RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
PALB2-201ENST00000261584 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 EPRSP07814 1512 aaKnown RBP12.69□□□□□ -0.38
PALB2-201ENST00000261584 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
PALB2-201ENST00000261584 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
PALB2-201ENST00000261584 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
PALB2-201ENST00000261584 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
PALB2-201ENST00000261584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
PALB2-201ENST00000261584 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
PALB2-201ENST00000261584 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
PALB2-201ENST00000261584 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
PALB2-201ENST00000261584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.68□□□□□ -0.38
PALB2-201ENST00000261584 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
PALB2-201ENST00000261584 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
PALB2-201ENST00000261584 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
PALB2-201ENST00000261584 GBP4Q96PP9 640 aa12.67□□□□□ -0.38
PALB2-201ENST00000261584 RLBP1P12271 317 aa12.66□□□□□ -0.38
PALB2-201ENST00000261584 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
PALB2-201ENST00000261584 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
PALB2-201ENST00000261584 RIPK4P57078 832 aa12.66□□□□□ -0.38
PALB2-201ENST00000261584 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
PALB2-201ENST00000261584 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
PALB2-201ENST00000261584 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.38
PALB2-201ENST00000261584 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
PALB2-201ENST00000261584 MCM4P33991 863 aa12.64□□□□□ -0.39
PALB2-201ENST00000261584 KDM6BO15054 1643 aa12.64□□□□□ -0.39
PALB2-201ENST00000261584 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
PALB2-201ENST00000261584 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
PALB2-201ENST00000261584 NOB1Q9ULX3 412 aaKnown RBP12.64□□□□□ -0.39
PALB2-201ENST00000261584 EHBP1L1Q8N3D4 1523 aa12.64□□□□□ -0.39
PALB2-201ENST00000261584 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
PALB2-201ENST00000261584 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
PALB2-201ENST00000261584 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
PALB2-201ENST00000261584 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
PALB2-201ENST00000261584 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
PALB2-201ENST00000261584 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
PALB2-201ENST00000261584 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
PALB2-201ENST00000261584 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
PALB2-201ENST00000261584 SUPT6HQ7KZ85 1726 aaKnown RBP12.62□□□□□ -0.39
PALB2-201ENST00000261584 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
PALB2-201ENST00000261584 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
PALB2-201ENST00000261584 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
PALB2-201ENST00000261584 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
PALB2-201ENST00000261584 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
PALB2-201ENST00000261584 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
PALB2-201ENST00000261584 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
PALB2-201ENST00000261584 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
PALB2-201ENST00000261584 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
PALB2-201ENST00000261584 DTNBO60941 627 aa12.6□□□□□ -0.39
PALB2-201ENST00000261584 IPO8O15397 1037 aaKnown RBP12.6□□□□□ -0.39
PALB2-201ENST00000261584 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
PALB2-201ENST00000261584 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
PALB2-201ENST00000261584 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
PALB2-201ENST00000261584 TESK2Q96S53 571 aa12.59□□□□□ -0.39
PALB2-201ENST00000261584 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
PALB2-201ENST00000261584 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
PALB2-201ENST00000261584 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
PALB2-201ENST00000261584 PTPRGP23470 1445 aa12.58□□□□□ -0.4
PALB2-201ENST00000261584 DDX11L8A8MPP1 907 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 SNAPC4Q5SXM2 1469 aa12.57□□□□□ -0.4
PALB2-201ENST00000261584 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
PALB2-201ENST00000261584 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
PALB2-201ENST00000261584 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
PALB2-201ENST00000261584 NASPP49321 788 aaPredicted RBP12.56□□□□□ -0.4
PALB2-201ENST00000261584 ESPNB1AK53 854 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
PALB2-201ENST00000261584 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 ABCA10Q8WWZ4 1543 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
PALB2-201ENST00000261584 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 CAMSAP2Q08AD1 1489 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 SSFA2P28290 1259 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 MRE11P49959 708 aa12.55□□□□□ -0.4
PALB2-201ENST00000261584 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
PALB2-201ENST00000261584 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
PALB2-201ENST00000261584 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
PALB2-201ENST00000261584 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
PALB2-201ENST00000261584 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
PALB2-201ENST00000261584 ADGRF5Q8IZF2 1346 aa12.54□□□□□ -0.4
PALB2-201ENST00000261584 KANK1Q14678 1352 aa12.54□□□□□ -0.4
PALB2-201ENST00000261584 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
PALB2-201ENST00000261584 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
PALB2-201ENST00000261584 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
PALB2-201ENST00000261584 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
PALB2-201ENST00000261584 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 TRIM27P14373 513 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 KCNJ4P48050 445 aa12.53□□□□□ -0.4
PALB2-201ENST00000261584 TNPO1Q92973 898 aaKnown RBP12.53□□□□□ -0.4
PALB2-201ENST00000261584 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms