RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 NESP48681 1621 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 TEX35Q5T0J7 233 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 ZNF771Q7L3S4 317 aaPredicted RBP21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 DIAPH3Q9NSV4 1193 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 APBB1O00213 710 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 APAF1O14727 1248 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 ARID3AQ99856 593 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 CCDC173Q0VFZ6 552 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 GPATCH3Q96I76 525 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
PCDHA13-201ENST00000289272 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
PCDHA13-201ENST00000289272 AMPHP49418 695 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 REC8O95072 547 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 MAP3K1Q13233 1512 aa21.48■■□□□ 1.03
PCDHA13-201ENST00000289272 CCDC66A2RUB6 948 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 TROQ12816 1431 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 NAIPQ13075 1403 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 AMER1Q5JTC6 1135 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 NASPP49321 788 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 GNL2Q13823 731 aaKnown RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 LETM1O95202 739 aaPredicted RBP21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 GOLGA6L19H0YKK7 550 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 DAPK1P53355 1430 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 COG3Q96JB2 828 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 C22orf23Q9BZE7 217 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 TRAK2O60296 914 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 C9orf84Q5VXU9 1444 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 ROCK1Q13464 1354 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 ARGLU1Q9NWB6 273 aaPredicted RBP21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 ARHGAP5Q13017 1502 aa21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 MBD3O95983 291 aa21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 A0A0U1RQG5 324 aaPredicted RBP21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 TAF3Q5VWG9 929 aa21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
PCDHA13-201ENST00000289272 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 TMX4Q9H1E5 349 aaPredicted RBP21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
PCDHA13-201ENST00000289272 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
PCDHA13-201ENST00000289272 TRIM6-TRIM34B2RNG4 842 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 SLC4A10Q6U841 1118 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CIZ1Q9ULV3 898 aaPredicted RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CWC15Q9P013 229 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CUL7Q14999 1698 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 DZIP1LQ8IYY4 767 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 UBE2Q2Q8WVN8 375 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 R3HCC1Q9Y3T6 440 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 BECN2A8MW95 431 aa21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 ACBD3Q9H3P7 528 aa21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1
PCDHA13-201ENST00000289272 CCDC70Q6NSX1 233 aa21.33■■□□□ 1
PCDHA13-201ENST00000289272 PDE3AQ14432 1141 aa21.32■■□□□ 1
PCDHA13-201ENST00000289272 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
PCDHA13-201ENST00000289272 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
PCDHA13-201ENST00000289272 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
PCDHA13-201ENST00000289272 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 PPP2R1AP30153 589 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 MCM2P49736 904 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
PCDHA13-201ENST00000289272 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
PCDHA13-201ENST00000289272 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms