RNA–Protein interactions for RNA: ENST00000303145.11

MDM1-201, Transcript of Mdm1 nuclear protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MDM1, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-201ENST00000303145 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
MDM1-201ENST00000303145 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
MDM1-201ENST00000303145 TMF1P82094 1093 aa17.35■□□□□ 0.37
MDM1-201ENST00000303145 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
MDM1-201ENST00000303145 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
MDM1-201ENST00000303145 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
MDM1-201ENST00000303145 SEC24BO95487 1268 aa17.34■□□□□ 0.37
MDM1-201ENST00000303145 IGHDP01880 384 aa17.34■□□□□ 0.37
MDM1-201ENST00000303145 UNC13BO14795 1591 aa17.34■□□□□ 0.37
MDM1-201ENST00000303145 PLXNC1O60486 1568 aa17.33■□□□□ 0.36
MDM1-201ENST00000303145 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
MDM1-201ENST00000303145 SYNMO15061 1565 aa17.32■□□□□ 0.36
MDM1-201ENST00000303145 FSD2A1L4K1 749 aa17.32■□□□□ 0.36
MDM1-201ENST00000303145 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
MDM1-201ENST00000303145 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
MDM1-201ENST00000303145 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
MDM1-201ENST00000303145 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
MDM1-201ENST00000303145 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
MDM1-201ENST00000303145 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
MDM1-201ENST00000303145 CHD1O14646 1710 aa17.3■□□□□ 0.36
MDM1-201ENST00000303145 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
MDM1-201ENST00000303145 ABCA8O94911 1581 aa17.29■□□□□ 0.36
MDM1-201ENST00000303145 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
MDM1-201ENST00000303145 BCAR3O75815 825 aa17.29■□□□□ 0.36
MDM1-201ENST00000303145 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
MDM1-201ENST00000303145 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
MDM1-201ENST00000303145 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
MDM1-201ENST00000303145 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
MDM1-201ENST00000303145 CLCN1P35523 988 aa17.28■□□□□ 0.36
MDM1-201ENST00000303145 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
MDM1-201ENST00000303145 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.36
MDM1-201ENST00000303145 ATP10AO60312 1499 aa17.27■□□□□ 0.35
MDM1-201ENST00000303145 IQGAP3Q86VI3 1631 aa17.27■□□□□ 0.35
MDM1-201ENST00000303145 RGL3Q3MIN7 710 aa17.27■□□□□ 0.35
MDM1-201ENST00000303145 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.35
MDM1-201ENST00000303145 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
MDM1-201ENST00000303145 TBC1D32Q96NH3 1257 aa17.26■□□□□ 0.35
MDM1-201ENST00000303145 MYOM1P52179 1685 aa17.26■□□□□ 0.35
MDM1-201ENST00000303145 E9PSI1 815 aa17.26■□□□□ 0.35
MDM1-201ENST00000303145 GLIPR1L2Q4G1C9 344 aa17.26■□□□□ 0.35
MDM1-201ENST00000303145 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
MDM1-201ENST00000303145 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
MDM1-201ENST00000303145 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
MDM1-201ENST00000303145 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
MDM1-201ENST00000303145 GOLGA6L3A6NEY3 463 aa17.25■□□□□ 0.35
MDM1-201ENST00000303145 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
MDM1-201ENST00000303145 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
MDM1-201ENST00000303145 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
MDM1-201ENST00000303145 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
MDM1-201ENST00000303145 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
MDM1-201ENST00000303145 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
MDM1-201ENST00000303145 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
MDM1-201ENST00000303145 MCM4P33991 863 aa17.21■□□□□ 0.35
MDM1-201ENST00000303145 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
MDM1-201ENST00000303145 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
MDM1-201ENST00000303145 ATP10BO94823 1461 aa17.21■□□□□ 0.35
MDM1-201ENST00000303145 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 APAF1O14727 1248 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 CDC42BPBQ9Y5S2 1711 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 RRP9O43818 475 aaKnown RBP17.2■□□□□ 0.34
MDM1-201ENST00000303145 AAMPQ13685 434 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
MDM1-201ENST00000303145 UPF2Q9HAU5 1272 aaKnown RBP17.2■□□□□ 0.34
MDM1-201ENST00000303145 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
MDM1-201ENST00000303145 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
MDM1-201ENST00000303145 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
MDM1-201ENST00000303145 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
MDM1-201ENST00000303145 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
MDM1-201ENST00000303145 CARMIL2Q6F5E8 1435 aa17.17■□□□□ 0.34
MDM1-201ENST00000303145 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
MDM1-201ENST00000303145 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
MDM1-201ENST00000303145 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
MDM1-201ENST00000303145 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
MDM1-201ENST00000303145 MRE11P49959 708 aa17.16■□□□□ 0.34
MDM1-201ENST00000303145 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
MDM1-201ENST00000303145 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
MDM1-201ENST00000303145 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
MDM1-201ENST00000303145 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
MDM1-201ENST00000303145 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
MDM1-201ENST00000303145 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
MDM1-201ENST00000303145 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
MDM1-201ENST00000303145 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
MDM1-201ENST00000303145 TRAK2O60296 914 aa17.13■□□□□ 0.33
MDM1-201ENST00000303145 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
MDM1-201ENST00000303145 DUOX2Q9NRD8 1548 aa17.13■□□□□ 0.33
MDM1-201ENST00000303145 CEP152O94986 1710 aa17.12■□□□□ 0.33
MDM1-201ENST00000303145 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
MDM1-201ENST00000303145 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
MDM1-201ENST00000303145 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
MDM1-201ENST00000303145 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
MDM1-201ENST00000303145 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
MDM1-201ENST00000303145 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
MDM1-201ENST00000303145 ARXQ96QS3 562 aa17.1■□□□□ 0.33
MDM1-201ENST00000303145 GZF1Q9H116 711 aaPredicted RBP17.1■□□□□ 0.33
MDM1-201ENST00000303145 TTC37Q6PGP7 1564 aa17.1■□□□□ 0.33
MDM1-201ENST00000303145 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
MDM1-201ENST00000303145 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
MDM1-201ENST00000303145 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms