RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 NPATQ14207 1427 aa16.79■□□□□ 0.28
TPM3-202ENST00000302206 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
TPM3-202ENST00000302206 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
TPM3-202ENST00000302206 KIF1BO60333 1816 aa16.79■□□□□ 0.28
TPM3-202ENST00000302206 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
TPM3-202ENST00000302206 GGT6Q6P531 493 aa16.78■□□□□ 0.28
TPM3-202ENST00000302206 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
TPM3-202ENST00000302206 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
TPM3-202ENST00000302206 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
TPM3-202ENST00000302206 NOS1P29475 1434 aa16.77■□□□□ 0.27
TPM3-202ENST00000302206 MYOM2P54296 1465 aa16.76■□□□□ 0.27
TPM3-202ENST00000302206 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
TPM3-202ENST00000302206 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
TPM3-202ENST00000302206 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
TPM3-202ENST00000302206 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
TPM3-202ENST00000302206 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
TPM3-202ENST00000302206 ANP32CO43423 234 aa16.72■□□□□ 0.27
TPM3-202ENST00000302206 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
TPM3-202ENST00000302206 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
TPM3-202ENST00000302206 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
TPM3-202ENST00000302206 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
TPM3-202ENST00000302206 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
TPM3-202ENST00000302206 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
TPM3-202ENST00000302206 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
TPM3-202ENST00000302206 SYNMO15061 1565 aa16.69■□□□□ 0.26
TPM3-202ENST00000302206 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
TPM3-202ENST00000302206 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
TPM3-202ENST00000302206 IQGAP1P46940 1657 aa16.66■□□□□ 0.26
TPM3-202ENST00000302206 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
TPM3-202ENST00000302206 PPLO60437 1756 aa16.65■□□□□ 0.26
TPM3-202ENST00000302206 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
TPM3-202ENST00000302206 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
TPM3-202ENST00000302206 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
TPM3-202ENST00000302206 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
TPM3-202ENST00000302206 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
TPM3-202ENST00000302206 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
TPM3-202ENST00000302206 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
TPM3-202ENST00000302206 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
TPM3-202ENST00000302206 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
TPM3-202ENST00000302206 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
TPM3-202ENST00000302206 TESK2Q96S53 571 aa16.59■□□□□ 0.25
TPM3-202ENST00000302206 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
TPM3-202ENST00000302206 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
TPM3-202ENST00000302206 ADGRF5Q8IZF2 1346 aa16.58■□□□□ 0.24
TPM3-202ENST00000302206 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
TPM3-202ENST00000302206 PIK3C2GO75747 1445 aa16.58■□□□□ 0.24
TPM3-202ENST00000302206 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
TPM3-202ENST00000302206 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
TPM3-202ENST00000302206 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
TPM3-202ENST00000302206 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
TPM3-202ENST00000302206 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
TPM3-202ENST00000302206 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
TPM3-202ENST00000302206 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
TPM3-202ENST00000302206 IDI1Q13907 227 aa16.56■□□□□ 0.24
TPM3-202ENST00000302206 TMF1P82094 1093 aa16.55■□□□□ 0.24
TPM3-202ENST00000302206 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
TPM3-202ENST00000302206 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
TPM3-202ENST00000302206 HSPA1LP34931 641 aa16.54■□□□□ 0.24
TPM3-202ENST00000302206 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
TPM3-202ENST00000302206 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
TPM3-202ENST00000302206 TOM1O60784 492 aa16.52■□□□□ 0.24
TPM3-202ENST00000302206 PIP4K2BP78356 416 aa16.52■□□□□ 0.24
TPM3-202ENST00000302206 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
TPM3-202ENST00000302206 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
TPM3-202ENST00000302206 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
TPM3-202ENST00000302206 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
TPM3-202ENST00000302206 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
TPM3-202ENST00000302206 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
TPM3-202ENST00000302206 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
TPM3-202ENST00000302206 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
TPM3-202ENST00000302206 CPS1P31327 1500 aa16.48■□□□□ 0.23
TPM3-202ENST00000302206 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
TPM3-202ENST00000302206 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
TPM3-202ENST00000302206 RALBP1Q15311 655 aa16.42■□□□□ 0.22
TPM3-202ENST00000302206 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
TPM3-202ENST00000302206 TNRQ92752 1358 aa16.41■□□□□ 0.22
TPM3-202ENST00000302206 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
TPM3-202ENST00000302206 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
TPM3-202ENST00000302206 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
TPM3-202ENST00000302206 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
TPM3-202ENST00000302206 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.21
TPM3-202ENST00000302206 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
TPM3-202ENST00000302206 MYOM1P52179 1685 aa16.38■□□□□ 0.21
TPM3-202ENST00000302206 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
TPM3-202ENST00000302206 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
TPM3-202ENST00000302206 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
TPM3-202ENST00000302206 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
TPM3-202ENST00000302206 PANK3Q9H999 370 aa16.37■□□□□ 0.21
TPM3-202ENST00000302206 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
TPM3-202ENST00000302206 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
TPM3-202ENST00000302206 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
TPM3-202ENST00000302206 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
TPM3-202ENST00000302206 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
TPM3-202ENST00000302206 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
TPM3-202ENST00000302206 BRD4O60885 1362 aaPredicted RBP16.35■□□□□ 0.21
TPM3-202ENST00000302206 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
TPM3-202ENST00000302206 UBR1Q8IWV7 1749 aa16.34■□□□□ 0.21
TPM3-202ENST00000302206 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
TPM3-202ENST00000302206 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
TPM3-202ENST00000302206 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms