RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 TRIM52Q96A61 297 aa25.67■■□□□ 1.7
HMGCLL1-202ENST00000308161 LRRC7Q96NW7 1537 aa25.67■■□□□ 1.7
HMGCLL1-202ENST00000308161 TOM1O60784 492 aa25.66■■□□□ 1.7
HMGCLL1-202ENST00000308161 HFM1A2PYH4 1435 aa25.66■■□□□ 1.7
HMGCLL1-202ENST00000308161 NUTM2DQ5VT03 806 aaPredicted RBP25.65■■□□□ 1.7
HMGCLL1-202ENST00000308161 ZFYVE9O95405 1425 aa25.64■■□□□ 1.7
HMGCLL1-202ENST00000308161 HDGFP51858 240 aaKnown RBP25.63■■□□□ 1.69
HMGCLL1-202ENST00000308161 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
HMGCLL1-202ENST00000308161 PLEKHG1Q9ULL1 1385 aa25.59■■□□□ 1.69
HMGCLL1-202ENST00000308161 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.59■■□□□ 1.69
HMGCLL1-202ENST00000308161 KCNA6P17658 529 aa25.57■■□□□ 1.68
HMGCLL1-202ENST00000308161 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
HMGCLL1-202ENST00000308161 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
HMGCLL1-202ENST00000308161 RBM33Q96EV2 1170 aaKnown RBP25.54■■□□□ 1.68
HMGCLL1-202ENST00000308161 PROSER2Q86WR7 435 aaPredicted RBP25.53■■□□□ 1.68
HMGCLL1-202ENST00000308161 HSPA1LP34931 641 aa25.52■■□□□ 1.68
HMGCLL1-202ENST00000308161 TMEM94Q12767 1356 aa25.52■■□□□ 1.68
HMGCLL1-202ENST00000308161 ALKQ9UM73 1620 aa25.52■■□□□ 1.68
HMGCLL1-202ENST00000308161 CLTCL1P53675 1640 aa25.5■■□□□ 1.67
HMGCLL1-202ENST00000308161 TRPM2O94759 1503 aa25.5■■□□□ 1.67
HMGCLL1-202ENST00000308161 DISP3Q9P2K9 1392 aa25.5■■□□□ 1.67
HMGCLL1-202ENST00000308161 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
HMGCLL1-202ENST00000308161 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
HMGCLL1-202ENST00000308161 TBX22Q9Y458 520 aa25.47■■□□□ 1.67
HMGCLL1-202ENST00000308161 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
HMGCLL1-202ENST00000308161 ADAMTS13Q76LX8 1427 aa25.46■■□□□ 1.67
HMGCLL1-202ENST00000308161 FOXD1Q16676 465 aa25.45■■□□□ 1.66
HMGCLL1-202ENST00000308161 CHD2O14647 1828 aaKnown RBP25.42■■□□□ 1.66
HMGCLL1-202ENST00000308161 KIF1BO60333 1816 aa25.42■■□□□ 1.66
HMGCLL1-202ENST00000308161 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
HMGCLL1-202ENST00000308161 C14orf37Q86TY3 774 aa25.39■■□□□ 1.66
HMGCLL1-202ENST00000308161 MSH6P52701 1360 aa25.39■■□□□ 1.65
HMGCLL1-202ENST00000308161 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
HMGCLL1-202ENST00000308161 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
HMGCLL1-202ENST00000308161 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
HMGCLL1-202ENST00000308161 PIK3R4Q99570 1358 aa25.35■■□□□ 1.65
HMGCLL1-202ENST00000308161 AMOTL2Q9Y2J4 779 aa25.35■■□□□ 1.65
HMGCLL1-202ENST00000308161 NRXN3Q9Y4C0 1643 aa25.35■■□□□ 1.65
HMGCLL1-202ENST00000308161 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
HMGCLL1-202ENST00000308161 PTPRUQ92729 1446 aa25.32■■□□□ 1.64
HMGCLL1-202ENST00000308161 CCDC144AA2RUR9 1427 aa25.31■■□□□ 1.64
HMGCLL1-202ENST00000308161 METP08581 1390 aa25.29■■□□□ 1.64
HMGCLL1-202ENST00000308161 RAB3GAP2Q9H2M9 1393 aa25.29■■□□□ 1.64
HMGCLL1-202ENST00000308161 VGFO15240 615 aaPredicted RBP25.28■■□□□ 1.64
HMGCLL1-202ENST00000308161 FAM135BQ49AJ0 1406 aa25.28■■□□□ 1.64
HMGCLL1-202ENST00000308161 RGL3Q3MIN7 710 aa25.27■■□□□ 1.64
HMGCLL1-202ENST00000308161 ROBO1Q9Y6N7 1651 aa25.26■■□□□ 1.63
HMGCLL1-202ENST00000308161 ILDR2Q71H61 639 aa25.26■■□□□ 1.63
HMGCLL1-202ENST00000308161 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
HMGCLL1-202ENST00000308161 RPGRIP1LQ68CZ1 1315 aa25.25■■□□□ 1.63
HMGCLL1-202ENST00000308161 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
HMGCLL1-202ENST00000308161 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
HMGCLL1-202ENST00000308161 XRN1Q8IZH2 1706 aaKnown RBP25.23■■□□□ 1.63
HMGCLL1-202ENST00000308161 ACIN1Q9UKV3 1341 aaKnown RBP25.23■■□□□ 1.63
HMGCLL1-202ENST00000308161 ATF3P18847 181 aa25.23■■□□□ 1.63
HMGCLL1-202ENST00000308161 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
HMGCLL1-202ENST00000308161 PPLO60437 1756 aa25.21■■□□□ 1.63
HMGCLL1-202ENST00000308161 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.21■■□□□ 1.63
HMGCLL1-202ENST00000308161 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
HMGCLL1-202ENST00000308161 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
HMGCLL1-202ENST00000308161 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
HMGCLL1-202ENST00000308161 ADGRF5Q8IZF2 1346 aa25.16■■□□□ 1.62
HMGCLL1-202ENST00000308161 SETD1AO15047 1707 aaKnown RBP25.14■■□□□ 1.61
HMGCLL1-202ENST00000308161 PHLPP1O60346 1717 aa25.11■■□□□ 1.61
HMGCLL1-202ENST00000308161 ANKRD30BQ9BXX2 1392 aa25.11■■□□□ 1.61
HMGCLL1-202ENST00000308161 ADGRL3Q9HAR2 1447 aa25.1■■□□□ 1.61
HMGCLL1-202ENST00000308161 ROBO2Q9HCK4 1378 aa25.09■■□□□ 1.61
HMGCLL1-202ENST00000308161 DCCP43146 1447 aa25.09■■□□□ 1.61
HMGCLL1-202ENST00000308161 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
HMGCLL1-202ENST00000308161 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
HMGCLL1-202ENST00000308161 NALCNQ8IZF0 1738 aa25.07■■□□□ 1.6
HMGCLL1-202ENST00000308161 STK26Q9P289 416 aa25.07■■□□□ 1.6
HMGCLL1-202ENST00000308161 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
HMGCLL1-202ENST00000308161 MST1RQ04912 1400 aa25.05■■□□□ 1.6
HMGCLL1-202ENST00000308161 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
HMGCLL1-202ENST00000308161 COL16A1Q07092 1604 aaPredicted RBP25.02■■□□□ 1.6
HMGCLL1-202ENST00000308161 PIK3C2GO75747 1445 aa25.02■■□□□ 1.6
HMGCLL1-202ENST00000308161 JCADQ9P266 1359 aa25.02■■□□□ 1.6
HMGCLL1-202ENST00000308161 ASXL1Q8IXJ9 1541 aa25■■□□□ 1.59
HMGCLL1-202ENST00000308161 SOCS7O14512 581 aa25■■□□□ 1.59
HMGCLL1-202ENST00000308161 HRCP23327 699 aa25■■□□□ 1.59
HMGCLL1-202ENST00000308161 AHDC1Q5TGY3 1603 aaPredicted RBP24.99■■□□□ 1.59
HMGCLL1-202ENST00000308161 PRAG1Q86YV5 1406 aa24.99■■□□□ 1.59
HMGCLL1-202ENST00000308161 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
HMGCLL1-202ENST00000308161 MYOM2P54296 1465 aa24.95■■□□□ 1.59
HMGCLL1-202ENST00000308161 CFAP70Q5T0N1 1121 aa24.95■■□□□ 1.58
HMGCLL1-202ENST00000308161 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.58
HMGCLL1-202ENST00000308161 DDX17Q92841 729 aaKnown RBP24.95■■□□□ 1.58
HMGCLL1-202ENST00000308161 KDM2AQ9Y2K7 1162 aa24.94■■□□□ 1.58
HMGCLL1-202ENST00000308161 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
HMGCLL1-202ENST00000308161 C14orf93Q9H972 538 aaKnown RBP24.93■■□□□ 1.58
HMGCLL1-202ENST00000308161 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
HMGCLL1-202ENST00000308161 RGS17Q9UGC6 210 aaPredicted RBP24.91■■□□□ 1.58
HMGCLL1-202ENST00000308161 NRXN1Q9ULB1 1477 aa24.91■■□□□ 1.58
HMGCLL1-202ENST00000308161 TECPR2O15040 1411 aa24.91■■□□□ 1.58
HMGCLL1-202ENST00000308161 ABCC11Q96J66 1382 aa24.9■■□□□ 1.58
HMGCLL1-202ENST00000308161 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
HMGCLL1-202ENST00000308161 DCAF11Q8TEB1 546 aa24.9■■□□□ 1.58
HMGCLL1-202ENST00000308161 ORAI2Q96SN7 254 aa24.9■■□□□ 1.58
HMGCLL1-202ENST00000308161 NHSL1Q5SYE7 1610 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms