RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
SCUBE2-201ENST00000309263 SEC24BO95487 1268 aa18.53■□□□□ 0.56
SCUBE2-201ENST00000309263 IGHDP01880 384 aa18.53■□□□□ 0.56
SCUBE2-201ENST00000309263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCUBE2-201ENST00000309263 BECN1Q14457 450 aa18.51■□□□□ 0.55
SCUBE2-201ENST00000309263 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
SCUBE2-201ENST00000309263 ITSN2Q9NZM3 1697 aa18.51■□□□□ 0.55
SCUBE2-201ENST00000309263 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
SCUBE2-201ENST00000309263 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
SCUBE2-201ENST00000309263 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
SCUBE2-201ENST00000309263 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
SCUBE2-201ENST00000309263 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
SCUBE2-201ENST00000309263 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
SCUBE2-201ENST00000309263 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
SCUBE2-201ENST00000309263 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
SCUBE2-201ENST00000309263 PLCH2O75038 1416 aa18.47■□□□□ 0.55
SCUBE2-201ENST00000309263 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
SCUBE2-201ENST00000309263 CENPJQ9HC77 1338 aaPredicted RBP18.44■□□□□ 0.54
SCUBE2-201ENST00000309263 CD109Q6YHK3 1445 aa18.44■□□□□ 0.54
SCUBE2-201ENST00000309263 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-201ENST00000309263 MYO5CQ9NQX4 1742 aa18.42■□□□□ 0.54
SCUBE2-201ENST00000309263 NUTM2DQ5VT03 806 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-201ENST00000309263 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
SCUBE2-201ENST00000309263 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
SCUBE2-201ENST00000309263 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
SCUBE2-201ENST00000309263 NAP1L5Q96NT1 182 aaPredicted RBP18.41■□□□□ 0.54
SCUBE2-201ENST00000309263 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
SCUBE2-201ENST00000309263 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
SCUBE2-201ENST00000309263 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
SCUBE2-201ENST00000309263 E9PSI1 815 aa18.4■□□□□ 0.54
SCUBE2-201ENST00000309263 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
SCUBE2-201ENST00000309263 RSPH4AQ5TD94 716 aa18.4■□□□□ 0.54
SCUBE2-201ENST00000309263 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
SCUBE2-201ENST00000309263 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.54
SCUBE2-201ENST00000309263 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
SCUBE2-201ENST00000309263 FANCAO15360 1455 aa18.39■□□□□ 0.53
SCUBE2-201ENST00000309263 COL17A1Q9UMD9 1497 aaPredicted RBP18.38■□□□□ 0.53
SCUBE2-201ENST00000309263 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
SCUBE2-201ENST00000309263 ABCA9Q8IUA7 1624 aa18.38■□□□□ 0.53
SCUBE2-201ENST00000309263 PLEKHH2Q8IVE3 1493 aa18.37■□□□□ 0.53
SCUBE2-201ENST00000309263 A2MP01023 1474 aa18.36■□□□□ 0.53
SCUBE2-201ENST00000309263 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
SCUBE2-201ENST00000309263 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
SCUBE2-201ENST00000309263 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
SCUBE2-201ENST00000309263 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
SCUBE2-201ENST00000309263 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
SCUBE2-201ENST00000309263 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
SCUBE2-201ENST00000309263 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
SCUBE2-201ENST00000309263 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
SCUBE2-201ENST00000309263 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
SCUBE2-201ENST00000309263 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
SCUBE2-201ENST00000309263 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
SCUBE2-201ENST00000309263 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
SCUBE2-201ENST00000309263 RRAGDQ9NQL2 400 aaPredicted RBP18.33■□□□□ 0.53
SCUBE2-201ENST00000309263 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.53
SCUBE2-201ENST00000309263 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.52
SCUBE2-201ENST00000309263 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.52
SCUBE2-201ENST00000309263 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.52
SCUBE2-201ENST00000309263 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
SCUBE2-201ENST00000309263 PANK2Q9BZ23 570 aa18.33■□□□□ 0.52
SCUBE2-201ENST00000309263 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 PCDHB15Q9Y5E8 787 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 USP19O94966 1318 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 WWC1Q8IX03 1113 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 ADGRL1O94910 1474 aa18.32■□□□□ 0.52
SCUBE2-201ENST00000309263 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
SCUBE2-201ENST00000309263 RLBP1P12271 317 aa18.31■□□□□ 0.52
SCUBE2-201ENST00000309263 ARAP3Q8WWN8 1544 aa18.31■□□□□ 0.52
SCUBE2-201ENST00000309263 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
SCUBE2-201ENST00000309263 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
SCUBE2-201ENST00000309263 KDM5DQ9BY66 1539 aa18.3■□□□□ 0.52
SCUBE2-201ENST00000309263 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
SCUBE2-201ENST00000309263 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
SCUBE2-201ENST00000309263 UBE2Q2Q8WVN8 375 aa18.27■□□□□ 0.52
SCUBE2-201ENST00000309263 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.51
SCUBE2-201ENST00000309263 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 TRAK1Q9UPV9 953 aa18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 EIF3AQ14152 1382 aaKnown RBP18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 GPRASP1Q5JY77 1395 aa18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 ABCC1P33527 1531 aa18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCUBE2-201ENST00000309263 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
SCUBE2-201ENST00000309263 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCUBE2-201ENST00000309263 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
SCUBE2-201ENST00000309263 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
SCUBE2-201ENST00000309263 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
SCUBE2-201ENST00000309263 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
SCUBE2-201ENST00000309263 GLI2P10070 1586 aa18.24■□□□□ 0.51
SCUBE2-201ENST00000309263 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms