RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
CHEK1-201ENST00000278916 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
CHEK1-201ENST00000278916 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
CHEK1-201ENST00000278916 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
CHEK1-201ENST00000278916 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
CHEK1-201ENST00000278916 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
CHEK1-201ENST00000278916 BCANQ96GW7 911 aa17.27■□□□□ 0.36
CHEK1-201ENST00000278916 IQGAP1P46940 1657 aa17.27■□□□□ 0.36
CHEK1-201ENST00000278916 SPATA31E1Q6ZUB1 1445 aa17.26■□□□□ 0.35
CHEK1-201ENST00000278916 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
CHEK1-201ENST00000278916 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
CHEK1-201ENST00000278916 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
CHEK1-201ENST00000278916 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
CHEK1-201ENST00000278916 MED14O60244 1454 aa17.24■□□□□ 0.35
CHEK1-201ENST00000278916 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
CHEK1-201ENST00000278916 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
CHEK1-201ENST00000278916 PPLO60437 1756 aa17.21■□□□□ 0.35
CHEK1-201ENST00000278916 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHEK1-201ENST00000278916 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
CHEK1-201ENST00000278916 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
CHEK1-201ENST00000278916 ADGRF5Q8IZF2 1346 aa17.18■□□□□ 0.34
CHEK1-201ENST00000278916 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
CHEK1-201ENST00000278916 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
CHEK1-201ENST00000278916 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
CHEK1-201ENST00000278916 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
CHEK1-201ENST00000278916 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
CHEK1-201ENST00000278916 STRCP1A6NGW2 1772 aa17.15■□□□□ 0.34
CHEK1-201ENST00000278916 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
CHEK1-201ENST00000278916 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
CHEK1-201ENST00000278916 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
CHEK1-201ENST00000278916 SETBP1Q9Y6X0 1596 aa17.12■□□□□ 0.33
CHEK1-201ENST00000278916 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
CHEK1-201ENST00000278916 METP08581 1390 aa17.11■□□□□ 0.33
CHEK1-201ENST00000278916 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
CHEK1-201ENST00000278916 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
CHEK1-201ENST00000278916 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
CHEK1-201ENST00000278916 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
CHEK1-201ENST00000278916 PIK3C2GO75747 1445 aa17.08■□□□□ 0.33
CHEK1-201ENST00000278916 PTPRUQ92729 1446 aa17.08■□□□□ 0.33
CHEK1-201ENST00000278916 SETD1AO15047 1707 aaKnown RBP17.07■□□□□ 0.32
CHEK1-201ENST00000278916 MYOM2P54296 1465 aa17.07■□□□□ 0.32
CHEK1-201ENST00000278916 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
CHEK1-201ENST00000278916 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
CHEK1-201ENST00000278916 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
CHEK1-201ENST00000278916 KCNA6P17658 529 aa17.06■□□□□ 0.32
CHEK1-201ENST00000278916 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
CHEK1-201ENST00000278916 CHD2O14647 1828 aaKnown RBP17.06■□□□□ 0.32
CHEK1-201ENST00000278916 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
CHEK1-201ENST00000278916 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
CHEK1-201ENST00000278916 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
CHEK1-201ENST00000278916 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
CHEK1-201ENST00000278916 STK26Q9P289 416 aa17.03■□□□□ 0.32
CHEK1-201ENST00000278916 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
CHEK1-201ENST00000278916 CPS1P31327 1500 aa17.02■□□□□ 0.32
CHEK1-201ENST00000278916 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
CHEK1-201ENST00000278916 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
CHEK1-201ENST00000278916 C14orf93Q9H972 538 aaKnown RBP17.01■□□□□ 0.31
CHEK1-201ENST00000278916 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
CHEK1-201ENST00000278916 TMEM94Q12767 1356 aa17■□□□□ 0.31
CHEK1-201ENST00000278916 XIRP1Q702N8 1843 aaKnown RBP16.99■□□□□ 0.31
CHEK1-201ENST00000278916 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
CHEK1-201ENST00000278916 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
CHEK1-201ENST00000278916 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
CHEK1-201ENST00000278916 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
CHEK1-201ENST00000278916 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
CHEK1-201ENST00000278916 LAMC1P11047 1609 aa16.96■□□□□ 0.31
CHEK1-201ENST00000278916 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
CHEK1-201ENST00000278916 C14orf37Q86TY3 774 aa16.96■□□□□ 0.3
CHEK1-201ENST00000278916 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
CHEK1-201ENST00000278916 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
CHEK1-201ENST00000278916 WAPLQ7Z5K2 1190 aa16.94■□□□□ 0.3
CHEK1-201ENST00000278916 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
CHEK1-201ENST00000278916 SAFB2Q14151 953 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHEK1-201ENST00000278916 STAC3Q96MF2 364 aa16.93■□□□□ 0.3
CHEK1-201ENST00000278916 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
CHEK1-201ENST00000278916 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
CHEK1-201ENST00000278916 PLEKHH1Q9ULM0 1364 aa16.93■□□□□ 0.3
CHEK1-201ENST00000278916 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
CHEK1-201ENST00000278916 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
CHEK1-201ENST00000278916 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
CHEK1-201ENST00000278916 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
CHEK1-201ENST00000278916 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
CHEK1-201ENST00000278916 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
CHEK1-201ENST00000278916 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
CHEK1-201ENST00000278916 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
CHEK1-201ENST00000278916 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
CHEK1-201ENST00000278916 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
CHEK1-201ENST00000278916 IQSEC2Q5JU85 1478 aa16.88■□□□□ 0.29
CHEK1-201ENST00000278916 TECPR2O15040 1411 aa16.88■□□□□ 0.29
CHEK1-201ENST00000278916 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
CHEK1-201ENST00000278916 MSH6P52701 1360 aa16.87■□□□□ 0.29
CHEK1-201ENST00000278916 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.87■□□□□ 0.29
CHEK1-201ENST00000278916 POGKQ9P215 609 aa16.85■□□□□ 0.29
CHEK1-201ENST00000278916 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
CHEK1-201ENST00000278916 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
CHEK1-201ENST00000278916 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
CHEK1-201ENST00000278916 FBXO41Q8TF61 875 aa16.84■□□□□ 0.29
CHEK1-201ENST00000278916 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
CHEK1-201ENST00000278916 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
CHEK1-201ENST00000278916 TOM1O60784 492 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms