RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 CERS3Q8IU89 383 aa10.61□□□□□ -0.71
ZIM3-201ENST00000269834 COG6Q9Y2V7 657 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 MS4A1P11836 297 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 PDE4CQ08493 712 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
ZIM3-201ENST00000269834 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
ZIM3-201ENST00000269834 GAPVD1Q14C86 1478 aa10.59□□□□□ -0.71
ZIM3-201ENST00000269834 KIAA1522Q9P206 1035 aaPredicted RBP10.59□□□□□ -0.71
ZIM3-201ENST00000269834 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
ZIM3-201ENST00000269834 KDM4AO75164 1064 aa10.58□□□□□ -0.72
ZIM3-201ENST00000269834 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
ZIM3-201ENST00000269834 PCMTD1Q96MG8 357 aaPredicted RBP10.58□□□□□ -0.72
ZIM3-201ENST00000269834 MIA2Q96PC5 1412 aa10.57□□□□□ -0.72
ZIM3-201ENST00000269834 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
ZIM3-201ENST00000269834 DENND4BO75064 1496 aaPredicted RBP10.57□□□□□ -0.72
ZIM3-201ENST00000269834 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
ZIM3-201ENST00000269834 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
ZIM3-201ENST00000269834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
ZIM3-201ENST00000269834 ERICH6BQ5W0A0 696 aa10.55□□□□□ -0.72
ZIM3-201ENST00000269834 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
ZIM3-201ENST00000269834 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
ZIM3-201ENST00000269834 POTEHQ6S545 545 aa10.55□□□□□ -0.72
ZIM3-201ENST00000269834 CNTLNQ9NXG0 1405 aa10.55□□□□□ -0.72
ZIM3-201ENST00000269834 RFX1P22670 979 aa10.54□□□□□ -0.72
ZIM3-201ENST00000269834 FECHP22830 423 aa10.54□□□□□ -0.72
ZIM3-201ENST00000269834 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
ZIM3-201ENST00000269834 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
ZIM3-201ENST00000269834 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
ZIM3-201ENST00000269834 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
ZIM3-201ENST00000269834 KDM6BO15054 1643 aa10.53□□□□□ -0.72
ZIM3-201ENST00000269834 CAPN15O75808 1086 aa10.53□□□□□ -0.72
ZIM3-201ENST00000269834 BRD1O95696 1058 aa10.53□□□□□ -0.72
ZIM3-201ENST00000269834 AMHR2Q16671 573 aa10.53□□□□□ -0.72
ZIM3-201ENST00000269834 DNMT1P26358 1616 aaKnown RBP10.53□□□□□ -0.72
ZIM3-201ENST00000269834 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
ZIM3-201ENST00000269834 SND1Q7KZF4 910 aaKnown RBP eCLIP10.53□□□□□ -0.72
ZIM3-201ENST00000269834 PROCA1Q8NCQ7 364 aaPredicted RBP10.53□□□□□ -0.72
ZIM3-201ENST00000269834 TRIM52Q96A61 297 aa10.53□□□□□ -0.72
ZIM3-201ENST00000269834 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
ZIM3-201ENST00000269834 POM121CA8CG34 1229 aa10.52□□□□□ -0.73
ZIM3-201ENST00000269834 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
ZIM3-201ENST00000269834 SKIV2LQ15477 1246 aaKnown RBP10.52□□□□□ -0.73
ZIM3-201ENST00000269834 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
ZIM3-201ENST00000269834 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
ZIM3-201ENST00000269834 KCNA1Q09470 495 aa10.51□□□□□ -0.73
ZIM3-201ENST00000269834 ROCK1Q13464 1354 aa10.51□□□□□ -0.73
ZIM3-201ENST00000269834 HIRIP3Q9BW71 556 aaPredicted RBP10.51□□□□□ -0.73
ZIM3-201ENST00000269834 MRRFQ96E11 262 aaKnown RBP10.5□□□□□ -0.73
ZIM3-201ENST00000269834 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
ZIM3-201ENST00000269834 ADGBQ8N7X0 1667 aa10.5□□□□□ -0.73
ZIM3-201ENST00000269834 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
ZIM3-201ENST00000269834 IRF6O14896 467 aa10.5□□□□□ -0.73
ZIM3-201ENST00000269834 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
ZIM3-201ENST00000269834 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
ZIM3-201ENST00000269834 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
ZIM3-201ENST00000269834 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
ZIM3-201ENST00000269834 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
ZIM3-201ENST00000269834 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
ZIM3-201ENST00000269834 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
ZIM3-201ENST00000269834 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
ZIM3-201ENST00000269834 EIF4G2P78344 907 aaKnown RBP eCLIP10.47□□□□□ -0.73
ZIM3-201ENST00000269834 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
ZIM3-201ENST00000269834 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.73
ZIM3-201ENST00000269834 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.73
ZIM3-201ENST00000269834 GLMNQ92990 594 aa10.46□□□□□ -0.73
ZIM3-201ENST00000269834 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
ZIM3-201ENST00000269834 ZBTB12Q9Y330 459 aaPredicted RBP10.46□□□□□ -0.73
ZIM3-201ENST00000269834 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
ZIM3-201ENST00000269834 CCDC7Q96M83 1385 aa10.46□□□□□ -0.74
ZIM3-201ENST00000269834 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.74
ZIM3-201ENST00000269834 MAP2K5Q13163 448 aa10.46□□□□□ -0.74
ZIM3-201ENST00000269834 CDK13Q14004 1512 aaKnown RBP10.45□□□□□ -0.74
ZIM3-201ENST00000269834 DDX27Q96GQ7 796 aaKnown RBP10.45□□□□□ -0.74
ZIM3-201ENST00000269834 DAPK1P53355 1430 aa10.45□□□□□ -0.74
ZIM3-201ENST00000269834 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
ZIM3-201ENST00000269834 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
ZIM3-201ENST00000269834 KIF14Q15058 1648 aa10.45□□□□□ -0.74
ZIM3-201ENST00000269834 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 ADGRL1O94910 1474 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 MAGI1Q96QZ7 1491 aaPredicted RBP10.44□□□□□ -0.74
ZIM3-201ENST00000269834 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 SPATA31E1Q6ZUB1 1445 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 SPATA32Q96LK8 384 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
ZIM3-201ENST00000269834 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
ZIM3-201ENST00000269834 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
ZIM3-201ENST00000269834 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
ZIM3-201ENST00000269834 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
ZIM3-201ENST00000269834 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
ZIM3-201ENST00000269834 MPHOSPH9Q99550 1183 aa10.42□□□□□ -0.74
ZIM3-201ENST00000269834 DPYSL4O14531 572 aa10.41□□□□□ -0.74
ZIM3-201ENST00000269834 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms