RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 IFT172Q9UG01 1749 aa20.69■□□□□ 0.9
TM4SF4-201ENST00000305354 CD109Q6YHK3 1445 aa20.69■□□□□ 0.9
TM4SF4-201ENST00000305354 PANK3Q9H999 370 aa20.68■□□□□ 0.9
TM4SF4-201ENST00000305354 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
TM4SF4-201ENST00000305354 ABCA6Q8N139 1617 aa20.65■□□□□ 0.9
TM4SF4-201ENST00000305354 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
TM4SF4-201ENST00000305354 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
TM4SF4-201ENST00000305354 NRXN1Q9ULB1 1477 aa20.63■□□□□ 0.89
TM4SF4-201ENST00000305354 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
TM4SF4-201ENST00000305354 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
TM4SF4-201ENST00000305354 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
TM4SF4-201ENST00000305354 NEO1Q92859 1461 aa20.62■□□□□ 0.89
TM4SF4-201ENST00000305354 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
TM4SF4-201ENST00000305354 BLMP54132 1417 aaPredicted RBP20.62■□□□□ 0.89
TM4SF4-201ENST00000305354 KDM5AP29375 1690 aaKnown RBP20.62■□□□□ 0.89
TM4SF4-201ENST00000305354 PDE3BQ13370 1112 aa20.62■□□□□ 0.89
TM4SF4-201ENST00000305354 MYOM1P52179 1685 aa20.61■□□□□ 0.89
TM4SF4-201ENST00000305354 CC2D1BQ5T0F9 858 aaKnown RBP20.6■□□□□ 0.89
TM4SF4-201ENST00000305354 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
TM4SF4-201ENST00000305354 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.89
TM4SF4-201ENST00000305354 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.89
TM4SF4-201ENST00000305354 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
TM4SF4-201ENST00000305354 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
TM4SF4-201ENST00000305354 NPATQ14207 1427 aa20.55■□□□□ 0.88
TM4SF4-201ENST00000305354 ABCC3O15438 1527 aa20.55■□□□□ 0.88
TM4SF4-201ENST00000305354 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
TM4SF4-201ENST00000305354 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
TM4SF4-201ENST00000305354 PPLO60437 1756 aa20.53■□□□□ 0.88
TM4SF4-201ENST00000305354 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
TM4SF4-201ENST00000305354 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
TM4SF4-201ENST00000305354 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.88
TM4SF4-201ENST00000305354 ERVK-7P63135 1459 aa20.52■□□□□ 0.88
TM4SF4-201ENST00000305354 CFAP70Q5T0N1 1121 aa20.51■□□□□ 0.87
TM4SF4-201ENST00000305354 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
TM4SF4-201ENST00000305354 NOS1P29475 1434 aa20.5■□□□□ 0.87
TM4SF4-201ENST00000305354 DIP2CQ9Y2E4 1556 aa20.5■□□□□ 0.87
TM4SF4-201ENST00000305354 RPGRIP1LQ68CZ1 1315 aa20.5■□□□□ 0.87
TM4SF4-201ENST00000305354 ZC3H13Q5T200 1668 aaKnown RBP20.49■□□□□ 0.87
TM4SF4-201ENST00000305354 PPP2R1AP30153 589 aa20.48■□□□□ 0.87
TM4SF4-201ENST00000305354 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
TM4SF4-201ENST00000305354 PIK3C2BO00750 1634 aa20.47■□□□□ 0.87
TM4SF4-201ENST00000305354 RRP1P56182 461 aaKnown RBP20.47■□□□□ 0.87
TM4SF4-201ENST00000305354 RCAN3Q9UKA8 241 aa20.47■□□□□ 0.87
TM4SF4-201ENST00000305354 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
TM4SF4-201ENST00000305354 ARHGAP31Q2M1Z3 1444 aa20.45■□□□□ 0.86
TM4SF4-201ENST00000305354 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
TM4SF4-201ENST00000305354 GGT6Q6P531 493 aa20.45■□□□□ 0.86
TM4SF4-201ENST00000305354 GLI2P10070 1586 aa20.44■□□□□ 0.86
TM4SF4-201ENST00000305354 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
TM4SF4-201ENST00000305354 ADGRB1O14514 1584 aa20.43■□□□□ 0.86
TM4SF4-201ENST00000305354 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
TM4SF4-201ENST00000305354 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
TM4SF4-201ENST00000305354 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
TM4SF4-201ENST00000305354 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
TM4SF4-201ENST00000305354 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
TM4SF4-201ENST00000305354 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
TM4SF4-201ENST00000305354 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.86
TM4SF4-201ENST00000305354 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.86
TM4SF4-201ENST00000305354 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.85
TM4SF4-201ENST00000305354 RAPGEF3O95398 923 aa20.38■□□□□ 0.85
TM4SF4-201ENST00000305354 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
TM4SF4-201ENST00000305354 NEXMIFQ5QGS0 1516 aa20.37■□□□□ 0.85
TM4SF4-201ENST00000305354 CDCA7LQ96GN5 454 aa20.36■□□□□ 0.85
TM4SF4-201ENST00000305354 USP32Q8NFA0 1604 aa20.34■□□□□ 0.85
TM4SF4-201ENST00000305354 ZFYVE9O95405 1425 aa20.34■□□□□ 0.85
TM4SF4-201ENST00000305354 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.84
TM4SF4-201ENST00000305354 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
TM4SF4-201ENST00000305354 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
TM4SF4-201ENST00000305354 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
TM4SF4-201ENST00000305354 ARHGEF28Q8N1W1 1705 aaKnown RBP20.31■□□□□ 0.84
TM4SF4-201ENST00000305354 YEATS2Q9ULM3 1422 aa20.31■□□□□ 0.84
TM4SF4-201ENST00000305354 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
TM4SF4-201ENST00000305354 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
TM4SF4-201ENST00000305354 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
TM4SF4-201ENST00000305354 SLC52A1Q9NWF4 448 aa20.3■□□□□ 0.84
TM4SF4-201ENST00000305354 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
TM4SF4-201ENST00000305354 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
TM4SF4-201ENST00000305354 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
TM4SF4-201ENST00000305354 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
TM4SF4-201ENST00000305354 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
TM4SF4-201ENST00000305354 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
TM4SF4-201ENST00000305354 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
TM4SF4-201ENST00000305354 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
TM4SF4-201ENST00000305354 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
TM4SF4-201ENST00000305354 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
TM4SF4-201ENST00000305354 EVC2Q86UK5 1308 aa20.24■□□□□ 0.83
TM4SF4-201ENST00000305354 TULP4Q9NRJ4 1543 aa20.24■□□□□ 0.83
TM4SF4-201ENST00000305354 IDI1Q13907 227 aa20.23■□□□□ 0.83
TM4SF4-201ENST00000305354 MSH5O43196 834 aa20.22■□□□□ 0.83
TM4SF4-201ENST00000305354 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 NSD2O96028 1365 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 AGLP35573 1532 aa20.21■□□□□ 0.83
TM4SF4-201ENST00000305354 TRMT2AQ8IZ69 625 aaKnown RBP20.2■□□□□ 0.82
TM4SF4-201ENST00000305354 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
TM4SF4-201ENST00000305354 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
TM4SF4-201ENST00000305354 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
TM4SF4-201ENST00000305354 MORC1Q86VD1 984 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms