-201ENST00000309859 ZBTB22O15209 634 aa13.26□□□□□ -0.29
GGA2-201ENST00000309859 MCCP23508 829 aa13.26□□□□□ -0.29
GGA2-201ENST00000309859 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
GGA2-201ENST00000309859 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
GGA2-201ENST00000309859 GDPD2Q9HCC8 539 aa13.26□□□□□ -0.29
GGA2-201ENST00000309859 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
GGA2-201ENST00000309859 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.299e-7■■■■□ 20.1
GGA2-201ENST00000309859 TNNQ9UQP3 1299 aa13.25□□□□□ -0.29
GGA2-201ENST00000309859 TTC12Q9H892 705 aaPredicted RBP13.25□□□□□ -0.29
GGA2-201ENST00000309859 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
GGA2-201ENST00000309859 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
GGA2-201ENST00000309859 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 GPATCH11Q8N954 259 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
GGA2-201ENST00000309859 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 PPP2R1AP30153 589 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
GGA2-201ENST00000309859 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
GGA2-201ENST00000309859 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
GGA2-201ENST00000309859 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
GGA2-201ENST00000309859 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.294e-7■■□□□ 14
GGA2-201ENST00000309859 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
GGA2-201ENST00000309859 TNNT1P13805 278 aa13.22□□□□□ -0.29
GGA2-201ENST00000309859 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
GGA2-201ENST00000309859 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.298e-10■■■■■ 39.1
GGA2-201ENST00000309859 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
GGA2-201ENST00000309859 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
GGA2-201ENST00000309859 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.29
GGA2-201ENST00000309859 FIBPO43427 364 aa13.21□□□□□ -0.29
GGA2-201ENST00000309859 RBSNQ9H1K0 784 aa13.21□□□□□ -0.29
GGA2-201ENST00000309859 SLFN5Q08AF3 891 aa13.21□□□□□ -0.3
GGA2-201ENST00000309859 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
GGA2-201ENST00000309859 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
GGA2-201ENST00000309859 RIPK4P57078 832 aa13.2□□□□□ -0.3
GGA2-201ENST00000309859 TEX35Q5T0J7 233 aa13.2□□□□□ -0.3
GGA2-201ENST00000309859 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 NRDCO43847 1150 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 NEK4P51957 841 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
GGA2-201ENST00000309859 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
GGA2-201ENST00000309859 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
GGA2-201ENST00000309859 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
GGA2-201ENST00000309859 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
GGA2-201ENST00000309859 TRIM5Q9C035 493 aa13.19□□□□□ -0.3
GGA2-201ENST00000309859 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
GGA2-201ENST00000309859 ERICH3Q5RHP9 1530 aa13.18□□□□□ -0.3
GGA2-201ENST00000309859 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
GGA2-201ENST00000309859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGA2-201ENST00000309859 DMTNQ08495 405 aa13.17□□□□□ -0.3
GGA2-201ENST00000309859 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGA2-201ENST00000309859 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms