RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 WRNQ14191 1432 aaPredicted RBP eCLIP4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 SEPT12Q8IYM1 358 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 RAPGEF4Q8WZA2 1011 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 ABTB2Q8N961 1025 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 TTC5Q8N0Z6 440 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 PRG4Q92954 1404 aaPredicted RBP4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 APLP1P51693 650 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 EIF6P56537 245 aaKnown RBP4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 C1orf141Q5JVX7 400 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 CHADLQ6NUI6 762 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 CNGA1P29973 690 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 ZNF428Q96B54 188 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 CABP1Q9NZU7 370 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 USP19O94966 1318 aa4.78□□□□□ -1.64
SEMA3D-201ENST00000284136 MTUS2Q5JR59 1369 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 MPRIPQ6WCQ1 1025 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 KAT6BQ8WYB5 2073 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 TCEAL9Q9UHQ7 104 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 DHX57Q6P158 1386 aaKnown RBP4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 DDB1Q16531 1140 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 BTG4Q9NY30 223 aa4.77□□□□□ -1.65
SEMA3D-201ENST00000284136 HMGB2P26583 209 aaKnown RBP4.76□□□□□ -1.65
SEMA3D-201ENST00000284136 MRC2Q9UBG0 1479 aa4.76□□□□□ -1.65
SEMA3D-201ENST00000284136 CCDC157Q569K6 752 aa4.76□□□□□ -1.65
SEMA3D-201ENST00000284136 PKD2Q13563 968 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 EZH2Q15910 746 aaKnown RBP4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 UPF1Q92900 1129 aaKnown RBP eCLIP4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 GCC1Q96CN9 775 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 MAP10Q9P2G4 905 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 KDM5CP41229 1560 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 RBM25P49756 843 aaKnown RBP4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 CCDC87Q9NVE4 849 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 NOL10Q9BSC4 688 aaKnown RBP4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 ZMYND15Q9H091 742 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 CLSPNQ9HAW4 1339 aa4.75□□□□□ -1.65
SEMA3D-201ENST00000284136 CD109Q6YHK3 1445 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 NBPF1Q3BBV0 1214 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 SLAIN2Q9P270 581 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 IKQ13123 557 aaPredicted RBP4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 RPGRQ92834 1020 aaKnown RBP4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 ADGRL1O94910 1474 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 GAPVD1Q14C86 1478 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 ZNF316A6NFI3 1004 aaPredicted RBP4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 HTRA3P83110 453 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 ECE1P42892 770 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 FANCD2Q9BXW9 1451 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 AFAP1Q8N556 730 aa4.74□□□□□ -1.65
SEMA3D-201ENST00000284136 KCNQ2O43526 872 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 KDM4AO75164 1064 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 CLIP1P30622 1438 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 U2SURPO15042 1029 aaKnown RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 FMNL1O95466 1100 aaPredicted RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 PRKCSHP14314 528 aaPredicted RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 CTCFP49711 727 aaPredicted RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 POTEAQ6S8J7 498 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 FAM122AQ96E09 287 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 NR2E3Q9Y5X4 410 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 MAP3K13O43283 966 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 CDK11BP21127 795 aaKnown RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 OS9Q13438 667 aaPredicted RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 SPOUT1Q5T280 376 aaKnown RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 PLIN1O60240 522 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 HSPA1AP0DMV8 641 aaKnown RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 HSPA1BP0DMV9 641 aaKnown RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 NLRP6P59044 892 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 MAPK8IP2Q13387 824 aaPredicted RBP4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 OTUD7BQ6GQQ9 843 aa4.73□□□□□ -1.65
SEMA3D-201ENST00000284136 SMC1BQ8NDV3 1235 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 NACADO15069 1562 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 KDM6BO15054 1643 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 FYB1O15117 783 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 LBX1P52954 281 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 GORABQ5T7V8 394 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 FAM196AQ6ZSG2 479 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 KRT28Q7Z3Y7 464 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 FHDC1Q9C0D6 1143 aaPredicted RBP4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 PAF1Q8N7H5 531 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 ZBBXA8MT70 800 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 TFRCP02786 760 aaKnown RBP4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 AKNAQ7Z591 1439 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 SPATA31D1Q6ZQQ2 1576 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 NBPF11Q86T75 865 aa4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 DCPSQ96C86 337 aaKnown RBP4.72□□□□□ -1.65
SEMA3D-201ENST00000284136 MTMR7Q9Y216 660 aa4.71□□□□□ -1.65
SEMA3D-201ENST00000284136 C6orf229H3BNL8 230 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 ATP2B2Q01814 1243 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 HDGFL2Q7Z4V5 671 aaPredicted RBP4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 CCNL1Q9UK58 526 aaPredicted RBP4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 LPXNO60711 386 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 ST5P78524 1137 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 TMEM132AQ24JP5 1023 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 ERFEQ4G0M1 354 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 TTC30AQ86WT1 665 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 VEZTQ9HBM0 779 aa4.71□□□□□ -1.66
SEMA3D-201ENST00000284136 TMOD2Q9NZR1 351 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms