RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
PDGFD-201ENST00000302251 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
PDGFD-201ENST00000302251 E9PSI1 815 aa15.28■□□□□ 0.04
PDGFD-201ENST00000302251 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
PDGFD-201ENST00000302251 ELL2O00472 640 aaPredicted RBP15.28■□□□□ 0.04
PDGFD-201ENST00000302251 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
PDGFD-201ENST00000302251 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.03
PDGFD-201ENST00000302251 PLEKHG5O94827 1062 aa15.27■□□□□ 0.03
PDGFD-201ENST00000302251 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.03
PDGFD-201ENST00000302251 NUP160Q12769 1436 aa15.26■□□□□ 0.03
PDGFD-201ENST00000302251 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
PDGFD-201ENST00000302251 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
PDGFD-201ENST00000302251 STK26Q9P289 416 aa15.26■□□□□ 0.03
PDGFD-201ENST00000302251 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
PDGFD-201ENST00000302251 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
PDGFD-201ENST00000302251 ANKRD50Q9ULJ7 1429 aa15.25■□□□□ 0.03
PDGFD-201ENST00000302251 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
PDGFD-201ENST00000302251 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
PDGFD-201ENST00000302251 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
PDGFD-201ENST00000302251 KDM5CP41229 1560 aa15.25■□□□□ 0.03
PDGFD-201ENST00000302251 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
PDGFD-201ENST00000302251 TRAK2O60296 914 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 E9PCH4 1651 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 SRPK2P78362 688 aaKnown RBP15.24■□□□□ 0.03
PDGFD-201ENST00000302251 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
PDGFD-201ENST00000302251 ABCC10Q5T3U5 1492 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 CHMP5Q9NZZ3 219 aa15.24■□□□□ 0.03
PDGFD-201ENST00000302251 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
PDGFD-201ENST00000302251 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
PDGFD-201ENST00000302251 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
PDGFD-201ENST00000302251 TRAK1Q9UPV9 953 aa15.23■□□□□ 0.03
PDGFD-201ENST00000302251 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
PDGFD-201ENST00000302251 CAMSAP2Q08AD1 1489 aa15.22■□□□□ 0.03
PDGFD-201ENST00000302251 PPP2R1AP30153 589 aa15.22■□□□□ 0.03
PDGFD-201ENST00000302251 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
PDGFD-201ENST00000302251 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
PDGFD-201ENST00000302251 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
PDGFD-201ENST00000302251 DDX11L8A8MPP1 907 aa15.21■□□□□ 0.03
PDGFD-201ENST00000302251 SOX12O15370 315 aa15.21■□□□□ 0.03
PDGFD-201ENST00000302251 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.02
PDGFD-201ENST00000302251 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
PDGFD-201ENST00000302251 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
PDGFD-201ENST00000302251 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
PDGFD-201ENST00000302251 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
PDGFD-201ENST00000302251 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
PDGFD-201ENST00000302251 DHX29Q7Z478 1369 aaKnown RBP15.19■□□□□ 0.02
PDGFD-201ENST00000302251 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
PDGFD-201ENST00000302251 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
PDGFD-201ENST00000302251 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
PDGFD-201ENST00000302251 KIF3BO15066 747 aa15.17■□□□□ 0.02
PDGFD-201ENST00000302251 GGT6Q6P531 493 aa15.17■□□□□ 0.02
PDGFD-201ENST00000302251 CHD1O14646 1710 aa15.17■□□□□ 0.02
PDGFD-201ENST00000302251 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
PDGFD-201ENST00000302251 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
PDGFD-201ENST00000302251 MRE11P49959 708 aa15.15■□□□□ 0.02
PDGFD-201ENST00000302251 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
PDGFD-201ENST00000302251 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
PDGFD-201ENST00000302251 MCM4P33991 863 aa15.13■□□□□ 0.01
PDGFD-201ENST00000302251 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
PDGFD-201ENST00000302251 PREX2Q70Z35 1606 aa15.13■□□□□ 0.01
PDGFD-201ENST00000302251 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
PDGFD-201ENST00000302251 SAMD9LQ8IVG5 1584 aa15.13■□□□□ 0.01
PDGFD-201ENST00000302251 IGHDP01880 384 aa15.12■□□□□ 0.01
PDGFD-201ENST00000302251 R3HCC1Q9Y3T6 440 aaKnown RBP15.12■□□□□ 0.01
PDGFD-201ENST00000302251 MPNDQ8N594 471 aa15.11■□□□□ 0.01
PDGFD-201ENST00000302251 PTPRGP23470 1445 aa15.11■□□□□ 0.01
PDGFD-201ENST00000302251 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 PANK2Q9BZ23 570 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 CHMP4BQ9H444 224 aaKnown RBP15.1■□□□□ 0.01
PDGFD-201ENST00000302251 MCTP1Q6DN14 999 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
PDGFD-201ENST00000302251 MYO5CQ9NQX4 1742 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 ATP10BO94823 1461 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
PDGFD-201ENST00000302251 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDGFD-201ENST00000302251 ARHGEF5Q12774 1597 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 ESPNB1AK53 854 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 UBE2Q2Q8WVN8 375 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 GRPEL1Q9HAV7 217 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 SHANK2Q9UPX8 1470 aa15.09■□□□□ 0.01
PDGFD-201ENST00000302251 NASPP49321 788 aaPredicted RBP15.08■□□□□ 0.01
PDGFD-201ENST00000302251 TBC1D2Q9BYX2 928 aa15.08■□□□□ 0.01
PDGFD-201ENST00000302251 MTHFSP49914 203 aa15.08■□□□□ 0
PDGFD-201ENST00000302251 C8orf34Q49A92 452 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 SEC24BO95487 1268 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 PDE3AQ14432 1141 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 SKOR2Q2VWA4 1001 aaPredicted RBP15.07■□□□□ 0
PDGFD-201ENST00000302251 SLC4A10Q6U841 1118 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 DRC7Q8IY82 874 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 RUNDC1Q96C34 613 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
PDGFD-201ENST00000302251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms