RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
TRPM1-201ENST00000256552 CCAR2Q8N163 923 aaKnown RBP12.49□□□□□ -0.41
TRPM1-201ENST00000256552 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
TRPM1-201ENST00000256552 GOLGA6L19H0YKK7 550 aa12.49□□□□□ -0.41
TRPM1-201ENST00000256552 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-201ENST00000256552 APAF1O14727 1248 aa12.48□□□□□ -0.41
TRPM1-201ENST00000256552 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
TRPM1-201ENST00000256552 CCDC70Q6NSX1 233 aa12.48□□□□□ -0.41
TRPM1-201ENST00000256552 PANK1Q8TE04 598 aa12.48□□□□□ -0.41
TRPM1-201ENST00000256552 SKAP1Q86WV1 359 aa12.48□□□□□ -0.41
TRPM1-201ENST00000256552 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
TRPM1-201ENST00000256552 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
TRPM1-201ENST00000256552 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
TRPM1-201ENST00000256552 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
TRPM1-201ENST00000256552 BECN2A8MW95 431 aa12.46□□□□□ -0.41
TRPM1-201ENST00000256552 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
TRPM1-201ENST00000256552 DEF6Q9H4E7 631 aa12.46□□□□□ -0.42
TRPM1-201ENST00000256552 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
TRPM1-201ENST00000256552 HMMRO75330 724 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 MPNDQ8N594 471 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 ARGLU1Q9NWB6 273 aaPredicted RBP12.45□□□□□ -0.42
TRPM1-201ENST00000256552 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
TRPM1-201ENST00000256552 CUX2O14529 1486 aa12.44□□□□□ -0.42
TRPM1-201ENST00000256552 NUP155O75694 1391 aa12.43□□□□□ -0.42
TRPM1-201ENST00000256552 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 DHX37Q8IY37 1157 aaKnown RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
TRPM1-201ENST00000256552 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
TRPM1-201ENST00000256552 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
TRPM1-201ENST00000256552 DDX19BQ9UMR2 479 aa12.43□□□□□ -0.42
TRPM1-201ENST00000256552 RDXP35241 583 aaKnown RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-201ENST00000256552 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 ERICH4A6NGS2 130 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 CDR1P51861 262 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 TERF1P54274 439 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 GTF2A1P52655 376 aaPredicted RBP12.42□□□□□ -0.42
TRPM1-201ENST00000256552 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
TRPM1-201ENST00000256552 MBD3O95983 291 aa12.42□□□□□ -0.42
TRPM1-201ENST00000256552 REC8O95072 547 aa12.41□□□□□ -0.42
TRPM1-201ENST00000256552 OFD1O75665 1012 aa12.41□□□□□ -0.42
TRPM1-201ENST00000256552 MNS1Q8NEH6 495 aa12.41□□□□□ -0.42
TRPM1-201ENST00000256552 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
TRPM1-201ENST00000256552 CLSTN1O94985 981 aa12.4□□□□□ -0.42
TRPM1-201ENST00000256552 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRPM1-201ENST00000256552 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 FAM193AP78312 1265 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 WIZO95785 1651 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 DMTNQ08495 405 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 GPATCH11Q8N954 259 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 KIF21BO75037 1637 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 NPHP1O15259 732 aa12.39□□□□□ -0.43
TRPM1-201ENST00000256552 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
TRPM1-201ENST00000256552 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
TRPM1-201ENST00000256552 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
TRPM1-201ENST00000256552 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
TRPM1-201ENST00000256552 MCM5P33992 734 aa12.38□□□□□ -0.43
TRPM1-201ENST00000256552 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
TRPM1-201ENST00000256552 AK7Q96M32 723 aa12.37□□□□□ -0.43
TRPM1-201ENST00000256552 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
TRPM1-201ENST00000256552 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
TRPM1-201ENST00000256552 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
TRPM1-201ENST00000256552 CCDC112Q8NEF3 446 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
TRPM1-201ENST00000256552 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
TRPM1-201ENST00000256552 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
TRPM1-201ENST00000256552 CDC45O75419 566 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 BCAR3O75815 825 aa12.36□□□□□ -0.43
TRPM1-201ENST00000256552 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-201ENST00000256552 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 ZNF622Q969S3 477 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRPM1-201ENST00000256552 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 H3BQV1 296 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
TRPM1-201ENST00000256552 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
TRPM1-201ENST00000256552 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 HSP90B2PQ58FF3 399 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 NEFHP12036 1026 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 SAFB2Q14151 953 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRPM1-201ENST00000256552 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
TRPM1-201ENST00000256552 LEKR1Q6ZMV7 388 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 ANKRD30AQ9BXX3 1397 aa12.34□□□□□ -0.43
TRPM1-201ENST00000256552 PDE3AQ14432 1141 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms