RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MYOM2P54296 1465 aa18.21■□□□□ 0.51
SHANK2-AS3-201ENST00000307548 PPLO60437 1756 aa18.2■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 SETD1BQ9UPS6 1966 aaKnown RBP18.2■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 NRXN1Q9ULB1 1477 aa18.18■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 PRAG1Q86YV5 1406 aa18.18■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 ARHGAP23Q9P227 1491 aa18.15■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 TMEM2Q9UHN6 1383 aa18.15■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 SLIT1O75093 1534 aa18.14■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.5
SHANK2-AS3-201ENST00000307548 ADGRF5Q8IZF2 1346 aa18.14■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 EIF4G2P78344 907 aaKnown RBP eCLIP18.14■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 TRPM1Q7Z4N2 1603 aa18.11■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 VGFO15240 615 aaPredicted RBP18.1■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 LMTK3Q96Q04 1460 aa18.09■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 KIAA1210Q9ULL0 1709 aa18.08■□□□□ 0.49
SHANK2-AS3-201ENST00000307548 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 HSPA2P54652 639 aa18.07■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 LTKP29376 864 aa18.06■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 LAMC1P11047 1609 aa18.05■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 NRXN3Q9Y4C0 1643 aa18.04■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 SETBP1Q9Y6X0 1596 aa18.04■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 USP47Q96K76 1375 aa18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 NBPF1Q3BBV0 1214 aa18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 PLEKHG1Q9ULL1 1385 aa18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 TXNDC2Q86VQ3 553 aa18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-AS3-201ENST00000307548 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 IQGAP1P46940 1657 aa18■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 MED14O60244 1454 aa18■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 POLR1AO95602 1720 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-AS3-201ENST00000307548 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 METP08581 1390 aa17.92■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 NPHP4O75161 1426 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 C11orf95C9JLR9 678 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 NCKAP5LQ9HCH0 1330 aa17.92■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 TBX22Q9Y458 520 aa17.91■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
SHANK2-AS3-201ENST00000307548 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 STRCQ7RTU9 1775 aa17.89■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 BCANQ96GW7 911 aa17.87■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 TESK2Q96S53 571 aa17.87■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 ABCC11Q96J66 1382 aa17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 PTPRUQ92729 1446 aa17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 TECPR2O15040 1411 aa17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 DLC1Q96QB1 1528 aa17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 KNDC1Q76NI1 1749 aa17.85■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 MIER1Q8N108 512 aa17.83■□□□□ 0.45
SHANK2-AS3-201ENST00000307548 CPS1P31327 1500 aa17.83■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 STK26Q9P289 416 aa17.82■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 TMF1P82094 1093 aa17.79■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 ROBO2Q9HCK4 1378 aa17.78■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
SHANK2-AS3-201ENST00000307548 PRAM1Q96QH2 718 aa17.77■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 PLEKHH1Q9ULM0 1364 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms