RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PLEKHG1Q9ULL1 1385 aa30.03■■■□□ 2.4
PDZRN3-202ENST00000308537 SLC26A8Q96RN1 970 aa30.01■■■□□ 2.39
PDZRN3-202ENST00000308537 TRPM2O94759 1503 aa30■■■□□ 2.39
PDZRN3-202ENST00000308537 CLTCL1P53675 1640 aa30■■■□□ 2.39
PDZRN3-202ENST00000308537 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
PDZRN3-202ENST00000308537 CHD2O14647 1828 aaKnown RBP29.96■■■□□ 2.39
PDZRN3-202ENST00000308537 CHGAP10645 457 aaKnown RBP29.94■■■□□ 2.38
PDZRN3-202ENST00000308537 KCNA6P17658 529 aa29.94■■■□□ 2.38
PDZRN3-202ENST00000308537 TOM1O60784 492 aa29.93■■■□□ 2.38
PDZRN3-202ENST00000308537 NRXN3Q9Y4C0 1643 aa29.91■■■□□ 2.38
PDZRN3-202ENST00000308537 NKTRP30414 1462 aaKnown RBP29.91■■■□□ 2.38
PDZRN3-202ENST00000308537 NUTM2DQ5VT03 806 aaPredicted RBP29.89■■■□□ 2.38
PDZRN3-202ENST00000308537 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.89■■■□□ 2.38
PDZRN3-202ENST00000308537 HDGFP51858 240 aaKnown RBP29.88■■■□□ 2.37
PDZRN3-202ENST00000308537 SENP3Q9H4L4 574 aaPredicted RBP29.88■■■□□ 2.37
PDZRN3-202ENST00000308537 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
PDZRN3-202ENST00000308537 TMEM94Q12767 1356 aa29.88■■■□□ 2.37
PDZRN3-202ENST00000308537 TBX22Q9Y458 520 aa29.87■■■□□ 2.37
PDZRN3-202ENST00000308537 NEXMIFQ5QGS0 1516 aa29.86■■■□□ 2.37
PDZRN3-202ENST00000308537 PPP1R15AO75807 674 aaPredicted RBP29.86■■■□□ 2.37
PDZRN3-202ENST00000308537 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
PDZRN3-202ENST00000308537 KIF1BO60333 1816 aa29.85■■■□□ 2.37
PDZRN3-202ENST00000308537 TRIM52Q96A61 297 aa29.85■■■□□ 2.37
PDZRN3-202ENST00000308537 SETBP1Q9Y6X0 1596 aa29.84■■■□□ 2.37
PDZRN3-202ENST00000308537 HSPA1LP34931 641 aa29.83■■■□□ 2.37
PDZRN3-202ENST00000308537 SLC4A1APQ9BWU0 796 aaKnown RBP29.82■■■□□ 2.36
PDZRN3-202ENST00000308537 BCANQ96GW7 911 aa29.8■■■□□ 2.36
PDZRN3-202ENST00000308537 RBM33Q96EV2 1170 aaKnown RBP29.79■■■□□ 2.36
PDZRN3-202ENST00000308537 PTPRUQ92729 1446 aa29.79■■■□□ 2.36
PDZRN3-202ENST00000308537 PIK3R4Q99570 1358 aa29.78■■■□□ 2.36
PDZRN3-202ENST00000308537 SCAF1Q9H7N4 1312 aaKnown RBP29.78■■■□□ 2.36
PDZRN3-202ENST00000308537 PROSER2Q86WR7 435 aaPredicted RBP29.77■■■□□ 2.36
PDZRN3-202ENST00000308537 XRN1Q8IZH2 1706 aaKnown RBP29.74■■■□□ 2.35
PDZRN3-202ENST00000308537 FOXD1Q16676 465 aa29.74■■■□□ 2.35
PDZRN3-202ENST00000308537 SETD5Q9C0A6 1442 aa29.73■■■□□ 2.35
PDZRN3-202ENST00000308537 SETD1AO15047 1707 aaKnown RBP29.71■■■□□ 2.35
PDZRN3-202ENST00000308537 ZNF326Q5BKZ1 582 aaKnown RBP29.71■■■□□ 2.35
PDZRN3-202ENST00000308537 MPHOSPH9Q99550 1183 aa29.71■■■□□ 2.35
PDZRN3-202ENST00000308537 PPLO60437 1756 aa29.69■■■□□ 2.34
PDZRN3-202ENST00000308537 FAM135BQ49AJ0 1406 aa29.69■■■□□ 2.34
PDZRN3-202ENST00000308537 NCOA3Q9Y6Q9 1424 aa29.68■■■□□ 2.34
PDZRN3-202ENST00000308537 METP08581 1390 aa29.67■■■□□ 2.34
PDZRN3-202ENST00000308537 DISP3Q9P2K9 1392 aa29.67■■■□□ 2.34
PDZRN3-202ENST00000308537 SPATA31E1Q6ZUB1 1445 aa29.65■■■□□ 2.34
PDZRN3-202ENST00000308537 ROBO1Q9Y6N7 1651 aa29.65■■■□□ 2.34
PDZRN3-202ENST00000308537 RAB3GAP2Q9H2M9 1393 aa29.64■■■□□ 2.34
PDZRN3-202ENST00000308537 AMOTL2Q9Y2J4 779 aa29.64■■■□□ 2.34
PDZRN3-202ENST00000308537 MSH6P52701 1360 aa29.63■■■□□ 2.33
PDZRN3-202ENST00000308537 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
PDZRN3-202ENST00000308537 IFT172Q9UG01 1749 aa29.61■■■□□ 2.33
PDZRN3-202ENST00000308537 MED1Q15648 1581 aaPredicted RBP29.6■■■□□ 2.33
PDZRN3-202ENST00000308537 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
PDZRN3-202ENST00000308537 CCDC144AA2RUR9 1427 aa29.6■■■□□ 2.33
PDZRN3-202ENST00000308537 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
PDZRN3-202ENST00000308537 ACIN1Q9UKV3 1341 aaKnown RBP29.56■■■□□ 2.32
PDZRN3-202ENST00000308537 VGFO15240 615 aaPredicted RBP29.55■■■□□ 2.32
PDZRN3-202ENST00000308537 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
PDZRN3-202ENST00000308537 SLAIN2Q9P270 581 aa29.53■■■□□ 2.32
PDZRN3-202ENST00000308537 C19orf44Q9H6X5 657 aa29.51■■■□□ 2.31
PDZRN3-202ENST00000308537 NALCNQ8IZF0 1738 aa29.49■■■□□ 2.31
PDZRN3-202ENST00000308537 ADGRF5Q8IZF2 1346 aa29.48■■■□□ 2.31
PDZRN3-202ENST00000308537 DCCP43146 1447 aa29.48■■■□□ 2.31
PDZRN3-202ENST00000308537 PTCH1Q13635 1447 aa29.47■■■□□ 2.31
PDZRN3-202ENST00000308537 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.3
PDZRN3-202ENST00000308537 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.3
PDZRN3-202ENST00000308537 ROBO2Q9HCK4 1378 aa29.44■■■□□ 2.3
PDZRN3-202ENST00000308537 HRCP23327 699 aa29.44■■■□□ 2.3
PDZRN3-202ENST00000308537 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
PDZRN3-202ENST00000308537 CADPS2Q86UW7 1296 aa29.44■■■□□ 2.3
PDZRN3-202ENST00000308537 COL16A1Q07092 1604 aaPredicted RBP29.44■■■□□ 2.3
PDZRN3-202ENST00000308537 ANKRD30BQ9BXX2 1392 aa29.43■■■□□ 2.3
PDZRN3-202ENST00000308537 PHLPP1O60346 1717 aa29.42■■■□□ 2.3
PDZRN3-202ENST00000308537 C14orf37Q86TY3 774 aa29.42■■■□□ 2.3
PDZRN3-202ENST00000308537 PIK3C2GO75747 1445 aa29.42■■■□□ 2.3
PDZRN3-202ENST00000308537 MST1RQ04912 1400 aa29.42■■■□□ 2.3
PDZRN3-202ENST00000308537 AHDC1Q5TGY3 1603 aaPredicted RBP29.41■■■□□ 2.3
PDZRN3-202ENST00000308537 NRXN1Q9ULB1 1477 aa29.4■■■□□ 2.3
PDZRN3-202ENST00000308537 ATF3P18847 181 aa29.38■■■□□ 2.29
PDZRN3-202ENST00000308537 MYOM2P54296 1465 aa29.36■■■□□ 2.29
PDZRN3-202ENST00000308537 TECPR2O15040 1411 aa29.35■■■□□ 2.29
PDZRN3-202ENST00000308537 BRINP3Q76B58 766 aa29.34■■■□□ 2.29
PDZRN3-202ENST00000308537 KNDC1Q76NI1 1749 aa29.33■■■□□ 2.29
PDZRN3-202ENST00000308537 NHSL1Q5SYE7 1610 aa29.32■■■□□ 2.28
PDZRN3-202ENST00000308537 LRPPRCP42704 1394 aaKnown RBP29.29■■■□□ 2.28
PDZRN3-202ENST00000308537 RGS17Q9UGC6 210 aaPredicted RBP29.27■■■□□ 2.28
PDZRN3-202ENST00000308537 ABCC11Q96J66 1382 aa29.26■■■□□ 2.28
PDZRN3-202ENST00000308537 JCADQ9P266 1359 aa29.26■■■□□ 2.28
PDZRN3-202ENST00000308537 C1orf167Q5SNV9 1468 aa29.25■■■□□ 2.27
PDZRN3-202ENST00000308537 LAMC1P11047 1609 aa29.25■■■□□ 2.27
PDZRN3-202ENST00000308537 TMEM132EQ6IEE7 984 aa29.25■■■□□ 2.27
PDZRN3-202ENST00000308537 C14orf93Q9H972 538 aaKnown RBP29.25■■■□□ 2.27
PDZRN3-202ENST00000308537 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
PDZRN3-202ENST00000308537 CDC42BPGQ6DT37 1551 aa29.23■■■□□ 2.27
PDZRN3-202ENST00000308537 YTHDC2Q9H6S0 1430 aaKnown RBP29.23■■■□□ 2.27
PDZRN3-202ENST00000308537 SOCS7O14512 581 aa29.22■■■□□ 2.27
PDZRN3-202ENST00000308537 PLEKHH1Q9ULM0 1364 aa29.22■■■□□ 2.27
PDZRN3-202ENST00000308537 LRP6O75581 1613 aa29.2■■■□□ 2.26
PDZRN3-202ENST00000308537 CFAP70Q5T0N1 1121 aa29.19■■■□□ 2.26
PDZRN3-202ENST00000308537 ADGRB1O14514 1584 aa29.18■■■□□ 2.26
PDZRN3-202ENST00000308537 DHX57Q6P158 1386 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms