RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
VRTN-201ENST00000256362 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
VRTN-201ENST00000256362 AFAP1Q8N556 730 aa15.01□□□□□ -0.01
VRTN-201ENST00000256362 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
VRTN-201ENST00000256362 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
VRTN-201ENST00000256362 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
VRTN-201ENST00000256362 BCL2L13Q9BXK5 485 aa14.99□□□□□ -0.01
VRTN-201ENST00000256362 COL17A1Q9UMD9 1497 aaPredicted RBP14.99□□□□□ -0.01
VRTN-201ENST00000256362 BECN1Q14457 450 aa14.98□□□□□ -0.01
VRTN-201ENST00000256362 UPF2Q9HAU5 1272 aaKnown RBP14.98□□□□□ -0.01
VRTN-201ENST00000256362 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
VRTN-201ENST00000256362 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
VRTN-201ENST00000256362 FAM43AQ8N2R8 423 aa14.97□□□□□ -0.01
VRTN-201ENST00000256362 RRAGDQ9NQL2 400 aaPredicted RBP14.97□□□□□ -0.01
VRTN-201ENST00000256362 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
VRTN-201ENST00000256362 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
VRTN-201ENST00000256362 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
VRTN-201ENST00000256362 ZMYND15Q9H091 742 aa14.96□□□□□ -0.01
VRTN-201ENST00000256362 MAGI2Q86UL8 1455 aa14.96□□□□□ -0.02
VRTN-201ENST00000256362 CHD1O14646 1710 aa14.96□□□□□ -0.02
VRTN-201ENST00000256362 CFAP70Q5T0N1 1121 aa14.96□□□□□ -0.02
VRTN-201ENST00000256362 COG6Q9Y2V7 657 aa14.96□□□□□ -0.02
VRTN-201ENST00000256362 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
VRTN-201ENST00000256362 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
VRTN-201ENST00000256362 TRIM44Q96DX7 344 aaPredicted RBP14.94□□□□□ -0.02
VRTN-201ENST00000256362 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
VRTN-201ENST00000256362 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
VRTN-201ENST00000256362 GOLGA6L3A6NEY3 463 aa14.93□□□□□ -0.02
VRTN-201ENST00000256362 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
VRTN-201ENST00000256362 C8orf34Q49A92 452 aa14.93□□□□□ -0.02
VRTN-201ENST00000256362 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
VRTN-201ENST00000256362 PANK2Q9BZ23 570 aa14.93□□□□□ -0.02
VRTN-201ENST00000256362 E9PCH4 1651 aa14.93□□□□□ -0.02
VRTN-201ENST00000256362 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
VRTN-201ENST00000256362 KIF3BO15066 747 aa14.92□□□□□ -0.02
VRTN-201ENST00000256362 IGHDP01880 384 aa14.92□□□□□ -0.02
VRTN-201ENST00000256362 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
VRTN-201ENST00000256362 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
VRTN-201ENST00000256362 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
VRTN-201ENST00000256362 L1TD1Q5T7N2 865 aaKnown RBP14.91□□□□□ -0.02
VRTN-201ENST00000256362 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
VRTN-201ENST00000256362 GPRASP1Q5JY77 1395 aa14.91□□□□□ -0.02
VRTN-201ENST00000256362 SPAG9O60271 1321 aaKnown RBP14.9□□□□□ -0.02
VRTN-201ENST00000256362 EFCAB2Q5VUJ9 269 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 ARHGEF5Q12774 1597 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 ZMYM4Q5VZL5 1548 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 SAFB2Q14151 953 aaKnown RBP eCLIP14.89□□□□□ -0.03
VRTN-201ENST00000256362 TTC37Q6PGP7 1564 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 SEC24BO95487 1268 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
VRTN-201ENST00000256362 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
VRTN-201ENST00000256362 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
VRTN-201ENST00000256362 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
VRTN-201ENST00000256362 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
VRTN-201ENST00000256362 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
VRTN-201ENST00000256362 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
VRTN-201ENST00000256362 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
VRTN-201ENST00000256362 PRDM15P57071 1507 aaPredicted RBP14.86□□□□□ -0.03
VRTN-201ENST00000256362 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
VRTN-201ENST00000256362 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
VRTN-201ENST00000256362 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
VRTN-201ENST00000256362 NCLP19338 710 aaKnown RBP14.85□□□□□ -0.03
VRTN-201ENST00000256362 CENPJQ9HC77 1338 aaPredicted RBP14.84□□□□□ -0.03
VRTN-201ENST00000256362 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
VRTN-201ENST00000256362 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
VRTN-201ENST00000256362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.84□□□□□ -0.03
VRTN-201ENST00000256362 MORC1Q86VD1 984 aa14.83□□□□□ -0.03
VRTN-201ENST00000256362 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
VRTN-201ENST00000256362 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.04
VRTN-201ENST00000256362 TPRNQ4KMQ1 711 aa14.83□□□□□ -0.04
VRTN-201ENST00000256362 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
VRTN-201ENST00000256362 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
VRTN-201ENST00000256362 E9PSI1 815 aa14.82□□□□□ -0.04
VRTN-201ENST00000256362 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
VRTN-201ENST00000256362 XRCC6P12956 609 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRTN-201ENST00000256362 RLBP1P12271 317 aa14.79□□□□□ -0.04
VRTN-201ENST00000256362 ABCC2Q92887 1545 aa14.79□□□□□ -0.04
VRTN-201ENST00000256362 GGT6Q6P531 493 aa14.79□□□□□ -0.04
VRTN-201ENST00000256362 TCP11L2Q8N4U5 519 aa14.79□□□□□ -0.04
VRTN-201ENST00000256362 NKTRP30414 1462 aaKnown RBP14.78□□□□□ -0.04
VRTN-201ENST00000256362 UGGT1Q9NYU2 1555 aa14.78□□□□□ -0.04
VRTN-201ENST00000256362 ASXL1Q8IXJ9 1541 aa14.78□□□□□ -0.04
VRTN-201ENST00000256362 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
VRTN-201ENST00000256362 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.05
VRTN-201ENST00000256362 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
VRTN-201ENST00000256362 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
VRTN-201ENST00000256362 MTHFSP49914 203 aa14.76□□□□□ -0.05
VRTN-201ENST00000256362 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.05
VRTN-201ENST00000256362 PCDHB15Q9Y5E8 787 aa14.76□□□□□ -0.05
VRTN-201ENST00000256362 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
VRTN-201ENST00000256362 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
VRTN-201ENST00000256362 DUOX2Q9NRD8 1548 aa14.76□□□□□ -0.05
VRTN-201ENST00000256362 SCAPERQ9BY12 1400 aa14.76□□□□□ -0.05
VRTN-201ENST00000256362 EIF3AQ14152 1382 aaKnown RBP14.76□□□□□ -0.05
VRTN-201ENST00000256362 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
VRTN-201ENST00000256362 TRAK2O60296 914 aa14.75□□□□□ -0.05
VRTN-201ENST00000256362 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
VRTN-201ENST00000256362 STK26Q9P289 416 aa14.75□□□□□ -0.05
VRTN-201ENST00000256362 UNC13BO14795 1591 aa14.75□□□□□ -0.05
VRTN-201ENST00000256362 ATP10AO60312 1499 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms