RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ZNF335Q9H4Z2 1342 aaPredicted RBP10.68□□□□□ -0.7
DEPDC1B-201ENST00000265036 BCANQ96GW7 911 aa10.67□□□□□ -0.7
DEPDC1B-201ENST00000265036 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
DEPDC1B-201ENST00000265036 RGL3Q3MIN7 710 aa10.67□□□□□ -0.7
DEPDC1B-201ENST00000265036 EID1Q9Y6B2 187 aa10.67□□□□□ -0.7
DEPDC1B-201ENST00000265036 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
DEPDC1B-201ENST00000265036 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
DEPDC1B-201ENST00000265036 NEXMIFQ5QGS0 1516 aa10.65□□□□□ -0.71
DEPDC1B-201ENST00000265036 MED14O60244 1454 aa10.64□□□□□ -0.71
DEPDC1B-201ENST00000265036 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
DEPDC1B-201ENST00000265036 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
DEPDC1B-201ENST00000265036 HRCP23327 699 aa10.63□□□□□ -0.71
DEPDC1B-201ENST00000265036 PPLO60437 1756 aa10.63□□□□□ -0.71
DEPDC1B-201ENST00000265036 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
DEPDC1B-201ENST00000265036 SPATA31E1Q6ZUB1 1445 aa10.62□□□□□ -0.71
DEPDC1B-201ENST00000265036 NRXN3Q9Y4C0 1643 aa10.61□□□□□ -0.71
DEPDC1B-201ENST00000265036 ACIN1Q9UKV3 1341 aaKnown RBP10.61□□□□□ -0.71
DEPDC1B-201ENST00000265036 LTBP4Q8N2S1 1624 aa10.61□□□□□ -0.71
DEPDC1B-201ENST00000265036 IFT172Q9UG01 1749 aa10.6□□□□□ -0.71
DEPDC1B-201ENST00000265036 PLEKHG1Q9ULL1 1385 aa10.6□□□□□ -0.71
DEPDC1B-201ENST00000265036 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
DEPDC1B-201ENST00000265036 SIN3AQ96ST3 1273 aa10.59□□□□□ -0.71
DEPDC1B-201ENST00000265036 ADAMTS13Q76LX8 1427 aa10.59□□□□□ -0.71
DEPDC1B-201ENST00000265036 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
DEPDC1B-201ENST00000265036 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
DEPDC1B-201ENST00000265036 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
DEPDC1B-201ENST00000265036 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
DEPDC1B-201ENST00000265036 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
DEPDC1B-201ENST00000265036 SETBP1Q9Y6X0 1596 aa10.56□□□□□ -0.72
DEPDC1B-201ENST00000265036 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
DEPDC1B-201ENST00000265036 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-201ENST00000265036 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
DEPDC1B-201ENST00000265036 CHD2O14647 1828 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-201ENST00000265036 METP08581 1390 aa10.55□□□□□ -0.72
DEPDC1B-201ENST00000265036 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
DEPDC1B-201ENST00000265036 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
DEPDC1B-201ENST00000265036 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
DEPDC1B-201ENST00000265036 ALKQ9UM73 1620 aa10.54□□□□□ -0.72
DEPDC1B-201ENST00000265036 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
DEPDC1B-201ENST00000265036 KCNA6P17658 529 aa10.53□□□□□ -0.72
DEPDC1B-201ENST00000265036 LRRC7Q96NW7 1537 aa10.53□□□□□ -0.72
DEPDC1B-201ENST00000265036 RPGRIP1LQ68CZ1 1315 aa10.53□□□□□ -0.72
DEPDC1B-201ENST00000265036 CPS1P31327 1500 aa10.53□□□□□ -0.72
DEPDC1B-201ENST00000265036 NWD1Q149M9 1564 aa10.53□□□□□ -0.72
DEPDC1B-201ENST00000265036 PIK3C2GO75747 1445 aa10.52□□□□□ -0.72
DEPDC1B-201ENST00000265036 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.73
DEPDC1B-201ENST00000265036 TMEM132EQ6IEE7 984 aa10.52□□□□□ -0.73
DEPDC1B-201ENST00000265036 TBX22Q9Y458 520 aa10.51□□□□□ -0.73
DEPDC1B-201ENST00000265036 TMEM94Q12767 1356 aa10.51□□□□□ -0.73
DEPDC1B-201ENST00000265036 MYOM2P54296 1465 aa10.51□□□□□ -0.73
DEPDC1B-201ENST00000265036 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
DEPDC1B-201ENST00000265036 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
DEPDC1B-201ENST00000265036 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
DEPDC1B-201ENST00000265036 CFAP70Q5T0N1 1121 aa10.5□□□□□ -0.73
DEPDC1B-201ENST00000265036 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
DEPDC1B-201ENST00000265036 STK26Q9P289 416 aa10.5□□□□□ -0.73
DEPDC1B-201ENST00000265036 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
DEPDC1B-201ENST00000265036 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
DEPDC1B-201ENST00000265036 L3MBTL2Q969R5 705 aa10.49□□□□□ -0.73
DEPDC1B-201ENST00000265036 NRXN1Q9ULB1 1477 aa10.49□□□□□ -0.73
DEPDC1B-201ENST00000265036 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
DEPDC1B-201ENST00000265036 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
DEPDC1B-201ENST00000265036 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
DEPDC1B-201ENST00000265036 LAMC1P11047 1609 aa10.47□□□□□ -0.73
DEPDC1B-201ENST00000265036 ILDR1Q86SU0 546 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1B-201ENST00000265036 TONSLQ96HA7 1378 aa10.47□□□□□ -0.73
DEPDC1B-201ENST00000265036 PIK3R4Q99570 1358 aa10.47□□□□□ -0.73
DEPDC1B-201ENST00000265036 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
DEPDC1B-201ENST00000265036 NALCNQ8IZF0 1738 aa10.46□□□□□ -0.73
DEPDC1B-201ENST00000265036 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
DEPDC1B-201ENST00000265036 PRAG1Q86YV5 1406 aa10.45□□□□□ -0.74
DEPDC1B-201ENST00000265036 YTHDC2Q9H6S0 1430 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-201ENST00000265036 ADGRB1O14514 1584 aa10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 PLEKHH1Q9ULM0 1364 aa10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 C14orf93Q9H972 538 aaKnown RBP10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 FBXO41Q8TF61 875 aa10.44□□□□□ -0.74
DEPDC1B-201ENST00000265036 IQSEC2Q5JU85 1478 aa10.43□□□□□ -0.74
DEPDC1B-201ENST00000265036 MSH6P52701 1360 aa10.43□□□□□ -0.74
DEPDC1B-201ENST00000265036 TRAK1Q9UPV9 953 aa10.43□□□□□ -0.74
DEPDC1B-201ENST00000265036 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
DEPDC1B-201ENST00000265036 KNDC1Q76NI1 1749 aa10.43□□□□□ -0.74
DEPDC1B-201ENST00000265036 LRPPRCP42704 1394 aaKnown RBP10.42□□□□□ -0.74
DEPDC1B-201ENST00000265036 TRPM1Q7Z4N2 1603 aa10.42□□□□□ -0.74
DEPDC1B-201ENST00000265036 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
DEPDC1B-201ENST00000265036 NBPF8Q3BBV2 869 aa10.41□□□□□ -0.74
DEPDC1B-201ENST00000265036 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
DEPDC1B-201ENST00000265036 ARHGEF28Q8N1W1 1705 aaKnown RBP10.41□□□□□ -0.74
DEPDC1B-201ENST00000265036 TOM1O60784 492 aa10.41□□□□□ -0.74
DEPDC1B-201ENST00000265036 PRAM1Q96QH2 718 aa10.4□□□□□ -0.74
DEPDC1B-201ENST00000265036 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-201ENST00000265036 TECPR2O15040 1411 aa10.4□□□□□ -0.74
DEPDC1B-201ENST00000265036 ROBO1Q9Y6N7 1651 aa10.4□□□□□ -0.75
DEPDC1B-201ENST00000265036 KIAA1210Q9ULL0 1709 aa10.39□□□□□ -0.75
DEPDC1B-201ENST00000265036 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
DEPDC1B-201ENST00000265036 ATF3P18847 181 aa10.39□□□□□ -0.75
DEPDC1B-201ENST00000265036 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
DEPDC1B-201ENST00000265036 C19orf44Q9H6X5 657 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms