RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 LNPKQ9C0E8 428 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 ANTXR1Q9H6X2 564 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 TTC12Q9H892 705 aaPredicted RBP9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 USP47Q96K76 1375 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 TNNT1P13805 278 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 GPATCH11Q8N954 259 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 TOMM22Q9NS69 142 aa9.58□□□□□ -0.88
SPOCK1-201ENST00000282223 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
SPOCK1-201ENST00000282223 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
SPOCK1-201ENST00000282223 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
SPOCK1-201ENST00000282223 UTP14CQ5TAP6 766 aaKnown RBP9.57□□□□□ -0.88
SPOCK1-201ENST00000282223 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
SPOCK1-201ENST00000282223 ZNF526Q8TF50 670 aaPredicted RBP9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 TIGD1Q96MW7 591 aa9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 RBSNQ9H1K0 784 aa9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 NOL7Q9UMY1 257 aaKnown RBP9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 SECISBP2LQ93073 1101 aaKnown RBP9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 DIAPH3Q9NSV4 1193 aa9.56□□□□□ -0.88
SPOCK1-201ENST00000282223 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
SPOCK1-201ENST00000282223 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
SPOCK1-201ENST00000282223 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
SPOCK1-201ENST00000282223 DNAJC2Q99543 621 aaKnown RBP9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 USP25Q9UHP3 1055 aa9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 GTF2F1P35269 517 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 SKIDA1Q1XH10 827 aa9.54□□□□□ -0.88
SPOCK1-201ENST00000282223 ZSCAN23Q3MJ62 389 aa9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 V9GYY5 206 aaPredicted RBP9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 USP19O94966 1318 aa9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 BRD4O60885 1362 aaPredicted RBP9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 BAG4O95429 457 aaKnown RBP9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
SPOCK1-201ENST00000282223 TERF1P54274 439 aa9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 PKD2Q13563 968 aa9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
SPOCK1-201ENST00000282223 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 MYRIPQ8NFW9 859 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 UACAQ9BZF9 1416 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 DUSP27Q5VZP5 1158 aa9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 RTF1Q92541 710 aaKnown RBP9.51□□□□□ -0.89
SPOCK1-201ENST00000282223 GOLGA6L6A8MZA4 724 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 TNNQ9UQP3 1299 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 C16orf45Q96MC5 204 aaPredicted RBP9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 CALCOCO1Q9P1Z2 691 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 POLR3GO15318 223 aaPredicted RBP9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
SPOCK1-201ENST00000282223 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
SPOCK1-201ENST00000282223 TSPY26PQ9H489 355 aa9.49□□□□□ -0.89
SPOCK1-201ENST00000282223 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
SPOCK1-201ENST00000282223 MAP3K1Q13233 1512 aa9.49□□□□□ -0.89
SPOCK1-201ENST00000282223 ZNF500O60304 480 aaPredicted RBP9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 NUCB2P80303 420 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 C10orf67Q8IYJ2 551 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 SMC4Q9NTJ3 1288 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 RIOK3O14730 519 aaKnown RBP9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 GTF2A1P52655 376 aaPredicted RBP9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
SPOCK1-201ENST00000282223 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
SPOCK1-201ENST00000282223 CCDC112Q8NEF3 446 aa9.47□□□□□ -0.89
SPOCK1-201ENST00000282223 TPD52L1Q16890 204 aaPredicted RBP9.46□□□□□ -0.89
SPOCK1-201ENST00000282223 RSPH14Q9UHP6 348 aa9.46□□□□□ -0.89
SPOCK1-201ENST00000282223 BRD2P25440 801 aaKnown RBP9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 MCM5P33992 734 aa9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 RAB3GAP1Q15042 981 aa9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 GORABQ5T7V8 394 aa9.46□□□□□ -0.9
SPOCK1-201ENST00000282223 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 ADCY5O95622 1261 aa9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 SENP3Q9H4L4 574 aaPredicted RBP9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 ROCK2O75116 1388 aaKnown RBP9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 HS1BP3Q53T59 392 aa9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
SPOCK1-201ENST00000282223 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
SPOCK1-201ENST00000282223 HCLS1P14317 486 aaPredicted RBP9.44□□□□□ -0.9
SPOCK1-201ENST00000282223 SLFN5Q08AF3 891 aa9.44□□□□□ -0.9
SPOCK1-201ENST00000282223 NAA30Q147X3 362 aaPredicted RBP9.44□□□□□ -0.9
SPOCK1-201ENST00000282223 ST18O60284 1047 aa9.44□□□□□ -0.9
SPOCK1-201ENST00000282223 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms