RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 SLIT1O75093 1534 aa33.37■■■□□ 2.93
C1orf35-201ENST00000272139 IQGAP1P46940 1657 aa33.35■■■□□ 2.93
C1orf35-201ENST00000272139 ARHGAP23Q9P227 1491 aa33.35■■■□□ 2.93
C1orf35-201ENST00000272139 SCAF11Q99590 1463 aaKnown RBP33.33■■■□□ 2.93
C1orf35-201ENST00000272139 CCER1Q8TC90 406 aaPredicted RBP33.31■■■□□ 2.92
C1orf35-201ENST00000272139 ZNF326Q5BKZ1 582 aaKnown RBP33.3■■■□□ 2.92
C1orf35-201ENST00000272139 EID1Q9Y6B2 187 aa33.3■■■□□ 2.92
C1orf35-201ENST00000272139 TMEM2Q9UHN6 1383 aa33.29■■■□□ 2.92
C1orf35-201ENST00000272139 TXNDC2Q86VQ3 553 aa33.27■■■□□ 2.92
C1orf35-201ENST00000272139 SIN3AQ96ST3 1273 aa33.27■■■□□ 2.92
C1orf35-201ENST00000272139 CPS1P31327 1500 aa33.27■■■□□ 2.92
C1orf35-201ENST00000272139 RGL3Q3MIN7 710 aa33.26■■■□□ 2.91
C1orf35-201ENST00000272139 HDGFP51858 240 aaKnown RBP33.24■■■□□ 2.91
C1orf35-201ENST00000272139 NEUROD1Q13562 356 aa33.24■■■□□ 2.91
C1orf35-201ENST00000272139 SPATA31E1Q6ZUB1 1445 aa33.23■■■□□ 2.91
C1orf35-201ENST00000272139 LTKP29376 864 aa33.23■■■□□ 2.91
C1orf35-201ENST00000272139 CLSPNQ9HAW4 1339 aa33.23■■■□□ 2.91
C1orf35-201ENST00000272139 RIMS2Q9UQ26 1411 aa33.19■■■□□ 2.9
C1orf35-201ENST00000272139 RPGRIP1LQ68CZ1 1315 aa33.18■■■□□ 2.9
C1orf35-201ENST00000272139 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.18■■■□□ 2.9
C1orf35-201ENST00000272139 ZFYVE9O95405 1425 aa33.14■■■□□ 2.9
C1orf35-201ENST00000272139 PPP1R15AO75807 674 aaPredicted RBP33.14■■■□□ 2.9
C1orf35-201ENST00000272139 NUTM2DQ5VT03 806 aaPredicted RBP33.13■■■□□ 2.89
C1orf35-201ENST00000272139 PPLO60437 1756 aa33.12■■■□□ 2.89
C1orf35-201ENST00000272139 NEXMIFQ5QGS0 1516 aa33.12■■■□□ 2.89
C1orf35-201ENST00000272139 VGFO15240 615 aaPredicted RBP33.1■■■□□ 2.89
C1orf35-201ENST00000272139 IFT172Q9UG01 1749 aa33.08■■■□□ 2.89
C1orf35-201ENST00000272139 UBAP1LF5GYI3 381 aa33.06■■■□□ 2.88
C1orf35-201ENST00000272139 DCAF11Q8TEB1 546 aa33.06■■■□□ 2.88
C1orf35-201ENST00000272139 BCANQ96GW7 911 aa33.04■■■□□ 2.88
C1orf35-201ENST00000272139 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
C1orf35-201ENST00000272139 STRCP1A6NGW2 1772 aa33.03■■■□□ 2.88
C1orf35-201ENST00000272139 STAC3Q96MF2 364 aa33.02■■■□□ 2.88
C1orf35-201ENST00000272139 TONSLQ96HA7 1378 aa33.01■■■□□ 2.88
C1orf35-201ENST00000272139 L3MBTL2Q969R5 705 aa33.01■■■□□ 2.87
C1orf35-201ENST00000272139 SENP3Q9H4L4 574 aaPredicted RBP33.01■■■□□ 2.87
C1orf35-201ENST00000272139 PLEKHG1Q9ULL1 1385 aa33■■■□□ 2.87
C1orf35-201ENST00000272139 LRRC7Q96NW7 1537 aa32.99■■■□□ 2.87
C1orf35-201ENST00000272139 ADGRF5Q8IZF2 1346 aa32.97■■■□□ 2.87
C1orf35-201ENST00000272139 TOM1O60784 492 aa32.96■■■□□ 2.87
C1orf35-201ENST00000272139 SLC26A8Q96RN1 970 aa32.95■■■□□ 2.87
C1orf35-201ENST00000272139 MYOM2P54296 1465 aa32.95■■■□□ 2.86
C1orf35-201ENST00000272139 TIMELESSQ9UNS1 1208 aa32.91■■■□□ 2.86
C1orf35-201ENST00000272139 KCNA6P17658 529 aa32.9■■■□□ 2.86
C1orf35-201ENST00000272139 SETBP1Q9Y6X0 1596 aa32.89■■■□□ 2.86
C1orf35-201ENST00000272139 NRXN1Q9ULB1 1477 aa32.87■■■□□ 2.85
C1orf35-201ENST00000272139 TBX22Q9Y458 520 aa32.86■■■□□ 2.85
C1orf35-201ENST00000272139 NWD1Q149M9 1564 aa32.86■■■□□ 2.85
C1orf35-201ENST00000272139 NRXN3Q9Y4C0 1643 aa32.86■■■□□ 2.85
C1orf35-201ENST00000272139 PIK3C2GO75747 1445 aa32.85■■■□□ 2.85
C1orf35-201ENST00000272139 DIP2AQ14689 1571 aa32.85■■■□□ 2.85
C1orf35-201ENST00000272139 NKTRP30414 1462 aaKnown RBP32.85■■■□□ 2.85
C1orf35-201ENST00000272139 ADAMTS13Q76LX8 1427 aa32.85■■■□□ 2.85
C1orf35-201ENST00000272139 SCAF1Q9H7N4 1312 aaKnown RBP32.83■■■□□ 2.85
C1orf35-201ENST00000272139 ALKQ9UM73 1620 aa32.81■■■□□ 2.84
C1orf35-201ENST00000272139 PIP4K2BP78356 416 aa32.81■■■□□ 2.84
C1orf35-201ENST00000272139 C14orf93Q9H972 538 aaKnown RBP32.79■■■□□ 2.84
C1orf35-201ENST00000272139 PRAG1Q86YV5 1406 aa32.79■■■□□ 2.84
C1orf35-201ENST00000272139 CFAP70Q5T0N1 1121 aa32.78■■■□□ 2.84
C1orf35-201ENST00000272139 XIRP1Q702N8 1843 aaKnown RBP32.78■■■□□ 2.84
C1orf35-201ENST00000272139 TMEM94Q12767 1356 aa32.77■■■□□ 2.84
C1orf35-201ENST00000272139 PIK3R4Q99570 1358 aa32.77■■■□□ 2.84
C1orf35-201ENST00000272139 CHD2O14647 1828 aaKnown RBP32.77■■■□□ 2.84
C1orf35-201ENST00000272139 PROSER2Q86WR7 435 aaPredicted RBP32.77■■■□□ 2.84
C1orf35-201ENST00000272139 LAMC1P11047 1609 aa32.76■■■□□ 2.84
C1orf35-201ENST00000272139 SETD1AO15047 1707 aaKnown RBP32.76■■■□□ 2.83
C1orf35-201ENST00000272139 METP08581 1390 aa32.72■■■□□ 2.83
C1orf35-201ENST00000272139 KIAA1210Q9ULL0 1709 aa32.71■■■□□ 2.83
C1orf35-201ENST00000272139 NBPF8Q3BBV2 869 aa32.7■■■□□ 2.83
C1orf35-201ENST00000272139 TMEM132EQ6IEE7 984 aa32.69■■■□□ 2.82
C1orf35-201ENST00000272139 AMOTL2Q9Y2J4 779 aa32.66■■■□□ 2.82
C1orf35-201ENST00000272139 TRPM1Q7Z4N2 1603 aa32.65■■■□□ 2.82
C1orf35-201ENST00000272139 HSPA1LP34931 641 aa32.64■■■□□ 2.82
C1orf35-201ENST00000272139 MSH6P52701 1360 aa32.64■■■□□ 2.82
C1orf35-201ENST00000272139 NCOA3Q9Y6Q9 1424 aa32.64■■■□□ 2.82
C1orf35-201ENST00000272139 NBPF1Q3BBV0 1214 aa32.63■■■□□ 2.81
C1orf35-201ENST00000272139 PTPRUQ92729 1446 aa32.62■■■□□ 2.81
C1orf35-201ENST00000272139 RBM33Q96EV2 1170 aaKnown RBP32.61■■■□□ 2.81
C1orf35-201ENST00000272139 ASXL1Q8IXJ9 1541 aa32.61■■■□□ 2.81
C1orf35-201ENST00000272139 STK26Q9P289 416 aa32.6■■■□□ 2.81
C1orf35-201ENST00000272139 ADGRB1O14514 1584 aa32.59■■■□□ 2.81
C1orf35-201ENST00000272139 YTHDC2Q9H6S0 1430 aaKnown RBP32.58■■■□□ 2.81
C1orf35-201ENST00000272139 ROCK2O75116 1388 aaKnown RBP32.57■■■□□ 2.8
C1orf35-201ENST00000272139 LRPPRCP42704 1394 aaKnown RBP32.57■■■□□ 2.8
C1orf35-201ENST00000272139 XRN1Q8IZH2 1706 aaKnown RBP32.56■■■□□ 2.8
C1orf35-201ENST00000272139 FAM135BQ49AJ0 1406 aa32.54■■■□□ 2.8
C1orf35-201ENST00000272139 ABCC11Q96J66 1382 aa32.54■■■□□ 2.8
C1orf35-201ENST00000272139 RALGAPBQ86X10 1494 aa32.54■■■□□ 2.8
C1orf35-201ENST00000272139 C14orf37Q86TY3 774 aa32.53■■■□□ 2.8
C1orf35-201ENST00000272139 TRAK1Q9UPV9 953 aa32.51■■■□□ 2.8
C1orf35-201ENST00000272139 DISP3Q9P2K9 1392 aa32.51■■■□□ 2.8
C1orf35-201ENST00000272139 KNDC1Q76NI1 1749 aa32.51■■■□□ 2.79
C1orf35-201ENST00000272139 CARD11Q9BXL7 1154 aa32.5■■■□□ 2.79
C1orf35-201ENST00000272139 TECPR2O15040 1411 aa32.48■■■□□ 2.79
C1orf35-201ENST00000272139 GPRASP1Q5JY77 1395 aa32.47■■■□□ 2.79
C1orf35-201ENST00000272139 C19orf44Q9H6X5 657 aa32.47■■■□□ 2.79
C1orf35-201ENST00000272139 PTCH1Q13635 1447 aa32.46■■■□□ 2.79
C1orf35-201ENST00000272139 SLAIN2Q9P270 581 aa32.46■■■□□ 2.79
C1orf35-201ENST00000272139 ROBO1Q9Y6N7 1651 aa32.46■■■□□ 2.79
C1orf35-201ENST00000272139 ROBO2Q9HCK4 1378 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms