RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
SDCBP-201ENST00000260130 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
SDCBP-201ENST00000260130 CCDC144AA2RUR9 1427 aa24.65■■□□□ 1.54
SDCBP-201ENST00000260130 IQGAP1P46940 1657 aa24.63■■□□□ 1.53
SDCBP-201ENST00000260130 PPP1R15AO75807 674 aaPredicted RBP24.63■■□□□ 1.53
SDCBP-201ENST00000260130 NUTM2DQ5VT03 806 aaPredicted RBP24.61■■□□□ 1.53
SDCBP-201ENST00000260130 ZNF335Q9H4Z2 1342 aaPredicted RBP24.6■■□□□ 1.53
SDCBP-201ENST00000260130 KIF1BO60333 1816 aa24.59■■□□□ 1.53
SDCBP-201ENST00000260130 ANKRD30BQ9BXX2 1392 aa24.59■■□□□ 1.53
SDCBP-201ENST00000260130 BCANQ96GW7 911 aa24.59■■□□□ 1.53
SDCBP-201ENST00000260130 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.52
SDCBP-201ENST00000260130 SLC26A8Q96RN1 970 aa24.55■■□□□ 1.52
SDCBP-201ENST00000260130 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
SDCBP-201ENST00000260130 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
SDCBP-201ENST00000260130 LTBP4Q8N2S1 1624 aa24.53■■□□□ 1.52
SDCBP-201ENST00000260130 RGL3Q3MIN7 710 aa24.53■■□□□ 1.52
SDCBP-201ENST00000260130 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
SDCBP-201ENST00000260130 SPATA31E1Q6ZUB1 1445 aa24.53■■□□□ 1.52
SDCBP-201ENST00000260130 NEXMIFQ5QGS0 1516 aa24.52■■□□□ 1.52
SDCBP-201ENST00000260130 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
SDCBP-201ENST00000260130 TBX22Q9Y458 520 aa24.48■■□□□ 1.51
SDCBP-201ENST00000260130 ADAMTS13Q76LX8 1427 aa24.46■■□□□ 1.51
SDCBP-201ENST00000260130 CPS1P31327 1500 aa24.44■■□□□ 1.5
SDCBP-201ENST00000260130 KCNA6P17658 529 aa24.43■■□□□ 1.5
SDCBP-201ENST00000260130 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
SDCBP-201ENST00000260130 SETBP1Q9Y6X0 1596 aa24.41■■□□□ 1.5
SDCBP-201ENST00000260130 PPLO60437 1756 aa24.4■■□□□ 1.5
SDCBP-201ENST00000260130 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
SDCBP-201ENST00000260130 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.49
SDCBP-201ENST00000260130 STRCP1A6NGW2 1772 aa24.38■■□□□ 1.49
SDCBP-201ENST00000260130 PIK3R4Q99570 1358 aa24.38■■□□□ 1.49
SDCBP-201ENST00000260130 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
SDCBP-201ENST00000260130 IQSEC2Q5JU85 1478 aa24.37■■□□□ 1.49
SDCBP-201ENST00000260130 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
SDCBP-201ENST00000260130 IFT172Q9UG01 1749 aa24.34■■□□□ 1.49
SDCBP-201ENST00000260130 METP08581 1390 aa24.33■■□□□ 1.49
SDCBP-201ENST00000260130 FBXO41Q8TF61 875 aa24.33■■□□□ 1.48
SDCBP-201ENST00000260130 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
SDCBP-201ENST00000260130 NWD1Q149M9 1564 aa24.32■■□□□ 1.48
SDCBP-201ENST00000260130 PROSER2Q86WR7 435 aaPredicted RBP24.32■■□□□ 1.48
SDCBP-201ENST00000260130 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
SDCBP-201ENST00000260130 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
SDCBP-201ENST00000260130 CHD2O14647 1828 aaKnown RBP24.31■■□□□ 1.48
SDCBP-201ENST00000260130 STAC3Q96MF2 364 aa24.3■■□□□ 1.48
SDCBP-201ENST00000260130 PTPRUQ92729 1446 aa24.3■■□□□ 1.48
SDCBP-201ENST00000260130 ALKQ9UM73 1620 aa24.3■■□□□ 1.48
SDCBP-201ENST00000260130 NKTRP30414 1462 aaKnown RBP24.3■■□□□ 1.48
SDCBP-201ENST00000260130 MYOM2P54296 1465 aa24.3■■□□□ 1.48
SDCBP-201ENST00000260130 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
SDCBP-201ENST00000260130 PIK3C2GO75747 1445 aa24.29■■□□□ 1.48
SDCBP-201ENST00000260130 ZEB1P37275 1124 aaPredicted RBP24.28■■□□□ 1.48
SDCBP-201ENST00000260130 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
SDCBP-201ENST00000260130 NRXN1Q9ULB1 1477 aa24.27■■□□□ 1.48
SDCBP-201ENST00000260130 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
SDCBP-201ENST00000260130 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
SDCBP-201ENST00000260130 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
SDCBP-201ENST00000260130 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
SDCBP-201ENST00000260130 UBAP1LF5GYI3 381 aa24.24■■□□□ 1.47
SDCBP-201ENST00000260130 SETD1AO15047 1707 aaKnown RBP24.23■■□□□ 1.47
SDCBP-201ENST00000260130 CFAP70Q5T0N1 1121 aa24.22■■□□□ 1.47
SDCBP-201ENST00000260130 TOM1O60784 492 aa24.2■■□□□ 1.47
SDCBP-201ENST00000260130 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.46
SDCBP-201ENST00000260130 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
SDCBP-201ENST00000260130 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
SDCBP-201ENST00000260130 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
SDCBP-201ENST00000260130 XIRP1Q702N8 1843 aaKnown RBP24.18■■□□□ 1.46
SDCBP-201ENST00000260130 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
SDCBP-201ENST00000260130 STK26Q9P289 416 aa24.15■■□□□ 1.46
SDCBP-201ENST00000260130 LRPPRCP42704 1394 aaKnown RBP24.15■■□□□ 1.46
SDCBP-201ENST00000260130 MSH6P52701 1360 aa24.15■■□□□ 1.46
SDCBP-201ENST00000260130 LAMC1P11047 1609 aa24.14■■□□□ 1.45
SDCBP-201ENST00000260130 ASXL1Q8IXJ9 1541 aa24.14■■□□□ 1.45
SDCBP-201ENST00000260130 PRAG1Q86YV5 1406 aa24.14■■□□□ 1.45
SDCBP-201ENST00000260130 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
SDCBP-201ENST00000260130 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
SDCBP-201ENST00000260130 ABCC11Q96J66 1382 aa24.12■■□□□ 1.45
SDCBP-201ENST00000260130 C19orf44Q9H6X5 657 aa24.12■■□□□ 1.45
SDCBP-201ENST00000260130 YTHDC2Q9H6S0 1430 aaKnown RBP24.12■■□□□ 1.45
SDCBP-201ENST00000260130 PIP4K2BP78356 416 aa24.11■■□□□ 1.45
SDCBP-201ENST00000260130 TECPR2O15040 1411 aa24.1■■□□□ 1.45
SDCBP-201ENST00000260130 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
SDCBP-201ENST00000260130 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.45
SDCBP-201ENST00000260130 TONSLQ96HA7 1378 aa24.08■■□□□ 1.45
SDCBP-201ENST00000260130 ADGRB1O14514 1584 aa24.06■■□□□ 1.44
SDCBP-201ENST00000260130 SIRT1Q96EB6 747 aa24.06■■□□□ 1.44
SDCBP-201ENST00000260130 ATF3P18847 181 aa24.06■■□□□ 1.44
SDCBP-201ENST00000260130 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
SDCBP-201ENST00000260130 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
SDCBP-201ENST00000260130 ADGRL3Q9HAR2 1447 aa24.04■■□□□ 1.44
SDCBP-201ENST00000260130 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
SDCBP-201ENST00000260130 SLAIN2Q9P270 581 aa24.04■■□□□ 1.44
SDCBP-201ENST00000260130 FAM135BQ49AJ0 1406 aa24.02■■□□□ 1.44
SDCBP-201ENST00000260130 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.02■■□□□ 1.44
SDCBP-201ENST00000260130 DCCP43146 1447 aa24.02■■□□□ 1.44
SDCBP-201ENST00000260130 NBPF1Q3BBV0 1214 aa24.02■■□□□ 1.44
SDCBP-201ENST00000260130 KNDC1Q76NI1 1749 aa24.02■■□□□ 1.44
SDCBP-201ENST00000260130 TRAK1Q9UPV9 953 aa24.02■■□□□ 1.44
SDCBP-201ENST00000260130 PLEKHH1Q9ULM0 1364 aa24■■□□□ 1.43
SDCBP-201ENST00000260130 KIAA1210Q9ULL0 1709 aa24■■□□□ 1.43
SDCBP-201ENST00000260130 PRAM1Q96QH2 718 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms