RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 KIF1BO60333 1816 aa33.61■■■□□ 2.97
GFRA4-201ENST00000290417 HDGFP51858 240 aaKnown RBP33.6■■■□□ 2.97
GFRA4-201ENST00000290417 ILDR1Q86SU0 546 aaPredicted RBP33.6■■■□□ 2.97
GFRA4-201ENST00000290417 PPP1R15AO75807 674 aaPredicted RBP33.58■■■□□ 2.97
GFRA4-201ENST00000290417 FBXO41Q8TF61 875 aa33.57■■■□□ 2.96
GFRA4-201ENST00000290417 NUTM2DQ5VT03 806 aaPredicted RBP33.55■■■□□ 2.96
GFRA4-201ENST00000290417 BCANQ96GW7 911 aa33.55■■■□□ 2.96
GFRA4-201ENST00000290417 SENP3Q9H4L4 574 aaPredicted RBP33.55■■■□□ 2.96
GFRA4-201ENST00000290417 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.54■■■□□ 2.96
GFRA4-201ENST00000290417 ZNF326Q5BKZ1 582 aaKnown RBP33.53■■■□□ 2.96
GFRA4-201ENST00000290417 STRCP1A6NGW2 1772 aa33.53■■■□□ 2.96
GFRA4-201ENST00000290417 CPS1P31327 1500 aa33.53■■■□□ 2.96
GFRA4-201ENST00000290417 PLEKHG1Q9ULL1 1385 aa33.51■■■□□ 2.95
GFRA4-201ENST00000290417 SLC26A8Q96RN1 970 aa33.5■■■□□ 2.95
GFRA4-201ENST00000290417 IQSEC2Q5JU85 1478 aa33.5■■■□□ 2.95
GFRA4-201ENST00000290417 HRCP23327 699 aa33.47■■■□□ 2.95
GFRA4-201ENST00000290417 CCDC144AA2RUR9 1427 aa33.46■■■□□ 2.95
GFRA4-201ENST00000290417 NEXMIFQ5QGS0 1516 aa33.42■■■□□ 2.94
GFRA4-201ENST00000290417 ADAMTS13Q76LX8 1427 aa33.36■■■□□ 2.93
GFRA4-201ENST00000290417 LRRC7Q96NW7 1537 aa33.36■■■□□ 2.93
GFRA4-201ENST00000290417 DIP2AQ14689 1571 aa33.35■■■□□ 2.93
GFRA4-201ENST00000290417 TBX22Q9Y458 520 aa33.35■■■□□ 2.93
GFRA4-201ENST00000290417 KCNA6P17658 529 aa33.34■■■□□ 2.93
GFRA4-201ENST00000290417 CHD2O14647 1828 aaKnown RBP33.34■■■□□ 2.93
GFRA4-201ENST00000290417 PPLO60437 1756 aa33.33■■■□□ 2.93
GFRA4-201ENST00000290417 NRXN3Q9Y4C0 1643 aa33.33■■■□□ 2.93
GFRA4-201ENST00000290417 NWD1Q149M9 1564 aa33.31■■■□□ 2.92
GFRA4-201ENST00000290417 RPGRIP1LQ68CZ1 1315 aa33.31■■■□□ 2.92
GFRA4-201ENST00000290417 SETBP1Q9Y6X0 1596 aa33.31■■■□□ 2.92
GFRA4-201ENST00000290417 RGL3Q3MIN7 710 aa33.3■■■□□ 2.92
GFRA4-201ENST00000290417 SPATA31E1Q6ZUB1 1445 aa33.3■■■□□ 2.92
GFRA4-201ENST00000290417 UBAP1LF5GYI3 381 aa33.29■■■□□ 2.92
GFRA4-201ENST00000290417 VGFO15240 615 aaPredicted RBP33.28■■■□□ 2.92
GFRA4-201ENST00000290417 XIRP1Q702N8 1843 aaKnown RBP33.27■■■□□ 2.92
GFRA4-201ENST00000290417 ANKRD30BQ9BXX2 1392 aa33.25■■■□□ 2.91
GFRA4-201ENST00000290417 NKTRP30414 1462 aaKnown RBP33.25■■■□□ 2.91
GFRA4-201ENST00000290417 TRIM26Q12899 539 aaPredicted RBP33.24■■■□□ 2.91
GFRA4-201ENST00000290417 IFT172Q9UG01 1749 aa33.23■■■□□ 2.91
GFRA4-201ENST00000290417 PROSER2Q86WR7 435 aaPredicted RBP33.23■■■□□ 2.91
GFRA4-201ENST00000290417 PIK3R4Q99570 1358 aa33.22■■■□□ 2.91
GFRA4-201ENST00000290417 TMEM94Q12767 1356 aa33.19■■■□□ 2.9
GFRA4-201ENST00000290417 TOM1O60784 492 aa33.18■■■□□ 2.9
GFRA4-201ENST00000290417 RBM33Q96EV2 1170 aaKnown RBP33.18■■■□□ 2.9
GFRA4-201ENST00000290417 PTPRUQ92729 1446 aa33.16■■■□□ 2.9
GFRA4-201ENST00000290417 METP08581 1390 aa33.15■■■□□ 2.9
GFRA4-201ENST00000290417 AMOTL2Q9Y2J4 779 aa33.14■■■□□ 2.9
GFRA4-201ENST00000290417 SETD1AO15047 1707 aaKnown RBP33.14■■■□□ 2.9
GFRA4-201ENST00000290417 ALKQ9UM73 1620 aa33.14■■■□□ 2.89
GFRA4-201ENST00000290417 ADGRF5Q8IZF2 1346 aa33.13■■■□□ 2.89
GFRA4-201ENST00000290417 SCAF1Q9H7N4 1312 aaKnown RBP33.12■■■□□ 2.89
GFRA4-201ENST00000290417 PIP4K2BP78356 416 aa33.11■■■□□ 2.89
GFRA4-201ENST00000290417 XRN1Q8IZH2 1706 aaKnown RBP33.11■■■□□ 2.89
GFRA4-201ENST00000290417 MSH6P52701 1360 aa33.03■■■□□ 2.88
GFRA4-201ENST00000290417 MYOM2P54296 1465 aa33.02■■■□□ 2.88
GFRA4-201ENST00000290417 C14orf37Q86TY3 774 aa33.02■■■□□ 2.88
GFRA4-201ENST00000290417 PIK3C2GO75747 1445 aa33.01■■■□□ 2.88
GFRA4-201ENST00000290417 NCOA3Q9Y6Q9 1424 aa33■■■□□ 2.87
GFRA4-201ENST00000290417 NRXN1Q9ULB1 1477 aa32.97■■■□□ 2.87
GFRA4-201ENST00000290417 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.86
GFRA4-201ENST00000290417 DCAF11Q8TEB1 546 aa32.94■■■□□ 2.86
GFRA4-201ENST00000290417 KDM2AQ9Y2K7 1162 aa32.94■■■□□ 2.86
GFRA4-201ENST00000290417 LAMC1P11047 1609 aa32.92■■■□□ 2.86
GFRA4-201ENST00000290417 DHX57Q6P158 1386 aaKnown RBP32.91■■■□□ 2.86
GFRA4-201ENST00000290417 C19orf44Q9H6X5 657 aa32.91■■■□□ 2.86
GFRA4-201ENST00000290417 PTCH1Q13635 1447 aa32.9■■■□□ 2.86
GFRA4-201ENST00000290417 ASXL1Q8IXJ9 1541 aa32.9■■■□□ 2.86
GFRA4-201ENST00000290417 TMEM132EQ6IEE7 984 aa32.9■■■□□ 2.86
GFRA4-201ENST00000290417 C14orf93Q9H972 538 aaKnown RBP32.89■■■□□ 2.86
GFRA4-201ENST00000290417 ROBO2Q9HCK4 1378 aa32.89■■■□□ 2.86
GFRA4-201ENST00000290417 CFAP70Q5T0N1 1121 aa32.88■■■□□ 2.85
GFRA4-201ENST00000290417 HSPA1LP34931 641 aa32.87■■■□□ 2.85
GFRA4-201ENST00000290417 STK26Q9P289 416 aa32.87■■■□□ 2.85
GFRA4-201ENST00000290417 PRAG1Q86YV5 1406 aa32.87■■■□□ 2.85
GFRA4-201ENST00000290417 ATF3P18847 181 aa32.86■■■□□ 2.85
GFRA4-201ENST00000290417 NALCNQ8IZF0 1738 aa32.86■■■□□ 2.85
GFRA4-201ENST00000290417 ROBO1Q9Y6N7 1651 aa32.85■■■□□ 2.85
GFRA4-201ENST00000290417 STAC3Q96MF2 364 aa32.85■■■□□ 2.85
GFRA4-201ENST00000290417 SLAIN2Q9P270 581 aa32.85■■■□□ 2.85
GFRA4-201ENST00000290417 LRPPRCP42704 1394 aaKnown RBP32.84■■■□□ 2.85
GFRA4-201ENST00000290417 CADPS2Q86UW7 1296 aa32.84■■■□□ 2.85
GFRA4-201ENST00000290417 SIN3AQ96ST3 1273 aa32.84■■■□□ 2.85
GFRA4-201ENST00000290417 KNDC1Q76NI1 1749 aa32.83■■■□□ 2.85
GFRA4-201ENST00000290417 FAM135BQ49AJ0 1406 aa32.82■■■□□ 2.84
GFRA4-201ENST00000290417 ADGRL3Q9HAR2 1447 aa32.82■■■□□ 2.84
GFRA4-201ENST00000290417 YTHDC2Q9H6S0 1430 aaKnown RBP32.81■■■□□ 2.84
GFRA4-201ENST00000290417 DCCP43146 1447 aa32.8■■■□□ 2.84
GFRA4-201ENST00000290417 TECPR2O15040 1411 aa32.79■■■□□ 2.84
GFRA4-201ENST00000290417 ABCC11Q96J66 1382 aa32.79■■■□□ 2.84
GFRA4-201ENST00000290417 NEUROD1Q13562 356 aa32.78■■■□□ 2.84
GFRA4-201ENST00000290417 PCGF6Q9BYE7 350 aa32.74■■■□□ 2.83
GFRA4-201ENST00000290417 WAPLQ7Z5K2 1190 aa32.73■■■□□ 2.83
GFRA4-201ENST00000290417 ADGRB1O14514 1584 aa32.72■■■□□ 2.83
GFRA4-201ENST00000290417 PLEKHH1Q9ULM0 1364 aa32.7■■■□□ 2.82
GFRA4-201ENST00000290417 MST1RQ04912 1400 aa32.69■■■□□ 2.82
GFRA4-201ENST00000290417 L3MBTL2Q969R5 705 aa32.68■■■□□ 2.82
GFRA4-201ENST00000290417 SIRT1Q96EB6 747 aa32.66■■■□□ 2.82
GFRA4-201ENST00000290417 PHLPP1O60346 1717 aa32.66■■■□□ 2.82
GFRA4-201ENST00000290417 KIAA1210Q9ULL0 1709 aa32.65■■■□□ 2.82
GFRA4-201ENST00000290417 DLC1Q96QB1 1528 aa32.63■■■□□ 2.81
GFRA4-201ENST00000290417 CDC42BPGQ6DT37 1551 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms