RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
CRIP3-201ENST00000274990 FBXO41Q8TF61 875 aa14□□□□□ -0.17
CRIP3-201ENST00000274990 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
CRIP3-201ENST00000274990 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
CRIP3-201ENST00000274990 MPHOSPH9Q99550 1183 aa13.99□□□□□ -0.17
CRIP3-201ENST00000274990 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
CRIP3-201ENST00000274990 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
CRIP3-201ENST00000274990 ZNF326Q5BKZ1 582 aaKnown RBP13.97□□□□□ -0.17
CRIP3-201ENST00000274990 TRPM2O94759 1503 aa13.96□□□□□ -0.17
CRIP3-201ENST00000274990 KIF1BO60333 1816 aa13.94□□□□□ -0.18
CRIP3-201ENST00000274990 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
CRIP3-201ENST00000274990 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
CRIP3-201ENST00000274990 RGL3Q3MIN7 710 aa13.91□□□□□ -0.18
CRIP3-201ENST00000274990 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
CRIP3-201ENST00000274990 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
CRIP3-201ENST00000274990 CPS1P31327 1500 aa13.9□□□□□ -0.19
CRIP3-201ENST00000274990 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.19
CRIP3-201ENST00000274990 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.19
CRIP3-201ENST00000274990 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
CRIP3-201ENST00000274990 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
CRIP3-201ENST00000274990 NRXN3Q9Y4C0 1643 aa13.89□□□□□ -0.19
CRIP3-201ENST00000274990 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
CRIP3-201ENST00000274990 ALKQ9UM73 1620 aa13.86□□□□□ -0.19
CRIP3-201ENST00000274990 KCNA6P17658 529 aa13.86□□□□□ -0.19
CRIP3-201ENST00000274990 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
CRIP3-201ENST00000274990 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
CRIP3-201ENST00000274990 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
CRIP3-201ENST00000274990 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
CRIP3-201ENST00000274990 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
CRIP3-201ENST00000274990 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
CRIP3-201ENST00000274990 PPLO60437 1756 aa13.84□□□□□ -0.19
CRIP3-201ENST00000274990 IQSEC2Q5JU85 1478 aa13.84□□□□□ -0.19
CRIP3-201ENST00000274990 METP08581 1390 aa13.83□□□□□ -0.19
CRIP3-201ENST00000274990 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
CRIP3-201ENST00000274990 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CRIP3-201ENST00000274990 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
CRIP3-201ENST00000274990 SPATA31E1Q6ZUB1 1445 aa13.82□□□□□ -0.2
CRIP3-201ENST00000274990 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
CRIP3-201ENST00000274990 AMOTL2Q9Y2J4 779 aa13.81□□□□□ -0.2
CRIP3-201ENST00000274990 ANKRD30BQ9BXX2 1392 aa13.8□□□□□ -0.2
CRIP3-201ENST00000274990 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
CRIP3-201ENST00000274990 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
CRIP3-201ENST00000274990 TOM1O60784 492 aa13.78□□□□□ -0.2
CRIP3-201ENST00000274990 HSPA1LP34931 641 aa13.78□□□□□ -0.2
CRIP3-201ENST00000274990 DIP2AQ14689 1571 aa13.78□□□□□ -0.2
CRIP3-201ENST00000274990 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
CRIP3-201ENST00000274990 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
CRIP3-201ENST00000274990 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
CRIP3-201ENST00000274990 NKTRP30414 1462 aaKnown RBP13.76□□□□□ -0.21
CRIP3-201ENST00000274990 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
CRIP3-201ENST00000274990 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
CRIP3-201ENST00000274990 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
CRIP3-201ENST00000274990 HRCP23327 699 aa13.75□□□□□ -0.21
CRIP3-201ENST00000274990 STK26Q9P289 416 aa13.75□□□□□ -0.21
CRIP3-201ENST00000274990 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
CRIP3-201ENST00000274990 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
CRIP3-201ENST00000274990 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
CRIP3-201ENST00000274990 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
CRIP3-201ENST00000274990 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
CRIP3-201ENST00000274990 MSH6P52701 1360 aa13.71□□□□□ -0.21
CRIP3-201ENST00000274990 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
CRIP3-201ENST00000274990 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
CRIP3-201ENST00000274990 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.21
CRIP3-201ENST00000274990 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
CRIP3-201ENST00000274990 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
CRIP3-201ENST00000274990 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
CRIP3-201ENST00000274990 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
CRIP3-201ENST00000274990 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
CRIP3-201ENST00000274990 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
CRIP3-201ENST00000274990 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
CRIP3-201ENST00000274990 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
CRIP3-201ENST00000274990 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
CRIP3-201ENST00000274990 ATF3P18847 181 aa13.66□□□□□ -0.22
CRIP3-201ENST00000274990 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
CRIP3-201ENST00000274990 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
CRIP3-201ENST00000274990 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
CRIP3-201ENST00000274990 MYOM2P54296 1465 aa13.66□□□□□ -0.22
CRIP3-201ENST00000274990 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
CRIP3-201ENST00000274990 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
CRIP3-201ENST00000274990 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
CRIP3-201ENST00000274990 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
CRIP3-201ENST00000274990 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
CRIP3-201ENST00000274990 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
CRIP3-201ENST00000274990 PCGF6Q9BYE7 350 aa13.63□□□□□ -0.23
CRIP3-201ENST00000274990 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
CRIP3-201ENST00000274990 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
CRIP3-201ENST00000274990 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
CRIP3-201ENST00000274990 MST1RQ04912 1400 aa13.62□□□□□ -0.23
CRIP3-201ENST00000274990 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
CRIP3-201ENST00000274990 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
CRIP3-201ENST00000274990 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
CRIP3-201ENST00000274990 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
CRIP3-201ENST00000274990 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
CRIP3-201ENST00000274990 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
CRIP3-201ENST00000274990 L3MBTL2Q969R5 705 aa13.6□□□□□ -0.23
CRIP3-201ENST00000274990 ADGRB1O14514 1584 aa13.59□□□□□ -0.23
CRIP3-201ENST00000274990 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
CRIP3-201ENST00000274990 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
CRIP3-201ENST00000274990 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
CRIP3-201ENST00000274990 ABCC11Q96J66 1382 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms