RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 DIAPH1O60610 1272 aaKnown RBP10.73□□□□□ -0.69
SCN11A-201ENST00000302328 TOM1L2Q6ZVM7 507 aa10.73□□□□□ -0.69
SCN11A-201ENST00000302328 VPS37DQ86XT2 251 aa10.73□□□□□ -0.69
SCN11A-201ENST00000302328 SLC52A1Q9NWF4 448 aa10.73□□□□□ -0.69
SCN11A-201ENST00000302328 HMMRO75330 724 aa10.73□□□□□ -0.69
SCN11A-201ENST00000302328 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
SCN11A-201ENST00000302328 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
SCN11A-201ENST00000302328 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
SCN11A-201ENST00000302328 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
SCN11A-201ENST00000302328 PLB1Q6P1J6 1458 aa10.72□□□□□ -0.69
SCN11A-201ENST00000302328 PRAM1Q96QH2 718 aa10.71□□□□□ -0.69
SCN11A-201ENST00000302328 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.7
SCN11A-201ENST00000302328 DDX58O95786 925 aaKnown RBP10.71□□□□□ -0.7
SCN11A-201ENST00000302328 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.7
SCN11A-201ENST00000302328 DENND4BO75064 1496 aaPredicted RBP10.7□□□□□ -0.7
SCN11A-201ENST00000302328 PHLDB1Q86UU1 1377 aa10.7□□□□□ -0.7
SCN11A-201ENST00000302328 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
SCN11A-201ENST00000302328 CDK13Q14004 1512 aaKnown RBP10.7□□□□□ -0.7
SCN11A-201ENST00000302328 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
SCN11A-201ENST00000302328 KIF21AQ7Z4S6 1674 aa10.7□□□□□ -0.7
SCN11A-201ENST00000302328 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
SCN11A-201ENST00000302328 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
SCN11A-201ENST00000302328 HMGB2P26583 209 aaKnown RBP10.69□□□□□ -0.7
SCN11A-201ENST00000302328 USP47Q96K76 1375 aa10.69□□□□□ -0.7
SCN11A-201ENST00000302328 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
SCN11A-201ENST00000302328 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
SCN11A-201ENST00000302328 NLRP13Q86W25 1043 aa10.69□□□□□ -0.7
SCN11A-201ENST00000302328 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
SCN11A-201ENST00000302328 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
SCN11A-201ENST00000302328 VPS53Q5VIR6 699 aa10.68□□□□□ -0.7
SCN11A-201ENST00000302328 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
SCN11A-201ENST00000302328 ERBINQ96RT1 1412 aa10.68□□□□□ -0.7
SCN11A-201ENST00000302328 CDK19Q9BWU1 502 aa10.68□□□□□ -0.7
SCN11A-201ENST00000302328 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
SCN11A-201ENST00000302328 C9orf78Q9NZ63 289 aaPredicted RBP10.67□□□□□ -0.7
SCN11A-201ENST00000302328 DDX54Q8TDD1 881 aaKnown RBP10.67□□□□□ -0.7
SCN11A-201ENST00000302328 RAD21O60216 631 aa10.67□□□□□ -0.7
SCN11A-201ENST00000302328 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
SCN11A-201ENST00000302328 CEBPAP49715 358 aaPredicted RBP10.66□□□□□ -0.7
SCN11A-201ENST00000302328 XPCQ01831 940 aaPredicted RBP10.66□□□□□ -0.7
SCN11A-201ENST00000302328 RWDD1Q9H446 243 aaPredicted RBP10.66□□□□□ -0.7
SCN11A-201ENST00000302328 PRDM11Q9NQV5 511 aa10.66□□□□□ -0.7
SCN11A-201ENST00000302328 RTEL1-TNFRSF6BF6WH68 1400 aa10.66□□□□□ -0.7
SCN11A-201ENST00000302328 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
SCN11A-201ENST00000302328 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
SCN11A-201ENST00000302328 GOLGA6L4A6NEF3 574 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 MYBBP1AQ9BQG0 1328 aaKnown RBP10.65□□□□□ -0.7
SCN11A-201ENST00000302328 FANCAO15360 1455 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 TOM1O60784 492 aa10.65□□□□□ -0.7
SCN11A-201ENST00000302328 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.71
SCN11A-201ENST00000302328 CABP4P57796 275 aa10.65□□□□□ -0.71
SCN11A-201ENST00000302328 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
SCN11A-201ENST00000302328 HMOX1P09601 288 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 GGNBP2Q9H3C7 697 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 LRPPRCP42704 1394 aaKnown RBP10.64□□□□□ -0.71
SCN11A-201ENST00000302328 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
SCN11A-201ENST00000302328 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
SCN11A-201ENST00000302328 RIPK4P57078 832 aa10.63□□□□□ -0.71
SCN11A-201ENST00000302328 MARCH6O60337 910 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 GOLGA6L6A8MZA4 724 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 AIMP1Q12904 312 aaKnown RBP10.62□□□□□ -0.71
SCN11A-201ENST00000302328 LRRFIP1Q32MZ4 808 aaKnown RBP10.62□□□□□ -0.71
SCN11A-201ENST00000302328 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 HSCBQ8IWL3 235 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 DAPK1P53355 1430 aa10.62□□□□□ -0.71
SCN11A-201ENST00000302328 TCEAL9Q9UHQ7 104 aa10.61□□□□□ -0.71
SCN11A-201ENST00000302328 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
SCN11A-201ENST00000302328 PEG3Q9GZU2 1588 aa10.61□□□□□ -0.71
SCN11A-201ENST00000302328 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
SCN11A-201ENST00000302328 PPP4R2Q9NY27 417 aa10.6□□□□□ -0.71
SCN11A-201ENST00000302328 GAS2L2Q8NHY3 880 aa10.6□□□□□ -0.71
SCN11A-201ENST00000302328 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
SCN11A-201ENST00000302328 MSH6P52701 1360 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 NBR1Q14596 966 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 ANP32EQ9BTT0 268 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 PRXQ9BXM0 1461 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
SCN11A-201ENST00000302328 PCF11O94913 1555 aaKnown RBP10.58□□□□□ -0.72
SCN11A-201ENST00000302328 ROCK1Q13464 1354 aa10.58□□□□□ -0.72
SCN11A-201ENST00000302328 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
SCN11A-201ENST00000302328 ZC3H6P61129 1189 aaKnown RBP10.58□□□□□ -0.72
SCN11A-201ENST00000302328 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 PTMAP06454 111 aaKnown RBP10.57□□□□□ -0.72
SCN11A-201ENST00000302328 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
SCN11A-201ENST00000302328 TNRQ92752 1358 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 RASSF8Q8NHQ8 419 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 RAPGEF6Q8TEU7 1601 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
SCN11A-201ENST00000302328 PLIN1O60240 522 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms